RNA–Protein interactions for RNA: ENST00000344429.9

NOVA1-201, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 2 BASIC

Gene NOVA1, Length 896 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-201ENST00000344429 AEBP2Q6ZN18 517 aaPredicted RBP26.62■■□□□ 1.85
NOVA1-201ENST00000344429 CHIC1Q5VXU3 224 aa24.89■■□□□ 1.58
NOVA1-201ENST00000344429 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.49
NOVA1-201ENST00000344429 SENP3Q9H4L4 574 aaPredicted RBP22.85■■□□□ 1.25
NOVA1-201ENST00000344429 PHF23Q9BUL5 403 aaPredicted RBP22.44■■□□□ 1.18
NOVA1-201ENST00000344429 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
NOVA1-201ENST00000344429 POTEDQ86YR6 584 aa21.61■■□□□ 1.05
NOVA1-201ENST00000344429 ABCC9O60706 1549 aa21.56■■□□□ 1.04
NOVA1-201ENST00000344429 FOXD1Q16676 465 aa21.37■■□□□ 1.01
NOVA1-201ENST00000344429 RB1CC1Q8TDY2 1594 aa20.68■□□□□ 0.9
NOVA1-201ENST00000344429 NACADO15069 1562 aa20.6■□□□□ 0.89
NOVA1-201ENST00000344429 MYO15BQ96JP2 1530 aa20.44■□□□□ 0.86
NOVA1-201ENST00000344429 MSH5O43196 834 aa20.33■□□□□ 0.85
NOVA1-201ENST00000344429 UNC13AQ9UPW8 1703 aa20.24■□□□□ 0.83
NOVA1-201ENST00000344429 ZCCHC6Q5VYS8 1495 aaKnown RBP20.23■□□□□ 0.83
NOVA1-201ENST00000344429 DCAF1Q9Y4B6 1507 aa20.2■□□□□ 0.82
NOVA1-201ENST00000344429 DCAF8L2P0C7V8 631 aa20.18■□□□□ 0.82
NOVA1-201ENST00000344429 BICRAQ9NZM4 1560 aa20.1■□□□□ 0.81
NOVA1-201ENST00000344429 DNAJC5BQ9UF47 199 aa20.09■□□□□ 0.81
NOVA1-201ENST00000344429 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
NOVA1-201ENST00000344429 SHROOM4Q9ULL8 1493 aa19.95■□□□□ 0.78
NOVA1-201ENST00000344429 SCRIBQ14160 1630 aa19.8■□□□□ 0.76
NOVA1-201ENST00000344429 PIAS4Q8N2W9 510 aaPredicted RBP19.76■□□□□ 0.75
NOVA1-201ENST00000344429 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
NOVA1-201ENST00000344429 CC2D2AQ9P2K1 1620 aa19.55■□□□□ 0.72
NOVA1-201ENST00000344429 CECR2Q9BXF3 1484 aa19.45■□□□□ 0.7
NOVA1-201ENST00000344429 PPP6R1Q9UPN7 881 aa19.4■□□□□ 0.7
NOVA1-201ENST00000344429 PLPPR3Q6T4P5 718 aa19.28■□□□□ 0.68
NOVA1-201ENST00000344429 ADRA2BP18089 450 aa19.26■□□□□ 0.67
NOVA1-201ENST00000344429 NCAPD3P42695 1498 aa19■□□□□ 0.63
NOVA1-201ENST00000344429 SMARCA4P51532 1647 aa18.96■□□□□ 0.63
NOVA1-201ENST00000344429 ATAD2BQ9ULI0 1458 aa18.92■□□□□ 0.62
NOVA1-201ENST00000344429 HMGXB3Q12766 1538 aa18.91■□□□□ 0.62
NOVA1-201ENST00000344429 SMARCA2P51531 1590 aa18.91■□□□□ 0.62
NOVA1-201ENST00000344429 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.62
NOVA1-201ENST00000344429 PEG3Q9GZU2 1588 aa18.86■□□□□ 0.61
NOVA1-201ENST00000344429 BAZ1BQ9UIG0 1483 aaKnown RBP18.72■□□□□ 0.59
NOVA1-201ENST00000344429 MROH2BQ7Z745 1585 aa18.71■□□□□ 0.59
NOVA1-201ENST00000344429 CUX2O14529 1486 aa18.65■□□□□ 0.58
NOVA1-201ENST00000344429 ERCC6Q03468 1493 aa18.61■□□□□ 0.57
NOVA1-201ENST00000344429 NESP48681 1621 aa18.57■□□□□ 0.56
NOVA1-201ENST00000344429 LAMC3Q9Y6N6 1575 aa18.57■□□□□ 0.56
NOVA1-201ENST00000344429 WIZO95785 1651 aa18.48■□□□□ 0.55
NOVA1-201ENST00000344429 THOC2Q8NI27 1593 aaKnown RBP18.47■□□□□ 0.55
NOVA1-201ENST00000344429 KIF21AQ7Z4S6 1674 aa18.41■□□□□ 0.54
NOVA1-201ENST00000344429 DNAJC5Q9H3Z4 198 aa18.4■□□□□ 0.54
NOVA1-201ENST00000344429 PDS5BQ9NTI5 1447 aa18.39■□□□□ 0.53
NOVA1-201ENST00000344429 CADPSQ9ULU8 1353 aa18.37■□□□□ 0.53
NOVA1-201ENST00000344429 RSF1Q96T23 1441 aaPredicted RBP18.36■□□□□ 0.53
NOVA1-201ENST00000344429 TOP2AP11388 1531 aaKnown RBP18.32■□□□□ 0.52
NOVA1-201ENST00000344429 MRC2Q9UBG0 1479 aa18.25■□□□□ 0.51
NOVA1-201ENST00000344429 WDR62O43379 1518 aa18.24■□□□□ 0.51
NOVA1-201ENST00000344429 CFTRP13569 1480 aa18.23■□□□□ 0.51
NOVA1-201ENST00000344429 CEP164Q9UPV0 1460 aa18.18■□□□□ 0.5
NOVA1-201ENST00000344429 FANCD2Q9BXW9 1451 aa18.16■□□□□ 0.5
NOVA1-201ENST00000344429 PRDM2Q13029 1718 aa18.13■□□□□ 0.49
NOVA1-201ENST00000344429 CCDC88BA6NC98 1476 aa18.04■□□□□ 0.48
NOVA1-201ENST00000344429 URB2Q14146 1524 aaKnown RBP18.03■□□□□ 0.48
NOVA1-201ENST00000344429 DMRT2Q9Y5R5 561 aa18■□□□□ 0.47
NOVA1-201ENST00000344429 MAPK8IP2Q13387 824 aaPredicted RBP17.93■□□□□ 0.46
NOVA1-201ENST00000344429 CACNB1Q02641 598 aaPredicted RBP17.88■□□□□ 0.45
NOVA1-201ENST00000344429 ABCC8Q09428 1581 aa17.85■□□□□ 0.45
NOVA1-201ENST00000344429 TOPBP1Q92547 1522 aa17.85■□□□□ 0.45
NOVA1-201ENST00000344429 IFT140Q96RY7 1462 aa17.83■□□□□ 0.45
NOVA1-201ENST00000344429 DNMBPQ6XZF7 1577 aa17.83■□□□□ 0.44
NOVA1-201ENST00000344429 ZNF608Q9ULD9 1512 aaPredicted RBP17.75■□□□□ 0.43
NOVA1-201ENST00000344429 TARBP1Q13395 1621 aaKnown RBP17.72■□□□□ 0.43
NOVA1-201ENST00000344429 EIF4G3O43432 1585 aaKnown RBP17.72■□□□□ 0.43
NOVA1-201ENST00000344429 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
NOVA1-201ENST00000344429 OSCARQ8IYS5 282 aa17.68■□□□□ 0.42
NOVA1-201ENST00000344429 POLA1P09884 1462 aaPredicted RBP17.68■□□□□ 0.42
NOVA1-201ENST00000344429 WDR97A6NE52 1622 aa17.63■□□□□ 0.41
NOVA1-201ENST00000344429 CUX1P39880 1505 aa17.58■□□□□ 0.41
NOVA1-201ENST00000344429 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.4
NOVA1-201ENST00000344429 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
NOVA1-201ENST00000344429 RAD54L2Q9Y4B4 1467 aa17.55■□□□□ 0.4
NOVA1-201ENST00000344429 CHD1O14646 1710 aa17.55■□□□□ 0.4
NOVA1-201ENST00000344429 SOGA1O94964 1423 aa17.54■□□□□ 0.4
NOVA1-201ENST00000344429 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
NOVA1-201ENST00000344429 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
NOVA1-201ENST00000344429 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
NOVA1-201ENST00000344429 ARHGEF11O15085 1522 aa17.49■□□□□ 0.39
NOVA1-201ENST00000344429 TRIM41Q8WV44 630 aa17.49■□□□□ 0.39
NOVA1-201ENST00000344429 MAGI1Q96QZ7 1491 aaPredicted RBP17.45■□□□□ 0.38
NOVA1-201ENST00000344429 TDRD9Q8NDG6 1382 aaKnown RBP17.45■□□□□ 0.38
NOVA1-201ENST00000344429 SNAPC4Q5SXM2 1469 aa17.44■□□□□ 0.38
NOVA1-201ENST00000344429 SUPT5HO00267 1087 aaKnown RBP17.43■□□□□ 0.38
NOVA1-201ENST00000344429 GRIN2BQ13224 1484 aa17.43■□□□□ 0.38
NOVA1-201ENST00000344429 ABCA10Q8WWZ4 1543 aa17.42■□□□□ 0.38
NOVA1-201ENST00000344429 ABCA5Q8WWZ7 1642 aa17.41■□□□□ 0.38
NOVA1-201ENST00000344429 PBRM1Q86U86 1689 aa17.4■□□□□ 0.38
NOVA1-201ENST00000344429 CLASP1Q7Z460 1538 aa17.4■□□□□ 0.38
NOVA1-201ENST00000344429 BIVM-ERCC5R4GMW8 1640 aa17.39■□□□□ 0.38
NOVA1-201ENST00000344429 TOP2BQ02880 1626 aa17.37■□□□□ 0.37
NOVA1-201ENST00000344429 SYNJ2O15056 1496 aa17.37■□□□□ 0.37
NOVA1-201ENST00000344429 GAPVD1Q14C86 1478 aa17.36■□□□□ 0.37
NOVA1-201ENST00000344429 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
NOVA1-201ENST00000344429 ARAP1Q96P48 1450 aa17.32■□□□□ 0.36
NOVA1-201ENST00000344429 WRNQ14191 1432 aaPredicted RBP eCLIP17.31■□□□□ 0.36
NOVA1-201ENST00000344429 FBLN2P98095 1184 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms