RNA–Protein interactions for RNA: ENST00000343267.7

APOD-201, Transcript of apolipoprotein D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene APOD, Length 1,130 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOD-201ENST00000343267 NISCHQ9Y2I1 1504 aa31.19■■■□□ 2.58
APOD-201ENST00000343267 CCDC180Q9P1Z9 1646 aa27.22■■□□□ 1.95
APOD-201ENST00000343267 ZCCHC6Q5VYS8 1495 aaKnown RBP26.25■■□□□ 1.79
APOD-201ENST00000343267 DCAF1Q9Y4B6 1507 aa25.88■■□□□ 1.73
APOD-201ENST00000343267 MYO15BQ96JP2 1530 aa25.51■■□□□ 1.67
APOD-201ENST00000343267 DCAF8L2P0C7V8 631 aa25.46■■□□□ 1.67
APOD-201ENST00000343267 SHROOM4Q9ULL8 1493 aa25.39■■□□□ 1.65
APOD-201ENST00000343267 ABCC9O60706 1549 aa25.34■■□□□ 1.65
APOD-201ENST00000343267 NACADO15069 1562 aa25.24■■□□□ 1.63
APOD-201ENST00000343267 RB1CC1Q8TDY2 1594 aa24.96■■□□□ 1.59
APOD-201ENST00000343267 SCRIBQ14160 1630 aa24.9■■□□□ 1.58
APOD-201ENST00000343267 UNC13AQ9UPW8 1703 aa24.54■■□□□ 1.52
APOD-201ENST00000343267 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
APOD-201ENST00000343267 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
APOD-201ENST00000343267 RSF1Q96T23 1441 aaPredicted RBP24.24■■□□□ 1.47
APOD-201ENST00000343267 BICRAQ9NZM4 1560 aa24.2■■□□□ 1.47
APOD-201ENST00000343267 CECR2Q9BXF3 1484 aa24.16■■□□□ 1.46
APOD-201ENST00000343267 MROH2BQ7Z745 1585 aa24.08■■□□□ 1.44
APOD-201ENST00000343267 BAZ1AQ9NRL2 1556 aaPredicted RBP24.08■■□□□ 1.44
APOD-201ENST00000343267 SMARCA4P51532 1647 aa23.95■■□□□ 1.43
APOD-201ENST00000343267 WIZO95785 1651 aa23.92■■□□□ 1.42
APOD-201ENST00000343267 PABPN1Q86U42 306 aaKnown RBP eCLIP23.88■■□□□ 1.41
APOD-201ENST00000343267 CHIC1Q5VXU3 224 aa23.87■■□□□ 1.41
APOD-201ENST00000343267 PEG3Q9GZU2 1588 aa23.71■■□□□ 1.39
APOD-201ENST00000343267 TOP2AP11388 1531 aaKnown RBP23.7■■□□□ 1.38
APOD-201ENST00000343267 SMARCA2P51531 1590 aa23.5■■□□□ 1.35
APOD-201ENST00000343267 ATAD2BQ9ULI0 1458 aa23.47■■□□□ 1.35
APOD-201ENST00000343267 EIF4G1Q04637 1599 aaKnown RBP23.42■■□□□ 1.34
APOD-201ENST00000343267 CCDC88BA6NC98 1476 aa23.42■■□□□ 1.34
APOD-201ENST00000343267 BAZ1BQ9UIG0 1483 aaKnown RBP23.32■■□□□ 1.32
APOD-201ENST00000343267 HMGXB3Q12766 1538 aa23.28■■□□□ 1.32
APOD-201ENST00000343267 NCAPD3P42695 1498 aa23.26■■□□□ 1.31
APOD-201ENST00000343267 TRIM41Q8WV44 630 aa23.11■■□□□ 1.29
APOD-201ENST00000343267 CC2D2AQ9P2K1 1620 aa23.03■■□□□ 1.28
APOD-201ENST00000343267 ABCC8Q09428 1581 aa22.95■■□□□ 1.26
APOD-201ENST00000343267 PRDM2Q13029 1718 aa22.84■■□□□ 1.25
APOD-201ENST00000343267 WRNQ14191 1432 aaPredicted RBP eCLIP22.79■■□□□ 1.24
APOD-201ENST00000343267 CFTRP13569 1480 aa22.79■■□□□ 1.24
APOD-201ENST00000343267 SYNJ1O43426 1573 aa22.72■■□□□ 1.23
APOD-201ENST00000343267 LOC105371045A0A1W2PR82 267 aa22.72■■□□□ 1.23
APOD-201ENST00000343267 BIVM-ERCC5R4GMW8 1640 aa22.68■■□□□ 1.22
APOD-201ENST00000343267 TOP2BQ02880 1626 aa22.66■■□□□ 1.22
APOD-201ENST00000343267 EEA1Q15075 1411 aa22.65■■□□□ 1.22
APOD-201ENST00000343267 CADPSQ9ULU8 1353 aa22.63■■□□□ 1.21
APOD-201ENST00000343267 FAM9AQ8IZU1 332 aaPredicted RBP22.6■■□□□ 1.21
APOD-201ENST00000343267 SOGA1O94964 1423 aa22.54■■□□□ 1.2
APOD-201ENST00000343267 CUX1P39880 1505 aa22.51■■□□□ 1.19
APOD-201ENST00000343267 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
APOD-201ENST00000343267 RUSC2Q8N2Y8 1516 aa22.46■■□□□ 1.19
APOD-201ENST00000343267 CSRNP3Q8WYN3 585 aa22.42■■□□□ 1.18
APOD-201ENST00000343267 FANCD2Q9BXW9 1451 aa22.38■■□□□ 1.17
APOD-201ENST00000343267 KIF21BO75037 1637 aa22.37■■□□□ 1.17
APOD-201ENST00000343267 NESP48681 1621 aa22.33■■□□□ 1.17
APOD-201ENST00000343267 GOLGA3Q08378 1498 aa22.29■■□□□ 1.16
APOD-201ENST00000343267 CEP164Q9UPV0 1460 aa22.28■■□□□ 1.16
APOD-201ENST00000343267 DNMBPQ6XZF7 1577 aa22.28■■□□□ 1.16
APOD-201ENST00000343267 TNIKQ9UKE5 1360 aa22.27■■□□□ 1.16
APOD-201ENST00000343267 DNAJC5BQ9UF47 199 aa22.23■■□□□ 1.15
APOD-201ENST00000343267 PDS5BQ9NTI5 1447 aa22.22■■□□□ 1.15
APOD-201ENST00000343267 KIF27Q86VH2 1401 aa22.21■■□□□ 1.15
APOD-201ENST00000343267 FGD5Q6ZNL6 1462 aa22.21■■□□□ 1.15
APOD-201ENST00000343267 EHMT2Q96KQ7 1210 aa22.19■■□□□ 1.14
APOD-201ENST00000343267 TOPBP1Q92547 1522 aa22.19■■□□□ 1.14
APOD-201ENST00000343267 ERICH3Q5RHP9 1530 aa22.17■■□□□ 1.14
APOD-201ENST00000343267 KIF21AQ7Z4S6 1674 aa22.17■■□□□ 1.14
APOD-201ENST00000343267 PRXQ9BXM0 1461 aa22.14■■□□□ 1.13
APOD-201ENST00000343267 CEP162Q5TB80 1403 aa22.12■■□□□ 1.13
APOD-201ENST00000343267 URB2Q14146 1524 aaKnown RBP22.11■■□□□ 1.13
APOD-201ENST00000343267 RAPGEF2Q9Y4G8 1499 aa22.09■■□□□ 1.13
APOD-201ENST00000343267 CUX2O14529 1486 aa22.08■■□□□ 1.12
APOD-201ENST00000343267 POLA1P09884 1462 aaPredicted RBP22.08■■□□□ 1.12
APOD-201ENST00000343267 UBTFP17480 764 aaKnown RBP22.07■■□□□ 1.12
APOD-201ENST00000343267 ABCA10Q8WWZ4 1543 aa22.06■■□□□ 1.12
APOD-201ENST00000343267 WDR97A6NE52 1622 aa22.05■■□□□ 1.12
APOD-201ENST00000343267 IGF1RP08069 1367 aa21.99■■□□□ 1.11
APOD-201ENST00000343267 RAD54L2Q9Y4B4 1467 aa21.97■■□□□ 1.11
APOD-201ENST00000343267 MRC2Q9UBG0 1479 aa21.94■■□□□ 1.1
APOD-201ENST00000343267 TRIM26Q12899 539 aaPredicted RBP21.92■■□□□ 1.1
APOD-201ENST00000343267 CLIP1P30622 1438 aa21.9■■□□□ 1.1
APOD-201ENST00000343267 ABCA5Q8WWZ7 1642 aa21.9■■□□□ 1.1
APOD-201ENST00000343267 CUL7Q14999 1698 aa21.89■■□□□ 1.1
APOD-201ENST00000343267 TARBP1Q13395 1621 aaKnown RBP21.89■■□□□ 1.09
APOD-201ENST00000343267 PCGF6Q9BYE7 350 aa21.87■■□□□ 1.09
APOD-201ENST00000343267 CARMIL1Q5VZK9 1371 aa21.87■■□□□ 1.09
APOD-201ENST00000343267 WDR62O43379 1518 aa21.85■■□□□ 1.09
APOD-201ENST00000343267 VPS8Q8N3P4 1428 aa21.78■■□□□ 1.08
APOD-201ENST00000343267 GAPVD1Q14C86 1478 aa21.77■■□□□ 1.07
APOD-201ENST00000343267 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
APOD-201ENST00000343267 PBRM1Q86U86 1689 aa21.73■■□□□ 1.07
APOD-201ENST00000343267 ARAP1Q96P48 1450 aa21.71■■□□□ 1.07
APOD-201ENST00000343267 IFT140Q96RY7 1462 aa21.71■■□□□ 1.07
APOD-201ENST00000343267 CTTNBP2Q8WZ74 1663 aa21.7■■□□□ 1.06
APOD-201ENST00000343267 TDRD9Q8NDG6 1382 aaKnown RBP21.7■■□□□ 1.06
APOD-201ENST00000343267 ERCC6Q03468 1493 aa21.7■■□□□ 1.06
APOD-201ENST00000343267 ARHGAP35Q9NRY4 1499 aa21.66■■□□□ 1.06
APOD-201ENST00000343267 GRIN2BQ13224 1484 aa21.58■■□□□ 1.05
APOD-201ENST00000343267 ADAMTS12P58397 1594 aa21.57■■□□□ 1.04
APOD-201ENST00000343267 EFCAB5A4FU69 1503 aa21.56■■□□□ 1.04
APOD-201ENST00000343267 PPARGC1BQ86YN6 1023 aaKnown RBP21.56■■□□□ 1.04
APOD-201ENST00000343267 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms