RNA–Protein interactions for RNA: ENST00000341952.8

CCDC62-202, Transcript of coiled-coil domain containing 62, humanhuman

TSL 2

Gene CCDC62, Length 2,479 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62-202ENST00000341952 NISCHQ9Y2I1 1504 aa52.01■■■■■ 5.92
CCDC62-202ENST00000341952 CCDC180Q9P1Z9 1646 aa44.97■■■■■ 4.79
CCDC62-202ENST00000341952 ZCCHC6Q5VYS8 1495 aaKnown RBP43.78■■■■■ 4.6
CCDC62-202ENST00000341952 SHROOM4Q9ULL8 1493 aa43.05■■■■■ 4.48
CCDC62-202ENST00000341952 DCAF8L2P0C7V8 631 aa43■■■■■ 4.47
CCDC62-202ENST00000341952 DCAF1Q9Y4B6 1507 aa42.85■■■■■ 4.45
CCDC62-202ENST00000341952 ABCC9O60706 1549 aa42.33■■■■■ 4.37
CCDC62-202ENST00000341952 MYO15BQ96JP2 1530 aa42.11■■■■■ 4.33
CCDC62-202ENST00000341952 NACADO15069 1562 aa41.77■■■■■ 4.28
CCDC62-202ENST00000341952 SCRIBQ14160 1630 aa41.66■■■■■ 4.26
CCDC62-202ENST00000341952 SUPT5HO00267 1087 aaKnown RBP41.64■■■■■ 4.26
CCDC62-202ENST00000341952 RB1CC1Q8TDY2 1594 aa41.32■■■■■ 4.21
CCDC62-202ENST00000341952 UNC13AQ9UPW8 1703 aa40.76■■■■■ 4.12
CCDC62-202ENST00000341952 RSF1Q96T23 1441 aaPredicted RBP40.61■■■■■ 4.09
CCDC62-202ENST00000341952 CECR2Q9BXF3 1484 aa40.54■■■■■ 4.08
CCDC62-202ENST00000341952 MROH2BQ7Z745 1585 aa40.31■■■■■ 4.04
CCDC62-202ENST00000341952 BICRAQ9NZM4 1560 aa40.25■■■■■ 4.03
CCDC62-202ENST00000341952 PABPN1Q86U42 306 aaKnown RBP eCLIP40.11■■■■■ 4.01
CCDC62-202ENST00000341952 CHIC1Q5VXU3 224 aa40.07■■■■■ 4.01
CCDC62-202ENST00000341952 BAZ1AQ9NRL2 1556 aaPredicted RBP40.05■■■■■ 4
CCDC62-202ENST00000341952 WIZO95785 1651 aa40.04■■■■■ 4
CCDC62-202ENST00000341952 SMARCA4P51532 1647 aa39.88■■■■□ 3.97
CCDC62-202ENST00000341952 TOP2AP11388 1531 aaKnown RBP39.46■■■■□ 3.91
CCDC62-202ENST00000341952 PEG3Q9GZU2 1588 aa39.3■■■■□ 3.88
CCDC62-202ENST00000341952 SMARCA2P51531 1590 aa39.2■■■■□ 3.87
CCDC62-202ENST00000341952 CCDC88BA6NC98 1476 aa39.18■■■■□ 3.86
CCDC62-202ENST00000341952 ATAD2BQ9ULI0 1458 aa39.11■■■■□ 3.85
CCDC62-202ENST00000341952 EIF4G1Q04637 1599 aaKnown RBP39.09■■■■□ 3.85
CCDC62-202ENST00000341952 TRIM41Q8WV44 630 aa38.98■■■■□ 3.83
CCDC62-202ENST00000341952 BAZ1BQ9UIG0 1483 aaKnown RBP38.88■■■■□ 3.81
CCDC62-202ENST00000341952 LOC105371045A0A1W2PR82 267 aa38.7■■■■□ 3.79
CCDC62-202ENST00000341952 NCAPD3P42695 1498 aa38.62■■■■□ 3.77
CCDC62-202ENST00000341952 ABCC8Q09428 1581 aa38.62■■■■□ 3.77
CCDC62-202ENST00000341952 HMGXB3Q12766 1538 aa38.56■■■■□ 3.76
CCDC62-202ENST00000341952 FAM9AQ8IZU1 332 aaPredicted RBP38.46■■■■□ 3.75
CCDC62-202ENST00000341952 CC2D2AQ9P2K1 1620 aa38.27■■■■□ 3.72
CCDC62-202ENST00000341952 WRNQ14191 1432 aaPredicted RBP eCLIP38.16■■■■□ 3.7
CCDC62-202ENST00000341952 SYNJ1O43426 1573 aa38.07■■■■□ 3.68
CCDC62-202ENST00000341952 EHMT2Q96KQ7 1210 aa38.02■■■■□ 3.68
CCDC62-202ENST00000341952 SOGA1O94964 1423 aa37.99■■■■□ 3.67
CCDC62-202ENST00000341952 CFTRP13569 1480 aa37.94■■■■□ 3.66
CCDC62-202ENST00000341952 RUSC2Q8N2Y8 1516 aa37.88■■■■□ 3.66
CCDC62-202ENST00000341952 TOP2BQ02880 1626 aa37.78■■■■□ 3.64
CCDC62-202ENST00000341952 PRDM2Q13029 1718 aa37.75■■■■□ 3.63
CCDC62-202ENST00000341952 EEA1Q15075 1411 aa37.72■■■■□ 3.63
CCDC62-202ENST00000341952 BIVM-ERCC5R4GMW8 1640 aa37.71■■■■□ 3.63
CCDC62-202ENST00000341952 CADPSQ9ULU8 1353 aa37.7■■■■□ 3.63
CCDC62-202ENST00000341952 CSRNP3Q8WYN3 585 aa37.66■■■■□ 3.62
CCDC62-202ENST00000341952 CUX1P39880 1505 aa37.62■■■■□ 3.61
CCDC62-202ENST00000341952 DNAJC5BQ9UF47 199 aa37.46■■■■□ 3.59
CCDC62-202ENST00000341952 PCGF6Q9BYE7 350 aa37.41■■■■□ 3.58
CCDC62-202ENST00000341952 NESP48681 1621 aa37.39■■■■□ 3.58
CCDC62-202ENST00000341952 TNIKQ9UKE5 1360 aa37.34■■■■□ 3.57
CCDC62-202ENST00000341952 GOLGA3Q08378 1498 aa37.33■■■■□ 3.57
CCDC62-202ENST00000341952 FANCD2Q9BXW9 1451 aa37.31■■■■□ 3.56
CCDC62-202ENST00000341952 KIF21BO75037 1637 aa37.31■■■■□ 3.56
CCDC62-202ENST00000341952 CEP164Q9UPV0 1460 aa37.27■■■■□ 3.56
CCDC62-202ENST00000341952 UBTFP17480 764 aaKnown RBP37.26■■■■□ 3.56
CCDC62-202ENST00000341952 CEP162Q5TB80 1403 aa37.24■■■■□ 3.55
CCDC62-202ENST00000341952 LAMC3Q9Y6N6 1575 aa37.19■■■■□ 3.54
CCDC62-202ENST00000341952 RAPGEF2Q9Y4G8 1499 aa37.16■■■■□ 3.54
CCDC62-202ENST00000341952 FGD5Q6ZNL6 1462 aa37.11■■■■□ 3.53
CCDC62-202ENST00000341952 TRIM26Q12899 539 aaPredicted RBP37.11■■■■□ 3.53
CCDC62-202ENST00000341952 KIF27Q86VH2 1401 aa37.09■■■■□ 3.53
CCDC62-202ENST00000341952 PRXQ9BXM0 1461 aa37.03■■■■□ 3.52
CCDC62-202ENST00000341952 DNMBPQ6XZF7 1577 aa37.02■■■■□ 3.52
CCDC62-202ENST00000341952 TOPBP1Q92547 1522 aa36.98■■■■□ 3.51
CCDC62-202ENST00000341952 CUX2O14529 1486 aa36.96■■■■□ 3.51
CCDC62-202ENST00000341952 ERICH3Q5RHP9 1530 aa36.94■■■■□ 3.5
CCDC62-202ENST00000341952 PPARGC1BQ86YN6 1023 aaKnown RBP36.91■■■■□ 3.5
CCDC62-202ENST00000341952 PDS5BQ9NTI5 1447 aa36.88■■■■□ 3.49
CCDC62-202ENST00000341952 KIF21AQ7Z4S6 1674 aa36.88■■■■□ 3.49
CCDC62-202ENST00000341952 URB2Q14146 1524 aaKnown RBP36.87■■■■□ 3.49
CCDC62-202ENST00000341952 POLA1P09884 1462 aaPredicted RBP36.86■■■■□ 3.49
CCDC62-202ENST00000341952 RAD54L2Q9Y4B4 1467 aa36.83■■■■□ 3.49
CCDC62-202ENST00000341952 IGF1RP08069 1367 aa36.82■■■■□ 3.48
CCDC62-202ENST00000341952 CLIP1P30622 1438 aa36.81■■■■□ 3.48
CCDC62-202ENST00000341952 ABCA10Q8WWZ4 1543 aa36.73■■■■□ 3.47
CCDC62-202ENST00000341952 RANGAP1P46060 587 aaPredicted RBP36.68■■■■□ 3.46
CCDC62-202ENST00000341952 HRCP23327 699 aa36.65■■■■□ 3.46
CCDC62-202ENST00000341952 CARMIL1Q5VZK9 1371 aa36.6■■■■□ 3.45
CCDC62-202ENST00000341952 WDR97A6NE52 1622 aa36.6■■■■□ 3.45
CCDC62-202ENST00000341952 VPS8Q8N3P4 1428 aa36.54■■■■□ 3.44
CCDC62-202ENST00000341952 TTBK1Q5TCY1 1321 aaPredicted RBP36.49■■■■□ 3.43
CCDC62-202ENST00000341952 ARAP1Q96P48 1450 aa36.43■■■■□ 3.42
CCDC62-202ENST00000341952 TDRD9Q8NDG6 1382 aaKnown RBP36.42■■■■□ 3.42
CCDC62-202ENST00000341952 ABCA5Q8WWZ7 1642 aa36.41■■■■□ 3.42
CCDC62-202ENST00000341952 MRC2Q9UBG0 1479 aa36.41■■■■□ 3.42
CCDC62-202ENST00000341952 TARBP1Q13395 1621 aaKnown RBP36.4■■■■□ 3.42
CCDC62-202ENST00000341952 CUL7Q14999 1698 aa36.35■■■■□ 3.41
CCDC62-202ENST00000341952 ARHGAP35Q9NRY4 1499 aa36.34■■■■□ 3.41
CCDC62-202ENST00000341952 GAPVD1Q14C86 1478 aa36.31■■■■□ 3.4
CCDC62-202ENST00000341952 WDR62O43379 1518 aa36.21■■■■□ 3.39
CCDC62-202ENST00000341952 APLP2Q06481 763 aa36.13■■■■□ 3.37
CCDC62-202ENST00000341952 ERCC6Q03468 1493 aa36.12■■■■□ 3.37
CCDC62-202ENST00000341952 AQRO60306 1485 aaKnown RBP eCLIP36.11■■■■□ 3.37
CCDC62-202ENST00000341952 CTTNBP2Q8WZ74 1663 aa36.1■■■■□ 3.37
CCDC62-202ENST00000341952 PBRM1Q86U86 1689 aa36.09■■■■□ 3.37
CCDC62-202ENST00000341952 THOC2Q8NI27 1593 aaKnown RBP36.04■■■■□ 3.36
CCDC62-202ENST00000341952 IFT140Q96RY7 1462 aa36.02■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms