RNA–Protein interactions for RNA: ENST00000341918.4

CXCL17-201, Transcript of C-X-C motif chemokine ligand 17, humanhuman

TSL 3

Gene CXCL17, Length 748 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL17-201ENST00000341918 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
CXCL17-201ENST00000341918 ABCC9O60706 1549 aa26.64■■□□□ 1.85
CXCL17-201ENST00000341918 CCDC180Q9P1Z9 1646 aa26.43■■□□□ 1.82
CXCL17-201ENST00000341918 DNAJC5BQ9UF47 199 aa25.34■■□□□ 1.65
CXCL17-201ENST00000341918 RB1CC1Q8TDY2 1594 aa25.27■■□□□ 1.64
CXCL17-201ENST00000341918 NACADO15069 1562 aa25.06■■□□□ 1.6
CXCL17-201ENST00000341918 PABPN1Q86U42 306 aaKnown RBP eCLIP24.71■■□□□ 1.55
CXCL17-201ENST00000341918 MYO15BQ96JP2 1530 aa24.7■■□□□ 1.54
CXCL17-201ENST00000341918 UNC13AQ9UPW8 1703 aa24.68■■□□□ 1.54
CXCL17-201ENST00000341918 BICRAQ9NZM4 1560 aa24.59■■□□□ 1.53
CXCL17-201ENST00000341918 DCAF8L2P0C7V8 631 aa24.59■■□□□ 1.53
CXCL17-201ENST00000341918 SHROOM4Q9ULL8 1493 aa24.32■■□□□ 1.48
CXCL17-201ENST00000341918 DCAF1Q9Y4B6 1507 aa24.22■■□□□ 1.47
CXCL17-201ENST00000341918 ZCCHC6Q5VYS8 1495 aaKnown RBP24.19■■□□□ 1.46
CXCL17-201ENST00000341918 CC2D2AQ9P2K1 1620 aa24.1■■□□□ 1.45
CXCL17-201ENST00000341918 CECR2Q9BXF3 1484 aa24.08■■□□□ 1.45
CXCL17-201ENST00000341918 EIF4G1Q04637 1599 aaKnown RBP23.99■■□□□ 1.43
CXCL17-201ENST00000341918 SCRIBQ14160 1630 aa23.93■■□□□ 1.42
CXCL17-201ENST00000341918 AEBP2Q6ZN18 517 aaPredicted RBP23.89■■□□□ 1.41
CXCL17-201ENST00000341918 DNAJC5Q9H3Z4 198 aa23.56■■□□□ 1.36
CXCL17-201ENST00000341918 CUX2O14529 1486 aa23.21■■□□□ 1.31
CXCL17-201ENST00000341918 NCAPD3P42695 1498 aa23.16■■□□□ 1.3
CXCL17-201ENST00000341918 ERCC6Q03468 1493 aa23.02■■□□□ 1.28
CXCL17-201ENST00000341918 ATAD2BQ9ULI0 1458 aa23■■□□□ 1.27
CXCL17-201ENST00000341918 HMGXB3Q12766 1538 aa22.95■■□□□ 1.26
CXCL17-201ENST00000341918 SMARCA2P51531 1590 aa22.92■■□□□ 1.26
CXCL17-201ENST00000341918 SMARCA4P51532 1647 aa22.87■■□□□ 1.25
CXCL17-201ENST00000341918 NESP48681 1621 aa22.8■■□□□ 1.24
CXCL17-201ENST00000341918 PEG3Q9GZU2 1588 aa22.74■■□□□ 1.23
CXCL17-201ENST00000341918 BAZ1AQ9NRL2 1556 aaPredicted RBP22.72■■□□□ 1.23
CXCL17-201ENST00000341918 BAZ1BQ9UIG0 1483 aaKnown RBP22.71■■□□□ 1.23
CXCL17-201ENST00000341918 THOC2Q8NI27 1593 aaKnown RBP22.71■■□□□ 1.23
CXCL17-201ENST00000341918 LAMC3Q9Y6N6 1575 aa22.66■■□□□ 1.22
CXCL17-201ENST00000341918 PDS5BQ9NTI5 1447 aa22.52■■□□□ 1.2
CXCL17-201ENST00000341918 MROH2BQ7Z745 1585 aa22.5■■□□□ 1.19
CXCL17-201ENST00000341918 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
CXCL17-201ENST00000341918 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.18
CXCL17-201ENST00000341918 MRC2Q9UBG0 1479 aa22.34■■□□□ 1.17
CXCL17-201ENST00000341918 WDR62O43379 1518 aa22.34■■□□□ 1.17
CXCL17-201ENST00000341918 TRIM41Q8WV44 630 aa22.21■■□□□ 1.15
CXCL17-201ENST00000341918 CHIC1Q5VXU3 224 aa22.18■■□□□ 1.14
CXCL17-201ENST00000341918 WIZO95785 1651 aa22.17■■□□□ 1.14
CXCL17-201ENST00000341918 CEP164Q9UPV0 1460 aa22.17■■□□□ 1.14
CXCL17-201ENST00000341918 FANCD2Q9BXW9 1451 aa22.11■■□□□ 1.13
CXCL17-201ENST00000341918 CFTRP13569 1480 aa22.09■■□□□ 1.13
CXCL17-201ENST00000341918 OSCARQ8IYS5 282 aa22.01■■□□□ 1.11
CXCL17-201ENST00000341918 URB2Q14146 1524 aaKnown RBP21.97■■□□□ 1.11
CXCL17-201ENST00000341918 TOP2AP11388 1531 aaKnown RBP21.93■■□□□ 1.1
CXCL17-201ENST00000341918 RSF1Q96T23 1441 aaPredicted RBP21.92■■□□□ 1.1
CXCL17-201ENST00000341918 PRDM2Q13029 1718 aa21.8■■□□□ 1.08
CXCL17-201ENST00000341918 RIMBP3CA6NJZ7 1639 aa21.78■■□□□ 1.08
CXCL17-201ENST00000341918 RIMBP3BA6NNM3 1639 aa21.78■■□□□ 1.08
CXCL17-201ENST00000341918 RIMBP3Q9UFD9 1639 aa21.78■■□□□ 1.08
CXCL17-201ENST00000341918 IFT140Q96RY7 1462 aa21.77■■□□□ 1.07
CXCL17-201ENST00000341918 ZNF608Q9ULD9 1512 aaPredicted RBP21.73■■□□□ 1.07
CXCL17-201ENST00000341918 ARHGEF11O15085 1522 aa21.7■■□□□ 1.06
CXCL17-201ENST00000341918 TOPBP1Q92547 1522 aa21.67■■□□□ 1.06
CXCL17-201ENST00000341918 CCDC88BA6NC98 1476 aa21.65■■□□□ 1.06
CXCL17-201ENST00000341918 ABCC8Q09428 1581 aa21.63■■□□□ 1.05
CXCL17-201ENST00000341918 EIF4G3O43432 1585 aaKnown RBP21.6■■□□□ 1.05
CXCL17-201ENST00000341918 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
CXCL17-201ENST00000341918 TARBP1Q13395 1621 aaKnown RBP21.52■■□□□ 1.04
CXCL17-201ENST00000341918 CHD1O14646 1710 aa21.47■■□□□ 1.03
CXCL17-201ENST00000341918 CYB5RLQ6IPT4 315 aa21.47■■□□□ 1.03
CXCL17-201ENST00000341918 AQRO60306 1485 aaKnown RBP eCLIP21.46■■□□□ 1.03
CXCL17-201ENST00000341918 ARAP1Q96P48 1450 aa21.46■■□□□ 1.03
CXCL17-201ENST00000341918 POLA1P09884 1462 aaPredicted RBP21.44■■□□□ 1.02
CXCL17-201ENST00000341918 WDR97A6NE52 1622 aa21.34■■□□□ 1.01
CXCL17-201ENST00000341918 RAD54L2Q9Y4B4 1467 aa21.31■■□□□ 1
CXCL17-201ENST00000341918 CLASP1Q7Z460 1538 aa21.3■■□□□ 1
CXCL17-201ENST00000341918 SOGA1O94964 1423 aa21.29■■□□□ 1
CXCL17-201ENST00000341918 FBLN2P98095 1184 aa21.29■■□□□ 1
CXCL17-201ENST00000341918 TRHP20396 242 aaPredicted RBP21.28■■□□□ 1
CXCL17-201ENST00000341918 TDRD9Q8NDG6 1382 aaKnown RBP21.27■■□□□ 1
CXCL17-201ENST00000341918 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
CXCL17-201ENST00000341918 MAGI1Q96QZ7 1491 aaPredicted RBP21.25■□□□□ 0.99
CXCL17-201ENST00000341918 FGD5Q6ZNL6 1462 aa21.22■□□□□ 0.99
CXCL17-201ENST00000341918 SYNJ1O43426 1573 aa21.21■□□□□ 0.99
CXCL17-201ENST00000341918 GRIN2BQ13224 1484 aa21.18■□□□□ 0.98
CXCL17-201ENST00000341918 CUX1P39880 1505 aa21.16■□□□□ 0.98
CXCL17-201ENST00000341918 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
CXCL17-201ENST00000341918 CHMP7Q8WUX9 453 aaPredicted RBP21.15■□□□□ 0.98
CXCL17-201ENST00000341918 GAPVD1Q14C86 1478 aa21.05■□□□□ 0.96
CXCL17-201ENST00000341918 PBRM1Q86U86 1689 aa21.02■□□□□ 0.96
CXCL17-201ENST00000341918 ABCA5Q8WWZ7 1642 aa21.01■□□□□ 0.95
CXCL17-201ENST00000341918 ABCA10Q8WWZ4 1543 aa21.01■□□□□ 0.95
CXCL17-201ENST00000341918 GRIN2AQ12879 1464 aa20.91■□□□□ 0.94
CXCL17-201ENST00000341918 NUP160Q12769 1436 aa20.89■□□□□ 0.94
CXCL17-201ENST00000341918 ERCC6L2Q5T890 1561 aa20.88■□□□□ 0.93
CXCL17-201ENST00000341918 ADAMTS12P58397 1594 aa20.85■□□□□ 0.93
CXCL17-201ENST00000341918 SHROOM2Q13796 1616 aa20.84■□□□□ 0.93
CXCL17-201ENST00000341918 CEP170Q5SW79 1584 aa20.84■□□□□ 0.93
CXCL17-201ENST00000341918 WRNQ14191 1432 aaPredicted RBP eCLIP20.82■□□□□ 0.92
CXCL17-201ENST00000341918 FHAD1B1AJZ9 1412 aa20.78■□□□□ 0.92
CXCL17-201ENST00000341918 TOP2BQ02880 1626 aa20.75■□□□□ 0.91
CXCL17-201ENST00000341918 BIVM-ERCC5R4GMW8 1640 aa20.75■□□□□ 0.91
CXCL17-201ENST00000341918 ERICH3Q5RHP9 1530 aa20.74■□□□□ 0.91
CXCL17-201ENST00000341918 KIF13AQ9H1H9 1805 aa20.69■□□□□ 0.9
CXCL17-201ENST00000341918 PRG4Q92954 1404 aaPredicted RBP20.64■□□□□ 0.89
CXCL17-201ENST00000341918 JPH4Q96JJ6 628 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms