RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 NISCHQ9Y2I1 1504 aa31.17■■■□□ 2.58
GTF2F2-201ENST00000340473 CCDC180Q9P1Z9 1646 aa27.37■■□□□ 1.97
GTF2F2-201ENST00000340473 ABCC9O60706 1549 aa26.22■■□□□ 1.79
GTF2F2-201ENST00000340473 ZCCHC6Q5VYS8 1495 aaKnown RBP26.11■■□□□ 1.77
GTF2F2-201ENST00000340473 DCAF8L2P0C7V8 631 aa25.82■■□□□ 1.72
GTF2F2-201ENST00000340473 DCAF1Q9Y4B6 1507 aa25.77■■□□□ 1.72
GTF2F2-201ENST00000340473 MYO15BQ96JP2 1530 aa25.61■■□□□ 1.69
GTF2F2-201ENST00000340473 NACADO15069 1562 aa25.57■■□□□ 1.68
GTF2F2-201ENST00000340473 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
GTF2F2-201ENST00000340473 SHROOM4Q9ULL8 1493 aa25.13■■□□□ 1.61
GTF2F2-201ENST00000340473 SCRIBQ14160 1630 aa25.11■■□□□ 1.61
GTF2F2-201ENST00000340473 UNC13AQ9UPW8 1703 aa24.94■■□□□ 1.58
GTF2F2-201ENST00000340473 BICRAQ9NZM4 1560 aa24.71■■□□□ 1.55
GTF2F2-201ENST00000340473 PABPN1Q86U42 306 aaKnown RBP eCLIP24.63■■□□□ 1.53
GTF2F2-201ENST00000340473 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
GTF2F2-201ENST00000340473 BAZ1AQ9NRL2 1556 aaPredicted RBP24.09■■□□□ 1.45
GTF2F2-201ENST00000340473 MROH2BQ7Z745 1585 aa24.07■■□□□ 1.44
GTF2F2-201ENST00000340473 SMARCA4P51532 1647 aa24.05■■□□□ 1.44
GTF2F2-201ENST00000340473 RSF1Q96T23 1441 aaPredicted RBP24.02■■□□□ 1.44
GTF2F2-201ENST00000340473 EIF4G1Q04637 1599 aaKnown RBP23.98■■□□□ 1.43
GTF2F2-201ENST00000340473 SUPT5HO00267 1087 aaKnown RBP23.96■■□□□ 1.43
GTF2F2-201ENST00000340473 WIZO95785 1651 aa23.85■■□□□ 1.41
GTF2F2-201ENST00000340473 PEG3Q9GZU2 1588 aa23.77■■□□□ 1.4
GTF2F2-201ENST00000340473 ATAD2BQ9ULI0 1458 aa23.75■■□□□ 1.39
GTF2F2-201ENST00000340473 CC2D2AQ9P2K1 1620 aa23.73■■□□□ 1.39
GTF2F2-201ENST00000340473 SMARCA2P51531 1590 aa23.71■■□□□ 1.39
GTF2F2-201ENST00000340473 NCAPD3P42695 1498 aa23.6■■□□□ 1.37
GTF2F2-201ENST00000340473 TOP2AP11388 1531 aaKnown RBP23.6■■□□□ 1.37
GTF2F2-201ENST00000340473 BAZ1BQ9UIG0 1483 aaKnown RBP23.58■■□□□ 1.37
GTF2F2-201ENST00000340473 HMGXB3Q12766 1538 aa23.55■■□□□ 1.36
GTF2F2-201ENST00000340473 DNAJC5BQ9UF47 199 aa23.49■■□□□ 1.35
GTF2F2-201ENST00000340473 CCDC88BA6NC98 1476 aa23.34■■□□□ 1.33
GTF2F2-201ENST00000340473 CFTRP13569 1480 aa22.97■■□□□ 1.27
GTF2F2-201ENST00000340473 CADPSQ9ULU8 1353 aa22.97■■□□□ 1.27
GTF2F2-201ENST00000340473 NESP48681 1621 aa22.91■■□□□ 1.26
GTF2F2-201ENST00000340473 LAMC3Q9Y6N6 1575 aa22.86■■□□□ 1.25
GTF2F2-201ENST00000340473 PRDM2Q13029 1718 aa22.84■■□□□ 1.25
GTF2F2-201ENST00000340473 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
GTF2F2-201ENST00000340473 ABCC8Q09428 1581 aa22.73■■□□□ 1.23
GTF2F2-201ENST00000340473 FANCD2Q9BXW9 1451 aa22.72■■□□□ 1.23
GTF2F2-201ENST00000340473 PDS5BQ9NTI5 1447 aa22.68■■□□□ 1.22
GTF2F2-201ENST00000340473 KIF21AQ7Z4S6 1674 aa22.63■■□□□ 1.21
GTF2F2-201ENST00000340473 WRNQ14191 1432 aaPredicted RBP eCLIP22.62■■□□□ 1.21
GTF2F2-201ENST00000340473 CEP164Q9UPV0 1460 aa22.61■■□□□ 1.21
GTF2F2-201ENST00000340473 TRIM41Q8WV44 630 aa22.56■■□□□ 1.2
GTF2F2-201ENST00000340473 SYNJ1O43426 1573 aa22.56■■□□□ 1.2
GTF2F2-201ENST00000340473 CUX1P39880 1505 aa22.53■■□□□ 1.2
GTF2F2-201ENST00000340473 ERCC6Q03468 1493 aa22.51■■□□□ 1.19
GTF2F2-201ENST00000340473 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
GTF2F2-201ENST00000340473 BIVM-ERCC5R4GMW8 1640 aa22.48■■□□□ 1.19
GTF2F2-201ENST00000340473 URB2Q14146 1524 aaKnown RBP22.47■■□□□ 1.19
GTF2F2-201ENST00000340473 DNMBPQ6XZF7 1577 aa22.45■■□□□ 1.18
GTF2F2-201ENST00000340473 TOPBP1Q92547 1522 aa22.44■■□□□ 1.18
GTF2F2-201ENST00000340473 MRC2Q9UBG0 1479 aa22.43■■□□□ 1.18
GTF2F2-201ENST00000340473 THOC2Q8NI27 1593 aaKnown RBP22.37■■□□□ 1.17
GTF2F2-201ENST00000340473 WDR62O43379 1518 aa22.34■■□□□ 1.17
GTF2F2-201ENST00000340473 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
GTF2F2-201ENST00000340473 POLA1P09884 1462 aaPredicted RBP22.3■■□□□ 1.16
GTF2F2-201ENST00000340473 RAD54L2Q9Y4B4 1467 aa22.22■■□□□ 1.15
GTF2F2-201ENST00000340473 SOGA1O94964 1423 aa22.22■■□□□ 1.15
GTF2F2-201ENST00000340473 CUX2O14529 1486 aa22.18■■□□□ 1.14
GTF2F2-201ENST00000340473 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
GTF2F2-201ENST00000340473 ABCA10Q8WWZ4 1543 aa22.14■■□□□ 1.13
GTF2F2-201ENST00000340473 FAM9AQ8IZU1 332 aaPredicted RBP22.14■■□□□ 1.13
GTF2F2-201ENST00000340473 TARBP1Q13395 1621 aaKnown RBP22.13■■□□□ 1.13
GTF2F2-201ENST00000340473 WDR97A6NE52 1622 aa22.12■■□□□ 1.13
GTF2F2-201ENST00000340473 IFT140Q96RY7 1462 aa22.09■■□□□ 1.13
GTF2F2-201ENST00000340473 EEA1Q15075 1411 aa22.07■■□□□ 1.12
GTF2F2-201ENST00000340473 KIF27Q86VH2 1401 aa22.07■■□□□ 1.12
GTF2F2-201ENST00000340473 TDRD9Q8NDG6 1382 aaKnown RBP22.03■■□□□ 1.12
GTF2F2-201ENST00000340473 ZNF608Q9ULD9 1512 aaPredicted RBP22■■□□□ 1.11
GTF2F2-201ENST00000340473 ABCA5Q8WWZ7 1642 aa22■■□□□ 1.11
GTF2F2-201ENST00000340473 CSRNP3Q8WYN3 585 aa21.98■■□□□ 1.11
GTF2F2-201ENST00000340473 AQRO60306 1485 aaKnown RBP eCLIP21.96■■□□□ 1.11
GTF2F2-201ENST00000340473 GAPVD1Q14C86 1478 aa21.95■■□□□ 1.1
GTF2F2-201ENST00000340473 IGF1RP08069 1367 aa21.93■■□□□ 1.1
GTF2F2-201ENST00000340473 EIF4G3O43432 1585 aaKnown RBP21.92■■□□□ 1.1
GTF2F2-201ENST00000340473 PBRM1Q86U86 1689 aa21.87■■□□□ 1.09
GTF2F2-201ENST00000340473 ERICH3Q5RHP9 1530 aa21.87■■□□□ 1.09
GTF2F2-201ENST00000340473 LOC105371045A0A1W2PR82 267 aa21.86■■□□□ 1.09
GTF2F2-201ENST00000340473 GRIN2BQ13224 1484 aa21.84■■□□□ 1.09
GTF2F2-201ENST00000340473 EHMT2Q96KQ7 1210 aa21.84■■□□□ 1.09
GTF2F2-201ENST00000340473 PRXQ9BXM0 1461 aa21.84■■□□□ 1.09
GTF2F2-201ENST00000340473 KIF21BO75037 1637 aa21.83■■□□□ 1.08
GTF2F2-201ENST00000340473 CARMIL1Q5VZK9 1371 aa21.8■■□□□ 1.08
GTF2F2-201ENST00000340473 CUL7Q14999 1698 aa21.8■■□□□ 1.08
GTF2F2-201ENST00000340473 RAPGEF2Q9Y4G8 1499 aa21.78■■□□□ 1.08
GTF2F2-201ENST00000340473 GOLGA3Q08378 1498 aa21.76■■□□□ 1.07
GTF2F2-201ENST00000340473 SNAPC4Q5SXM2 1469 aa21.76■■□□□ 1.07
GTF2F2-201ENST00000340473 ADAMTS12P58397 1594 aa21.74■■□□□ 1.07
GTF2F2-201ENST00000340473 FHAD1B1AJZ9 1412 aa21.71■■□□□ 1.07
GTF2F2-201ENST00000340473 MAGI1Q96QZ7 1491 aaPredicted RBP21.71■■□□□ 1.07
GTF2F2-201ENST00000340473 UBTFP17480 764 aaKnown RBP21.65■■□□□ 1.06
GTF2F2-201ENST00000340473 SYNJ2O15056 1496 aa21.63■■□□□ 1.05
GTF2F2-201ENST00000340473 TNIKQ9UKE5 1360 aa21.61■■□□□ 1.05
GTF2F2-201ENST00000340473 GRIN2AQ12879 1464 aa21.58■■□□□ 1.05
GTF2F2-201ENST00000340473 CHMP7Q8WUX9 453 aaPredicted RBP21.57■■□□□ 1.04
GTF2F2-201ENST00000340473 FBLN2P98095 1184 aa21.56■■□□□ 1.04
GTF2F2-201ENST00000340473 CHD1O14646 1710 aa21.52■■□□□ 1.04
GTF2F2-201ENST00000340473 CTTNBP2Q8WZ74 1663 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms