RNA–Protein interactions for RNA: ENST00000340434.4

PTAR1-201, Transcript of protein prenyltransferase alpha subunit repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTAR1, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTAR1-201ENST00000340434 NISCHQ9Y2I1 1504 aa27.45■■□□□ 1.99
PTAR1-201ENST00000340434 ABCC9O60706 1549 aa25.22■■□□□ 1.63
PTAR1-201ENST00000340434 CCDC180Q9P1Z9 1646 aa24.63■■□□□ 1.53
PTAR1-201ENST00000340434 DNAJC5BQ9UF47 199 aa24.07■■□□□ 1.44
PTAR1-201ENST00000340434 RB1CC1Q8TDY2 1594 aa23.71■■□□□ 1.39
PTAR1-201ENST00000340434 DCAF8L2P0C7V8 631 aa23.57■■□□□ 1.36
PTAR1-201ENST00000340434 PABPN1Q86U42 306 aaKnown RBP eCLIP23.52■■□□□ 1.36
PTAR1-201ENST00000340434 NACADO15069 1562 aa23.46■■□□□ 1.35
PTAR1-201ENST00000340434 UNC13AQ9UPW8 1703 aa23.08■■□□□ 1.29
PTAR1-201ENST00000340434 BICRAQ9NZM4 1560 aa23.06■■□□□ 1.28
PTAR1-201ENST00000340434 MYO15BQ96JP2 1530 aa22.99■■□□□ 1.27
PTAR1-201ENST00000340434 CECR2Q9BXF3 1484 aa22.72■■□□□ 1.23
PTAR1-201ENST00000340434 CC2D2AQ9P2K1 1620 aa22.66■■□□□ 1.22
PTAR1-201ENST00000340434 ZCCHC6Q5VYS8 1495 aaKnown RBP22.65■■□□□ 1.22
PTAR1-201ENST00000340434 DNAJC5Q9H3Z4 198 aa22.64■■□□□ 1.21
PTAR1-201ENST00000340434 SHROOM4Q9ULL8 1493 aa22.62■■□□□ 1.21
PTAR1-201ENST00000340434 DCAF1Q9Y4B6 1507 aa22.57■■□□□ 1.2
PTAR1-201ENST00000340434 SCRIBQ14160 1630 aa22.56■■□□□ 1.2
PTAR1-201ENST00000340434 EIF4G1Q04637 1599 aaKnown RBP22.53■■□□□ 1.2
PTAR1-201ENST00000340434 AEBP2Q6ZN18 517 aaPredicted RBP21.92■■□□□ 1.1
PTAR1-201ENST00000340434 CUX2O14529 1486 aa21.77■■□□□ 1.08
PTAR1-201ENST00000340434 ERCC6Q03468 1493 aa21.76■■□□□ 1.07
PTAR1-201ENST00000340434 NCAPD3P42695 1498 aa21.73■■□□□ 1.07
PTAR1-201ENST00000340434 ATAD2BQ9ULI0 1458 aa21.63■■□□□ 1.05
PTAR1-201ENST00000340434 NESP48681 1621 aa21.56■■□□□ 1.04
PTAR1-201ENST00000340434 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
PTAR1-201ENST00000340434 HMGXB3Q12766 1538 aa21.45■■□□□ 1.03
PTAR1-201ENST00000340434 SMARCA4P51532 1647 aa21.44■■□□□ 1.02
PTAR1-201ENST00000340434 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.01
PTAR1-201ENST00000340434 TRIM41Q8WV44 630 aa21.32■■□□□ 1
PTAR1-201ENST00000340434 BAZ1AQ9NRL2 1556 aaPredicted RBP21.29■■□□□ 1
PTAR1-201ENST00000340434 THOC2Q8NI27 1593 aaKnown RBP21.27■■□□□ 1
PTAR1-201ENST00000340434 LAMC3Q9Y6N6 1575 aa21.22■□□□□ 0.99
PTAR1-201ENST00000340434 PEG3Q9GZU2 1588 aa21.2■□□□□ 0.98
PTAR1-201ENST00000340434 PDS5BQ9NTI5 1447 aa21.2■□□□□ 0.98
PTAR1-201ENST00000340434 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
PTAR1-201ENST00000340434 CHIC1Q5VXU3 224 aa21.15■□□□□ 0.98
PTAR1-201ENST00000340434 KIF21AQ7Z4S6 1674 aa21.12■□□□□ 0.97
PTAR1-201ENST00000340434 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
PTAR1-201ENST00000340434 MRC2Q9UBG0 1479 aa21.01■□□□□ 0.95
PTAR1-201ENST00000340434 WDR62O43379 1518 aa20.92■□□□□ 0.94
PTAR1-201ENST00000340434 WIZO95785 1651 aa20.87■□□□□ 0.93
PTAR1-201ENST00000340434 OSCARQ8IYS5 282 aa20.87■□□□□ 0.93
PTAR1-201ENST00000340434 CEP164Q9UPV0 1460 aa20.86■□□□□ 0.93
PTAR1-201ENST00000340434 FANCD2Q9BXW9 1451 aa20.84■□□□□ 0.93
PTAR1-201ENST00000340434 CFTRP13569 1480 aa20.74■□□□□ 0.91
PTAR1-201ENST00000340434 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
PTAR1-201ENST00000340434 RSF1Q96T23 1441 aaPredicted RBP20.65■□□□□ 0.9
PTAR1-201ENST00000340434 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
PTAR1-201ENST00000340434 ZNF608Q9ULD9 1512 aaPredicted RBP20.52■□□□□ 0.88
PTAR1-201ENST00000340434 RIMBP3CA6NJZ7 1639 aa20.49■□□□□ 0.87
PTAR1-201ENST00000340434 RIMBP3BA6NNM3 1639 aa20.49■□□□□ 0.87
PTAR1-201ENST00000340434 RIMBP3Q9UFD9 1639 aa20.49■□□□□ 0.87
PTAR1-201ENST00000340434 IFT140Q96RY7 1462 aa20.46■□□□□ 0.87
PTAR1-201ENST00000340434 CYB5RLQ6IPT4 315 aa20.44■□□□□ 0.86
PTAR1-201ENST00000340434 ARHGEF11O15085 1522 aa20.43■□□□□ 0.86
PTAR1-201ENST00000340434 CCDC88BA6NC98 1476 aa20.42■□□□□ 0.86
PTAR1-201ENST00000340434 TOPBP1Q92547 1522 aa20.38■□□□□ 0.85
PTAR1-201ENST00000340434 TRHP20396 242 aaPredicted RBP20.34■□□□□ 0.85
PTAR1-201ENST00000340434 FBLN2P98095 1184 aa20.34■□□□□ 0.85
PTAR1-201ENST00000340434 AQRO60306 1485 aaKnown RBP eCLIP20.33■□□□□ 0.847e-7■■■■□ 23.2
PTAR1-201ENST00000340434 PRDM2Q13029 1718 aa20.28■□□□□ 0.84
PTAR1-201ENST00000340434 EIF4G3O43432 1585 aaKnown RBP20.27■□□□□ 0.84
PTAR1-201ENST00000340434 ABCC8Q09428 1581 aa20.27■□□□□ 0.83
PTAR1-201ENST00000340434 ARAP1Q96P48 1450 aa20.22■□□□□ 0.83
PTAR1-201ENST00000340434 DNMBPQ6XZF7 1577 aa20.22■□□□□ 0.83
PTAR1-201ENST00000340434 TARBP1Q13395 1621 aaKnown RBP20.18■□□□□ 0.82
PTAR1-201ENST00000340434 TDRD9Q8NDG6 1382 aaKnown RBP20.17■□□□□ 0.82
PTAR1-201ENST00000340434 POLA1P09884 1462 aaPredicted RBP20.16■□□□□ 0.82
PTAR1-201ENST00000340434 RAD54L2Q9Y4B4 1467 aa20.16■□□□□ 0.82
PTAR1-201ENST00000340434 CHD1O14646 1710 aa20.15■□□□□ 0.82
PTAR1-201ENST00000340434 SOGA1O94964 1423 aa20.11■□□□□ 0.81
PTAR1-201ENST00000340434 CHMP7Q8WUX9 453 aaPredicted RBP20.09■□□□□ 0.81
PTAR1-201ENST00000340434 SNAPC4Q5SXM2 1469 aa20.04■□□□□ 0.8
PTAR1-201ENST00000340434 FGD5Q6ZNL6 1462 aa19.99■□□□□ 0.79
PTAR1-201ENST00000340434 CLASP1Q7Z460 1538 aa19.97■□□□□ 0.79
PTAR1-201ENST00000340434 GRIN2BQ13224 1484 aa19.92■□□□□ 0.78
PTAR1-201ENST00000340434 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
PTAR1-201ENST00000340434 SYNJ1O43426 1573 aa19.91■□□□□ 0.78
PTAR1-201ENST00000340434 CUX1P39880 1505 aa19.91■□□□□ 0.78
PTAR1-201ENST00000340434 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
PTAR1-201ENST00000340434 GAPVD1Q14C86 1478 aa19.85■□□□□ 0.77
PTAR1-201ENST00000340434 WDR97A6NE52 1622 aa19.85■□□□□ 0.77
PTAR1-201ENST00000340434 ABCA10Q8WWZ4 1543 aa19.71■□□□□ 0.75
PTAR1-201ENST00000340434 ERCC6L2Q5T890 1561 aa19.7■□□□□ 0.74
PTAR1-201ENST00000340434 PBRM1Q86U86 1689 aa19.69■□□□□ 0.74
PTAR1-201ENST00000340434 GRIN2AQ12879 1464 aa19.66■□□□□ 0.74
PTAR1-201ENST00000340434 ABCA5Q8WWZ7 1642 aa19.66■□□□□ 0.74
PTAR1-201ENST00000340434 SUPT5HO00267 1087 aaKnown RBP19.62■□□□□ 0.73
PTAR1-201ENST00000340434 NUP160Q12769 1436 aa19.61■□□□□ 0.73
PTAR1-201ENST00000340434 WRNQ14191 1432 aaPredicted RBP eCLIP19.61■□□□□ 0.73
PTAR1-201ENST00000340434 CEP170Q5SW79 1584 aa19.6■□□□□ 0.73
PTAR1-201ENST00000340434 ILDR1Q86SU0 546 aaPredicted RBP19.57■□□□□ 0.72
PTAR1-201ENST00000340434 FHAD1B1AJZ9 1412 aa19.55■□□□□ 0.72
PTAR1-201ENST00000340434 ADAMTS12P58397 1594 aa19.54■□□□□ 0.72
PTAR1-201ENST00000340434 JPH4Q96JJ6 628 aa19.51■□□□□ 0.71
PTAR1-201ENST00000340434 PRG4Q92954 1404 aaPredicted RBP19.51■□□□□ 0.71
PTAR1-201ENST00000340434 FAM69CQ0P6D2 419 aa19.48■□□□□ 0.71
PTAR1-201ENST00000340434 SHROOM2Q13796 1616 aa19.47■□□□□ 0.71
PTAR1-201ENST00000340434 NPM1P06748 294 aaKnown RBP eCLIP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms