RNA–Protein interactions for RNA: ENST00000339360.9

RAP1GDS1-202, Transcript of Rap1 GTPase-GDP dissociation stimulator 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAP1GDS1, Length 2,092 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1GDS1-202ENST00000339360 NISCHQ9Y2I1 1504 aa14.27□□□□□ -0.13
RAP1GDS1-202ENST00000339360 CCDC180Q9P1Z9 1646 aa12.81□□□□□ -0.36
RAP1GDS1-202ENST00000339360 ABCC9O60706 1549 aa12.4□□□□□ -0.43
RAP1GDS1-202ENST00000339360 RB1CC1Q8TDY2 1594 aa12.01□□□□□ -0.49
RAP1GDS1-202ENST00000339360 NACADO15069 1562 aa11.97□□□□□ -0.49
RAP1GDS1-202ENST00000339360 ZCCHC6Q5VYS8 1495 aaKnown RBP11.92□□□□□ -0.5
RAP1GDS1-202ENST00000339360 DCAF8L2P0C7V8 631 aa11.91□□□□□ -0.5
RAP1GDS1-202ENST00000339360 MYO15BQ96JP2 1530 aa11.86□□□□□ -0.51
RAP1GDS1-202ENST00000339360 DCAF1Q9Y4B6 1507 aa11.82□□□□□ -0.52
RAP1GDS1-202ENST00000339360 UNC13AQ9UPW8 1703 aa11.76□□□□□ -0.53
RAP1GDS1-202ENST00000339360 SCRIBQ14160 1630 aa11.66□□□□□ -0.54
RAP1GDS1-202ENST00000339360 AEBP2Q6ZN18 517 aaPredicted RBP11.56□□□□□ -0.56
RAP1GDS1-202ENST00000339360 BICRAQ9NZM4 1560 aa11.54□□□□□ -0.56
RAP1GDS1-202ENST00000339360 SHROOM4Q9ULL8 1493 aa11.52□□□□□ -0.57
RAP1GDS1-202ENST00000339360 PABPN1Q86U42 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
RAP1GDS1-202ENST00000339360 EIF4G1Q04637 1599 aaKnown RBP11.3□□□□□ -0.6
RAP1GDS1-202ENST00000339360 CC2D2AQ9P2K1 1620 aa11.25□□□□□ -0.61
RAP1GDS1-202ENST00000339360 DNAJC5BQ9UF47 199 aa11.15□□□□□ -0.63
RAP1GDS1-202ENST00000339360 CECR2Q9BXF3 1484 aa11.14□□□□□ -0.63
RAP1GDS1-202ENST00000339360 BAZ1AQ9NRL2 1556 aaPredicted RBP11.13□□□□□ -0.63
RAP1GDS1-202ENST00000339360 SMARCA4P51532 1647 aa11.13□□□□□ -0.63
RAP1GDS1-202ENST00000339360 SMARCA2P51531 1590 aa11.06□□□□□ -0.64
RAP1GDS1-202ENST00000339360 HMGXB3Q12766 1538 aa11□□□□□ -0.65
RAP1GDS1-202ENST00000339360 ATAD2BQ9ULI0 1458 aa10.98□□□□□ -0.65
RAP1GDS1-202ENST00000339360 PEG3Q9GZU2 1588 aa10.98□□□□□ -0.65
RAP1GDS1-202ENST00000339360 CHIC1Q5VXU3 224 aa10.97□□□□□ -0.65
RAP1GDS1-202ENST00000339360 BAZ1BQ9UIG0 1483 aaKnown RBP10.97□□□□□ -0.65
RAP1GDS1-202ENST00000339360 MROH2BQ7Z745 1585 aa10.97□□□□□ -0.65
RAP1GDS1-202ENST00000339360 NCAPD3P42695 1498 aa10.95□□□□□ -0.66
RAP1GDS1-202ENST00000339360 WIZO95785 1651 aa10.92□□□□□ -0.66
RAP1GDS1-202ENST00000339360 RSF1Q96T23 1441 aaPredicted RBP10.83□□□□□ -0.68
RAP1GDS1-202ENST00000339360 TOP2AP11388 1531 aaKnown RBP10.82□□□□□ -0.68
RAP1GDS1-202ENST00000339360 LAMC3Q9Y6N6 1575 aa10.77□□□□□ -0.68
RAP1GDS1-202ENST00000339360 ERCC6Q03468 1493 aa10.76□□□□□ -0.69
RAP1GDS1-202ENST00000339360 POTEDQ86YR6 584 aa10.76□□□□□ -0.69
RAP1GDS1-202ENST00000339360 PRDM2Q13029 1718 aa10.73□□□□□ -0.69
RAP1GDS1-202ENST00000339360 NESP48681 1621 aa10.7□□□□□ -0.7
RAP1GDS1-202ENST00000339360 KIF21AQ7Z4S6 1674 aa10.7□□□□□ -0.7
RAP1GDS1-202ENST00000339360 PDS5BQ9NTI5 1447 aa10.65□□□□□ -0.7
RAP1GDS1-202ENST00000339360 CADPSQ9ULU8 1353 aa10.64□□□□□ -0.71
RAP1GDS1-202ENST00000339360 THOC2Q8NI27 1593 aaKnown RBP10.62□□□□□ -0.71
RAP1GDS1-202ENST00000339360 CCDC88BA6NC98 1476 aa10.61□□□□□ -0.71
RAP1GDS1-202ENST00000339360 CEP164Q9UPV0 1460 aa10.61□□□□□ -0.71
RAP1GDS1-202ENST00000339360 SUPT5HO00267 1087 aaKnown RBP10.61□□□□□ -0.71
RAP1GDS1-202ENST00000339360 CUX2O14529 1486 aa10.6□□□□□ -0.71
RAP1GDS1-202ENST00000339360 CFTRP13569 1480 aa10.6□□□□□ -0.71
RAP1GDS1-202ENST00000339360 FANCD2Q9BXW9 1451 aa10.58□□□□□ -0.72
RAP1GDS1-202ENST00000339360 MRC2Q9UBG0 1479 aa10.56□□□□□ -0.72
RAP1GDS1-202ENST00000339360 WDR62O43379 1518 aa10.53□□□□□ -0.72
RAP1GDS1-202ENST00000339360 DNMBPQ6XZF7 1577 aa10.45□□□□□ -0.74
RAP1GDS1-202ENST00000339360 ABCC8Q09428 1581 aa10.44□□□□□ -0.74
RAP1GDS1-202ENST00000339360 URB2Q14146 1524 aaKnown RBP10.43□□□□□ -0.74
RAP1GDS1-202ENST00000339360 TOPBP1Q92547 1522 aa10.4□□□□□ -0.74
RAP1GDS1-202ENST00000339360 IFT140Q96RY7 1462 aa10.35□□□□□ -0.75
RAP1GDS1-202ENST00000339360 EIF4G3O43432 1585 aaKnown RBP10.32□□□□□ -0.76
RAP1GDS1-202ENST00000339360 BIVM-ERCC5R4GMW8 1640 aa10.32□□□□□ -0.76
RAP1GDS1-202ENST00000339360 CUX1P39880 1505 aa10.32□□□□□ -0.76
RAP1GDS1-202ENST00000339360 POLA1P09884 1462 aaPredicted RBP10.31□□□□□ -0.76
RAP1GDS1-202ENST00000339360 FGD5Q6ZNL6 1462 aa10.31□□□□□ -0.76
RAP1GDS1-202ENST00000339360 WDR97A6NE52 1622 aa10.3□□□□□ -0.76
RAP1GDS1-202ENST00000339360 TARBP1Q13395 1621 aaKnown RBP10.29□□□□□ -0.76
RAP1GDS1-202ENST00000339360 TOP2BQ02880 1626 aa10.29□□□□□ -0.76
RAP1GDS1-202ENST00000339360 WRNQ14191 1432 aaPredicted RBP eCLIP10.29□□□□□ -0.76
RAP1GDS1-202ENST00000339360 SYNJ1O43426 1573 aa10.27□□□□□ -0.77
RAP1GDS1-202ENST00000339360 PBRM1Q86U86 1689 aa10.26□□□□□ -0.77
RAP1GDS1-202ENST00000339360 SOGA1O94964 1423 aa10.24□□□□□ -0.77
RAP1GDS1-202ENST00000339360 ZNF608Q9ULD9 1512 aaPredicted RBP10.24□□□□□ -0.77
RAP1GDS1-202ENST00000339360 RAD54L2Q9Y4B4 1467 aa10.23□□□□□ -0.77
RAP1GDS1-202ENST00000339360 CHD1O14646 1710 aa10.21□□□□□ -0.77
RAP1GDS1-202ENST00000339360 ABCA5Q8WWZ7 1642 aa10.2□□□□□ -0.78
RAP1GDS1-202ENST00000339360 ABCA10Q8WWZ4 1543 aa10.19□□□□□ -0.78
RAP1GDS1-202ENST00000339360 SENP3Q9H4L4 574 aaPredicted RBP10.19□□□□□ -0.78
RAP1GDS1-202ENST00000339360 AQRO60306 1485 aaKnown RBP eCLIP10.18□□□□□ -0.78
RAP1GDS1-202ENST00000339360 GRIN2BQ13224 1484 aa10.16□□□□□ -0.78
RAP1GDS1-202ENST00000339360 GAPVD1Q14C86 1478 aa10.16□□□□□ -0.78
RAP1GDS1-202ENST00000339360 SNAPC4Q5SXM2 1469 aa10.16□□□□□ -0.78
RAP1GDS1-202ENST00000339360 MAGI1Q96QZ7 1491 aaPredicted RBP10.16□□□□□ -0.78
RAP1GDS1-202ENST00000339360 TDRD9Q8NDG6 1382 aaKnown RBP10.15□□□□□ -0.78
RAP1GDS1-202ENST00000339360 ADAMTS12P58397 1594 aa10.12□□□□□ -0.79
RAP1GDS1-202ENST00000339360 ERICH3Q5RHP9 1530 aa10.11□□□□□ -0.79
RAP1GDS1-202ENST00000339360 FBLN2P98095 1184 aa10.1□□□□□ -0.79
RAP1GDS1-202ENST00000339360 CUL7Q14999 1698 aa10.1□□□□□ -0.79
RAP1GDS1-202ENST00000339360 SYNJ2O15056 1496 aa10.1□□□□□ -0.79
RAP1GDS1-202ENST00000339360 DNAJC5Q9H3Z4 198 aa10.09□□□□□ -0.79
RAP1GDS1-202ENST00000339360 KIF27Q86VH2 1401 aa10.08□□□□□ -0.8
RAP1GDS1-202ENST00000339360 OSCARQ8IYS5 282 aa10.08□□□□□ -0.8
RAP1GDS1-202ENST00000339360 CHMP7Q8WUX9 453 aaPredicted RBP10.06□□□□□ -0.8
RAP1GDS1-202ENST00000339360 FHAD1B1AJZ9 1412 aa10.04□□□□□ -0.8
RAP1GDS1-202ENST00000339360 GRIN2AQ12879 1464 aa10.04□□□□□ -0.8
RAP1GDS1-202ENST00000339360 TRIM41Q8WV44 630 aa10.03□□□□□ -0.8
RAP1GDS1-202ENST00000339360 CLASP1Q7Z460 1538 aa10.01□□□□□ -0.81
RAP1GDS1-202ENST00000339360 RIMBP3CA6NJZ7 1639 aa10.01□□□□□ -0.81
RAP1GDS1-202ENST00000339360 RIMBP3BA6NNM3 1639 aa10.01□□□□□ -0.81
RAP1GDS1-202ENST00000339360 RIMBP3Q9UFD9 1639 aa10.01□□□□□ -0.81
RAP1GDS1-202ENST00000339360 CEP170Q5SW79 1584 aa9.99□□□□□ -0.81
RAP1GDS1-202ENST00000339360 ARHGEF11O15085 1522 aa9.99□□□□□ -0.81
RAP1GDS1-202ENST00000339360 RUSC2Q8N2Y8 1516 aa9.98□□□□□ -0.81
RAP1GDS1-202ENST00000339360 CTTNBP2Q8WZ74 1663 aa9.96□□□□□ -0.82
RAP1GDS1-202ENST00000339360 NUP160Q12769 1436 aa9.95□□□□□ -0.82
RAP1GDS1-202ENST00000339360 SHROOM2Q13796 1616 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms