RNA–Protein interactions for RNA: ENST00000333674.5

PMS2P6-201, Transcript of PMS1 homolog 2, mismatch repair system component pseudogene 6, humanhuman

BASIC

Gene PMS2P6, Length 710 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P6-201ENST00000333674 NISCHQ9Y2I1 1504 aa23.77■■□□□ 1.4
PMS2P6-201ENST00000333674 CCDC180Q9P1Z9 1646 aa21.15■□□□□ 0.98
PMS2P6-201ENST00000333674 ABCC9O60706 1549 aa20.94■□□□□ 0.94
PMS2P6-201ENST00000333674 DCAF8L2P0C7V8 631 aa20.1■□□□□ 0.81
PMS2P6-201ENST00000333674 RB1CC1Q8TDY2 1594 aa20.05■□□□□ 0.8
PMS2P6-201ENST00000333674 NACADO15069 1562 aa20■□□□□ 0.79
PMS2P6-201ENST00000333674 AEBP2Q6ZN18 517 aaPredicted RBP19.8■□□□□ 0.76
PMS2P6-201ENST00000333674 MYO15BQ96JP2 1530 aa19.8■□□□□ 0.76
PMS2P6-201ENST00000333674 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
PMS2P6-201ENST00000333674 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
PMS2P6-201ENST00000333674 DCAF1Q9Y4B6 1507 aa19.64■□□□□ 0.73
PMS2P6-201ENST00000333674 PABPN1Q86U42 306 aaKnown RBP eCLIP19.6■□□□□ 0.73
PMS2P6-201ENST00000333674 UNC13AQ9UPW8 1703 aa19.51■□□□□ 0.71
PMS2P6-201ENST00000333674 DNAJC5BQ9UF47 199 aa19.4■□□□□ 0.7
PMS2P6-201ENST00000333674 BICRAQ9NZM4 1560 aa19.4■□□□□ 0.7
PMS2P6-201ENST00000333674 SCRIBQ14160 1630 aa19.3■□□□□ 0.68
PMS2P6-201ENST00000333674 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
PMS2P6-201ENST00000333674 EIF4G1Q04637 1599 aaKnown RBP18.93■□□□□ 0.62
PMS2P6-201ENST00000333674 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
PMS2P6-201ENST00000333674 CECR2Q9BXF3 1484 aa18.84■□□□□ 0.61
PMS2P6-201ENST00000333674 NCAPD3P42695 1498 aa18.46■□□□□ 0.55
PMS2P6-201ENST00000333674 SMARCA4P51532 1647 aa18.45■□□□□ 0.54
PMS2P6-201ENST00000333674 BAZ1AQ9NRL2 1556 aaPredicted RBP18.44■□□□□ 0.54
PMS2P6-201ENST00000333674 ATAD2BQ9ULI0 1458 aa18.44■□□□□ 0.54
PMS2P6-201ENST00000333674 SMARCA2P51531 1590 aa18.4■□□□□ 0.54
PMS2P6-201ENST00000333674 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
PMS2P6-201ENST00000333674 MROH2BQ7Z745 1585 aa18.3■□□□□ 0.52
PMS2P6-201ENST00000333674 BAZ1BQ9UIG0 1483 aaKnown RBP18.28■□□□□ 0.52
PMS2P6-201ENST00000333674 PEG3Q9GZU2 1588 aa18.27■□□□□ 0.52
PMS2P6-201ENST00000333674 ERCC6Q03468 1493 aa18.09■□□□□ 0.49
PMS2P6-201ENST00000333674 WIZO95785 1651 aa18.09■□□□□ 0.49
PMS2P6-201ENST00000333674 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
PMS2P6-201ENST00000333674 NESP48681 1621 aa18.04■□□□□ 0.48
PMS2P6-201ENST00000333674 LAMC3Q9Y6N6 1575 aa17.98■□□□□ 0.47
PMS2P6-201ENST00000333674 CADPSQ9ULU8 1353 aa17.94■□□□□ 0.46
PMS2P6-201ENST00000333674 PDS5BQ9NTI5 1447 aa17.93■□□□□ 0.46
PMS2P6-201ENST00000333674 CUX2O14529 1486 aa17.93■□□□□ 0.46
PMS2P6-201ENST00000333674 TOP2AP11388 1531 aaKnown RBP17.88■□□□□ 0.45
PMS2P6-201ENST00000333674 KIF21AQ7Z4S6 1674 aa17.78■□□□□ 0.44
PMS2P6-201ENST00000333674 CFTRP13569 1480 aa17.76■□□□□ 0.43
PMS2P6-201ENST00000333674 THOC2Q8NI27 1593 aaKnown RBP17.75■□□□□ 0.43
PMS2P6-201ENST00000333674 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
PMS2P6-201ENST00000333674 FANCD2Q9BXW9 1451 aa17.71■□□□□ 0.43
PMS2P6-201ENST00000333674 MRC2Q9UBG0 1479 aa17.7■□□□□ 0.42
PMS2P6-201ENST00000333674 CEP164Q9UPV0 1460 aa17.7■□□□□ 0.42
PMS2P6-201ENST00000333674 DNAJC5Q9H3Z4 198 aa17.66■□□□□ 0.42
PMS2P6-201ENST00000333674 WDR62O43379 1518 aa17.62■□□□□ 0.41
PMS2P6-201ENST00000333674 SUPT5HO00267 1087 aaKnown RBP17.57■□□□□ 0.4
PMS2P6-201ENST00000333674 PRDM2Q13029 1718 aa17.53■□□□□ 0.4
PMS2P6-201ENST00000333674 URB2Q14146 1524 aaKnown RBP17.51■□□□□ 0.39
PMS2P6-201ENST00000333674 ABCC8Q09428 1581 aa17.43■□□□□ 0.38
PMS2P6-201ENST00000333674 TOPBP1Q92547 1522 aa17.39■□□□□ 0.37
PMS2P6-201ENST00000333674 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
PMS2P6-201ENST00000333674 IFT140Q96RY7 1462 aa17.34■□□□□ 0.37
PMS2P6-201ENST00000333674 OSCARQ8IYS5 282 aa17.26■□□□□ 0.35
PMS2P6-201ENST00000333674 PHF23Q9BUL5 403 aaPredicted RBP17.25■□□□□ 0.35
PMS2P6-201ENST00000333674 ZNF608Q9ULD9 1512 aaPredicted RBP17.25■□□□□ 0.35
PMS2P6-201ENST00000333674 POLA1P09884 1462 aaPredicted RBP17.23■□□□□ 0.35
PMS2P6-201ENST00000333674 SOGA1O94964 1423 aa17.22■□□□□ 0.35
PMS2P6-201ENST00000333674 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.34
PMS2P6-201ENST00000333674 TARBP1Q13395 1621 aaKnown RBP17.18■□□□□ 0.34
PMS2P6-201ENST00000333674 CUX1P39880 1505 aa17.17■□□□□ 0.34
PMS2P6-201ENST00000333674 FGD5Q6ZNL6 1462 aa17.17■□□□□ 0.34
PMS2P6-201ENST00000333674 RAD54L2Q9Y4B4 1467 aa17.17■□□□□ 0.34
PMS2P6-201ENST00000333674 EIF4G3O43432 1585 aaKnown RBP17.14■□□□□ 0.33
PMS2P6-201ENST00000333674 TDRD9Q8NDG6 1382 aaKnown RBP17.14■□□□□ 0.33
PMS2P6-201ENST00000333674 FBLN2P98095 1184 aa17.1■□□□□ 0.33
PMS2P6-201ENST00000333674 WDR97A6NE52 1622 aa17.05■□□□□ 0.32
PMS2P6-201ENST00000333674 WRNQ14191 1432 aaPredicted RBP eCLIP17.04■□□□□ 0.32
PMS2P6-201ENST00000333674 TRIM41Q8WV44 630 aa17.02■□□□□ 0.32
PMS2P6-201ENST00000333674 CHMP7Q8WUX9 453 aaPredicted RBP17.01■□□□□ 0.31
PMS2P6-201ENST00000333674 GRIN2BQ13224 1484 aa17■□□□□ 0.31
PMS2P6-201ENST00000333674 ABCA10Q8WWZ4 1543 aa16.99■□□□□ 0.31
PMS2P6-201ENST00000333674 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
PMS2P6-201ENST00000333674 SENP3Q9H4L4 574 aaPredicted RBP16.98■□□□□ 0.31
PMS2P6-201ENST00000333674 TOP2BQ02880 1626 aa16.98■□□□□ 0.31
PMS2P6-201ENST00000333674 SNAPC4Q5SXM2 1469 aa16.98■□□□□ 0.31
PMS2P6-201ENST00000333674 MAGI1Q96QZ7 1491 aaPredicted RBP16.96■□□□□ 0.31
PMS2P6-201ENST00000333674 BIVM-ERCC5R4GMW8 1640 aa16.96■□□□□ 0.3
PMS2P6-201ENST00000333674 CHD1O14646 1710 aa16.95■□□□□ 0.3
PMS2P6-201ENST00000333674 SYNJ1O43426 1573 aa16.94■□□□□ 0.3
PMS2P6-201ENST00000333674 SYNJ2O15056 1496 aa16.91■□□□□ 0.3
PMS2P6-201ENST00000333674 ABCA5Q8WWZ7 1642 aa16.88■□□□□ 0.29
PMS2P6-201ENST00000333674 PBRM1Q86U86 1689 aa16.88■□□□□ 0.29
PMS2P6-201ENST00000333674 ARHGEF11O15085 1522 aa16.86■□□□□ 0.29
PMS2P6-201ENST00000333674 RIMBP3CA6NJZ7 1639 aa16.86■□□□□ 0.29
PMS2P6-201ENST00000333674 RIMBP3BA6NNM3 1639 aa16.86■□□□□ 0.29
PMS2P6-201ENST00000333674 RIMBP3Q9UFD9 1639 aa16.86■□□□□ 0.29
PMS2P6-201ENST00000333674 CYB5RLQ6IPT4 315 aa16.83■□□□□ 0.28
PMS2P6-201ENST00000333674 ERICH3Q5RHP9 1530 aa16.79■□□□□ 0.28
PMS2P6-201ENST00000333674 FHAD1B1AJZ9 1412 aa16.79■□□□□ 0.28
PMS2P6-201ENST00000333674 CLASP1Q7Z460 1538 aa16.77■□□□□ 0.28
PMS2P6-201ENST00000333674 GRIN2AQ12879 1464 aa16.77■□□□□ 0.28
PMS2P6-201ENST00000333674 ADAMTS12P58397 1594 aa16.74■□□□□ 0.27
PMS2P6-201ENST00000333674 KIF27Q86VH2 1401 aa16.73■□□□□ 0.27
PMS2P6-201ENST00000333674 ARAP1Q96P48 1450 aa16.7■□□□□ 0.26
PMS2P6-201ENST00000333674 NUP160Q12769 1436 aa16.69■□□□□ 0.26
PMS2P6-201ENST00000333674 IGF1RP08069 1367 aa16.68■□□□□ 0.26
PMS2P6-201ENST00000333674 CEP170Q5SW79 1584 aa16.65■□□□□ 0.26
PMS2P6-201ENST00000333674 JPH4Q96JJ6 628 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms