RNA–Protein interactions for RNA: ENST00000331010.7

NTF3-201, Transcript of neurotrophin 3, humanhuman

APPRIS P3 BASIC

Gene NTF3, Length 1,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTF3-201ENST00000331010 AEBP2Q6ZN18 517 aaPredicted RBP28.81■■■□□ 2.2
NTF3-201ENST00000331010 NISCHQ9Y2I1 1504 aa28.69■■■□□ 2.18
NTF3-201ENST00000331010 CHIC1Q5VXU3 224 aa26.85■■□□□ 1.89
NTF3-201ENST00000331010 ABCC9O60706 1549 aa26.22■■□□□ 1.79
NTF3-201ENST00000331010 CCDC180Q9P1Z9 1646 aa26.09■■□□□ 1.77
NTF3-201ENST00000331010 RB1CC1Q8TDY2 1594 aa24.95■■□□□ 1.58
NTF3-201ENST00000331010 DNAJC5BQ9UF47 199 aa24.85■■□□□ 1.57
NTF3-201ENST00000331010 NACADO15069 1562 aa24.69■■□□□ 1.54
NTF3-201ENST00000331010 SENP3Q9H4L4 574 aaPredicted RBP24.64■■□□□ 1.54
NTF3-201ENST00000331010 UNC13AQ9UPW8 1703 aa24.43■■□□□ 1.5
NTF3-201ENST00000331010 MYO15BQ96JP2 1530 aa24.27■■□□□ 1.48
NTF3-201ENST00000331010 PABPN1Q86U42 306 aaKnown RBP eCLIP24.24■■□□□ 1.47
NTF3-201ENST00000331010 PHF23Q9BUL5 403 aaPredicted RBP24.21■■□□□ 1.47
NTF3-201ENST00000331010 BICRAQ9NZM4 1560 aa24.18■■□□□ 1.46
NTF3-201ENST00000331010 DCAF8L2P0C7V8 631 aa24.15■■□□□ 1.46
NTF3-201ENST00000331010 SHROOM4Q9ULL8 1493 aa23.99■■□□□ 1.43
NTF3-201ENST00000331010 DCAF1Q9Y4B6 1507 aa23.79■■□□□ 1.4
NTF3-201ENST00000331010 CC2D2AQ9P2K1 1620 aa23.77■■□□□ 1.4
NTF3-201ENST00000331010 ZCCHC6Q5VYS8 1495 aaKnown RBP23.72■■□□□ 1.39
NTF3-201ENST00000331010 CECR2Q9BXF3 1484 aa23.72■■□□□ 1.39
NTF3-201ENST00000331010 EIF4G1Q04637 1599 aaKnown RBP23.64■■□□□ 1.37
NTF3-201ENST00000331010 SCRIBQ14160 1630 aa23.57■■□□□ 1.36
NTF3-201ENST00000331010 DNAJC5Q9H3Z4 198 aa23.22■■□□□ 1.31
NTF3-201ENST00000331010 FOXD1Q16676 465 aa23.06■■□□□ 1.28
NTF3-201ENST00000331010 CUX2O14529 1486 aa22.92■■□□□ 1.26
NTF3-201ENST00000331010 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
NTF3-201ENST00000331010 ERCC6Q03468 1493 aa22.73■■□□□ 1.23
NTF3-201ENST00000331010 HMGXB3Q12766 1538 aa22.61■■□□□ 1.21
NTF3-201ENST00000331010 SMARCA2P51531 1590 aa22.58■■□□□ 1.2
NTF3-201ENST00000331010 ATAD2BQ9ULI0 1458 aa22.57■■□□□ 1.2
NTF3-201ENST00000331010 SMARCA4P51532 1647 aa22.51■■□□□ 1.19
NTF3-201ENST00000331010 POTEDQ86YR6 584 aa22.41■■□□□ 1.18
NTF3-201ENST00000331010 THOC2Q8NI27 1593 aaKnown RBP22.41■■□□□ 1.18
NTF3-201ENST00000331010 NESP48681 1621 aa22.4■■□□□ 1.18
NTF3-201ENST00000331010 BAZ1AQ9NRL2 1556 aaPredicted RBP22.36■■□□□ 1.17
NTF3-201ENST00000331010 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
NTF3-201ENST00000331010 PEG3Q9GZU2 1588 aa22.35■■□□□ 1.17
NTF3-201ENST00000331010 LAMC3Q9Y6N6 1575 aa22.35■■□□□ 1.17
NTF3-201ENST00000331010 KIF21AQ7Z4S6 1674 aa22.24■■□□□ 1.15
NTF3-201ENST00000331010 PDS5BQ9NTI5 1447 aa22.17■■□□□ 1.14
NTF3-201ENST00000331010 MROH2BQ7Z745 1585 aa22.05■■□□□ 1.12
NTF3-201ENST00000331010 MRC2Q9UBG0 1479 aa22.01■■□□□ 1.11
NTF3-201ENST00000331010 WDR62O43379 1518 aa22.01■■□□□ 1.11
NTF3-201ENST00000331010 CADPSQ9ULU8 1353 aa21.98■■□□□ 1.11
NTF3-201ENST00000331010 TRIM41Q8WV44 630 aa21.93■■□□□ 1.1
NTF3-201ENST00000331010 CEP164Q9UPV0 1460 aa21.84■■□□□ 1.09
NTF3-201ENST00000331010 MSH5O43196 834 aa21.82■■□□□ 1.08
NTF3-201ENST00000331010 WIZO95785 1651 aa21.79■■□□□ 1.08
NTF3-201ENST00000331010 FANCD2Q9BXW9 1451 aa21.74■■□□□ 1.07
NTF3-201ENST00000331010 CFTRP13569 1480 aa21.68■■□□□ 1.06
NTF3-201ENST00000331010 OSCARQ8IYS5 282 aa21.67■■□□□ 1.06
NTF3-201ENST00000331010 PRDM2Q13029 1718 aa21.62■■□□□ 1.05
NTF3-201ENST00000331010 URB2Q14146 1524 aaKnown RBP21.58■■□□□ 1.04
NTF3-201ENST00000331010 TOP2AP11388 1531 aaKnown RBP21.55■■□□□ 1.04
NTF3-201ENST00000331010 RIMBP3CA6NJZ7 1639 aa21.52■■□□□ 1.04
NTF3-201ENST00000331010 RIMBP3BA6NNM3 1639 aa21.52■■□□□ 1.04
NTF3-201ENST00000331010 RIMBP3Q9UFD9 1639 aa21.52■■□□□ 1.04
NTF3-201ENST00000331010 RSF1Q96T23 1441 aaPredicted RBP21.44■■□□□ 1.02
NTF3-201ENST00000331010 IFT140Q96RY7 1462 aa21.43■■□□□ 1.02
NTF3-201ENST00000331010 ARHGEF11O15085 1522 aa21.39■■□□□ 1.02
NTF3-201ENST00000331010 ZNF608Q9ULD9 1512 aaPredicted RBP21.34■■□□□ 1.01
NTF3-201ENST00000331010 PIAS4Q8N2W9 510 aaPredicted RBP21.32■■□□□ 1
NTF3-201ENST00000331010 EIF4G3O43432 1585 aaKnown RBP21.31■■□□□ 1
NTF3-201ENST00000331010 ABCC8Q09428 1581 aa21.31■■□□□ 1
NTF3-201ENST00000331010 TOPBP1Q92547 1522 aa21.29■■□□□ 1
NTF3-201ENST00000331010 CHD1O14646 1710 aa21.25■□□□□ 0.99
NTF3-201ENST00000331010 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
NTF3-201ENST00000331010 CCDC88BA6NC98 1476 aa21.21■□□□□ 0.99
NTF3-201ENST00000331010 TARBP1Q13395 1621 aaKnown RBP21.18■□□□□ 0.98
NTF3-201ENST00000331010 ARAP1Q96P48 1450 aa21.13■□□□□ 0.97
NTF3-201ENST00000331010 CYB5RLQ6IPT4 315 aa21.12■□□□□ 0.97
NTF3-201ENST00000331010 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
NTF3-201ENST00000331010 AQRO60306 1485 aaKnown RBP eCLIP21.07■□□□□ 0.96
NTF3-201ENST00000331010 PPP6R1Q9UPN7 881 aa21.06■□□□□ 0.96
NTF3-201ENST00000331010 POLA1P09884 1462 aaPredicted RBP21.05■□□□□ 0.96
NTF3-201ENST00000331010 TRHP20396 242 aaPredicted RBP21.01■□□□□ 0.95
NTF3-201ENST00000331010 PLPPR3Q6T4P5 718 aa21.01■□□□□ 0.95
NTF3-201ENST00000331010 CLASP1Q7Z460 1538 aa20.98■□□□□ 0.95
NTF3-201ENST00000331010 SYNJ1O43426 1573 aa20.95■□□□□ 0.94
NTF3-201ENST00000331010 FBLN2P98095 1184 aa20.95■□□□□ 0.94
NTF3-201ENST00000331010 MAGI1Q96QZ7 1491 aaPredicted RBP20.92■□□□□ 0.94
NTF3-201ENST00000331010 SNAPC4Q5SXM2 1469 aa20.91■□□□□ 0.94
NTF3-201ENST00000331010 ADRA2BP18089 450 aa20.9■□□□□ 0.94
NTF3-201ENST00000331010 RAD54L2Q9Y4B4 1467 aa20.89■□□□□ 0.94
NTF3-201ENST00000331010 SOGA1O94964 1423 aa20.89■□□□□ 0.94
NTF3-201ENST00000331010 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
NTF3-201ENST00000331010 FGD5Q6ZNL6 1462 aa20.84■□□□□ 0.93
NTF3-201ENST00000331010 SYNJ2O15056 1496 aa20.82■□□□□ 0.92
NTF3-201ENST00000331010 GRIN2BQ13224 1484 aa20.82■□□□□ 0.92
NTF3-201ENST00000331010 PBRM1Q86U86 1689 aa20.8■□□□□ 0.92
NTF3-201ENST00000331010 CHMP7Q8WUX9 453 aaPredicted RBP20.79■□□□□ 0.92
NTF3-201ENST00000331010 CUX1P39880 1505 aa20.76■□□□□ 0.91
NTF3-201ENST00000331010 GAPVD1Q14C86 1478 aa20.71■□□□□ 0.91
NTF3-201ENST00000331010 ABCA5Q8WWZ7 1642 aa20.68■□□□□ 0.9
NTF3-201ENST00000331010 ABCA10Q8WWZ4 1543 aa20.63■□□□□ 0.89
NTF3-201ENST00000331010 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
NTF3-201ENST00000331010 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
NTF3-201ENST00000331010 SHROOM2Q13796 1616 aa20.53■□□□□ 0.88
NTF3-201ENST00000331010 CEP170Q5SW79 1584 aa20.52■□□□□ 0.88
NTF3-201ENST00000331010 NUP160Q12769 1436 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms