RNA–Protein interactions for RNA: ENST00000330953.5

CCR4-201, Transcript of C-C motif chemokine receptor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCR4, Length 3,095 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR4-201ENST00000330953 NISCHQ9Y2I1 1504 aa21.61■■□□□ 1.05
CCR4-201ENST00000330953 CCDC180Q9P1Z9 1646 aa19.49■□□□□ 0.71
CCR4-201ENST00000330953 DCAF1Q9Y4B6 1507 aa18.4■□□□□ 0.54
CCR4-201ENST00000330953 MYO15BQ96JP2 1530 aa18.39■□□□□ 0.53
CCR4-201ENST00000330953 ZCCHC6Q5VYS8 1495 aaKnown RBP18.22■□□□□ 0.51
CCR4-201ENST00000330953 NACADO15069 1562 aa17.95■□□□□ 0.46
CCR4-201ENST00000330953 RB1CC1Q8TDY2 1594 aa17.7■□□□□ 0.42
CCR4-201ENST00000330953 SHROOM4Q9ULL8 1493 aa17.55■□□□□ 0.4
CCR4-201ENST00000330953 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
CCR4-201ENST00000330953 ABCC9O60706 1549 aa17.49■□□□□ 0.39
CCR4-201ENST00000330953 BICRAQ9NZM4 1560 aa17.21■□□□□ 0.34
CCR4-201ENST00000330953 SCRIBQ14160 1630 aa17.03■□□□□ 0.32
CCR4-201ENST00000330953 PEG3Q9GZU2 1588 aa16.91■□□□□ 0.3
CCR4-201ENST00000330953 BAZ1AQ9NRL2 1556 aaPredicted RBP16.75■□□□□ 0.27
CCR4-201ENST00000330953 SMARCA4P51532 1647 aa16.72■□□□□ 0.27
CCR4-201ENST00000330953 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
CCR4-201ENST00000330953 HMGXB3Q12766 1538 aa16.57■□□□□ 0.24
CCR4-201ENST00000330953 EIF4G1Q04637 1599 aaKnown RBP16.55■□□□□ 0.24
CCR4-201ENST00000330953 MROH2BQ7Z745 1585 aa16.46■□□□□ 0.23
CCR4-201ENST00000330953 RSF1Q96T23 1441 aaPredicted RBP16.45■□□□□ 0.22
CCR4-201ENST00000330953 TOP2AP11388 1531 aaKnown RBP16.43■□□□□ 0.22
CCR4-201ENST00000330953 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
CCR4-201ENST00000330953 CECR2Q9BXF3 1484 aa16.42■□□□□ 0.22
CCR4-201ENST00000330953 DCAF8L2P0C7V8 631 aa16.4■□□□□ 0.22
CCR4-201ENST00000330953 PRDM2Q13029 1718 aa16.35■□□□□ 0.21
CCR4-201ENST00000330953 ATAD2BQ9ULI0 1458 aa16.34■□□□□ 0.21
CCR4-201ENST00000330953 WIZO95785 1651 aa16.33■□□□□ 0.2
CCR4-201ENST00000330953 CC2D2AQ9P2K1 1620 aa16.3■□□□□ 0.2
CCR4-201ENST00000330953 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
CCR4-201ENST00000330953 PABPN1Q86U42 306 aaKnown RBP eCLIP16.08■□□□□ 0.16
CCR4-201ENST00000330953 LAMC3Q9Y6N6 1575 aa15.99■□□□□ 0.15
CCR4-201ENST00000330953 CCDC88BA6NC98 1476 aa15.95■□□□□ 0.14
CCR4-201ENST00000330953 CFTRP13569 1480 aa15.92■□□□□ 0.14
CCR4-201ENST00000330953 BIVM-ERCC5R4GMW8 1640 aa15.84■□□□□ 0.13
CCR4-201ENST00000330953 WDR97A6NE52 1622 aa15.77■□□□□ 0.12
CCR4-201ENST00000330953 CADPSQ9ULU8 1353 aa15.71■□□□□ 0.1
CCR4-201ENST00000330953 TOP2BQ02880 1626 aa15.69■□□□□ 0.1
CCR4-201ENST00000330953 ABCC8Q09428 1581 aa15.67■□□□□ 0.1
CCR4-201ENST00000330953 KIF21AQ7Z4S6 1674 aa15.62■□□□□ 0.09
CCR4-201ENST00000330953 THOC2Q8NI27 1593 aaKnown RBP15.62■□□□□ 0.09
CCR4-201ENST00000330953 DNMBPQ6XZF7 1577 aa15.61■□□□□ 0.09
CCR4-201ENST00000330953 WDR62O43379 1518 aa15.61■□□□□ 0.09
CCR4-201ENST00000330953 PDS5BQ9NTI5 1447 aa15.53■□□□□ 0.08
CCR4-201ENST00000330953 DNAJC5BQ9UF47 199 aa15.49■□□□□ 0.07
CCR4-201ENST00000330953 FANCD2Q9BXW9 1451 aa15.49■□□□□ 0.07
CCR4-201ENST00000330953 SYNJ1O43426 1573 aa15.49■□□□□ 0.07
CCR4-201ENST00000330953 CUX1P39880 1505 aa15.49■□□□□ 0.07
CCR4-201ENST00000330953 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.07
CCR4-201ENST00000330953 MRC2Q9UBG0 1479 aa15.45■□□□□ 0.06
CCR4-201ENST00000330953 TARBP1Q13395 1621 aaKnown RBP15.45■□□□□ 0.06
CCR4-201ENST00000330953 SUPT5HO00267 1087 aaKnown RBP15.42■□□□□ 0.06
CCR4-201ENST00000330953 TOPBP1Q92547 1522 aa15.41■□□□□ 0.06
CCR4-201ENST00000330953 ABCA5Q8WWZ7 1642 aa15.4■□□□□ 0.06
CCR4-201ENST00000330953 URB2Q14146 1524 aaKnown RBP15.4■□□□□ 0.06
CCR4-201ENST00000330953 WRNQ14191 1432 aaPredicted RBP eCLIP15.39■□□□□ 0.05
CCR4-201ENST00000330953 EEA1Q15075 1411 aa15.39■□□□□ 0.05
CCR4-201ENST00000330953 NESP48681 1621 aa15.38■□□□□ 0.05
CCR4-201ENST00000330953 ABCA10Q8WWZ4 1543 aa15.37■□□□□ 0.05
CCR4-201ENST00000330953 CUX2O14529 1486 aa15.33■□□□□ 0.04
CCR4-201ENST00000330953 CUL7Q14999 1698 aa15.3■□□□□ 0.04
CCR4-201ENST00000330953 KIF21BO75037 1637 aa15.3■□□□□ 0.04
CCR4-201ENST00000330953 ERICH3Q5RHP9 1530 aa15.27■□□□□ 0.04
CCR4-201ENST00000330953 PBRM1Q86U86 1689 aa15.27■□□□□ 0.03
CCR4-201ENST00000330953 IFT140Q96RY7 1462 aa15.26■□□□□ 0.03
CCR4-201ENST00000330953 POLA1P09884 1462 aaPredicted RBP15.25■□□□□ 0.03
CCR4-201ENST00000330953 FGD5Q6ZNL6 1462 aa15.23■□□□□ 0.03
CCR4-201ENST00000330953 CHIC1Q5VXU3 224 aa15.18■□□□□ 0.02
CCR4-201ENST00000330953 EIF4G3O43432 1585 aaKnown RBP15.12■□□□□ 0.01
CCR4-201ENST00000330953 ADAMTS12P58397 1594 aa15.11■□□□□ 0.01
CCR4-201ENST00000330953 PRXQ9BXM0 1461 aa15.11■□□□□ 0.01
CCR4-201ENST00000330953 CTTNBP2Q8WZ74 1663 aa15.06■□□□□ 0
CCR4-201ENST00000330953 MAGI1Q96QZ7 1491 aaPredicted RBP15.06■□□□□ 0
CCR4-201ENST00000330953 KIF27Q86VH2 1401 aa15.05■□□□□ -0
CCR4-201ENST00000330953 ERCC6Q03468 1493 aa15.05■□□□□ -0
CCR4-201ENST00000330953 SOGA1O94964 1423 aa15.03■□□□□ -0
CCR4-201ENST00000330953 GRIN2BQ13224 1484 aa15□□□□□ -0.01
CCR4-201ENST00000330953 SHROOM2Q13796 1616 aa14.97□□□□□ -0.01
CCR4-201ENST00000330953 GAPVD1Q14C86 1478 aa14.97□□□□□ -0.01
CCR4-201ENST00000330953 RAD54L2Q9Y4B4 1467 aa14.93□□□□□ -0.02
CCR4-201ENST00000330953 IGF1RP08069 1367 aa14.92□□□□□ -0.02
CCR4-201ENST00000330953 FHAD1B1AJZ9 1412 aa14.92□□□□□ -0.02
CCR4-201ENST00000330953 SAMD9Q5K651 1589 aa14.91□□□□□ -0.02
CCR4-201ENST00000330953 GOLGA3Q08378 1498 aa14.9□□□□□ -0.02
CCR4-201ENST00000330953 RUSC2Q8N2Y8 1516 aa14.89□□□□□ -0.03
CCR4-201ENST00000330953 RAPGEF2Q9Y4G8 1499 aa14.89□□□□□ -0.03
CCR4-201ENST00000330953 SYNJ2O15056 1496 aa14.88□□□□□ -0.03
CCR4-201ENST00000330953 EFCAB5A4FU69 1503 aa14.88□□□□□ -0.03
CCR4-201ENST00000330953 NUP160Q12769 1436 aa14.87□□□□□ -0.03
CCR4-201ENST00000330953 CLASP1Q7Z460 1538 aa14.87□□□□□ -0.03
CCR4-201ENST00000330953 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
CCR4-201ENST00000330953 CHD1O14646 1710 aa14.85□□□□□ -0.03
CCR4-201ENST00000330953 UGGT2Q9NYU1 1516 aa14.85□□□□□ -0.03
CCR4-201ENST00000330953 ZNF608Q9ULD9 1512 aaPredicted RBP14.84□□□□□ -0.03
CCR4-201ENST00000330953 TNIKQ9UKE5 1360 aa14.83□□□□□ -0.04
CCR4-201ENST00000330953 GRIN2AQ12879 1464 aa14.81□□□□□ -0.04
CCR4-201ENST00000330953 SLC24A1O60721 1099 aa14.79□□□□□ -0.04
CCR4-201ENST00000330953 CEP170Q5SW79 1584 aa14.79□□□□□ -0.04
CCR4-201ENST00000330953 SNAPC4Q5SXM2 1469 aa14.77□□□□□ -0.04
CCR4-201ENST00000330953 IQGAP2Q13576 1575 aa14.75□□□□□ -0.05
CCR4-201ENST00000330953 MAP3K1Q13233 1512 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms