RNA–Protein interactions for RNA: ENST00000328599.4

TRMT12-201, Transcript of tRNA methyltransferase 12 homolog, humanhuman

APPRIS P1 BASIC

Gene TRMT12, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT12-201ENST00000328599 NISCHQ9Y2I1 1504 aa27.35■■□□□ 1.97
TRMT12-201ENST00000328599 CCDC180Q9P1Z9 1646 aa24.62■■□□□ 1.53
TRMT12-201ENST00000328599 ABCC9O60706 1549 aa24.46■■□□□ 1.51
TRMT12-201ENST00000328599 RB1CC1Q8TDY2 1594 aa23.41■■□□□ 1.34
TRMT12-201ENST00000328599 NACADO15069 1562 aa23.26■■□□□ 1.31
TRMT12-201ENST00000328599 DCAF8L2P0C7V8 631 aa23.07■■□□□ 1.28
TRMT12-201ENST00000328599 MYO15BQ96JP2 1530 aa23■■□□□ 1.27
TRMT12-201ENST00000328599 DNAJC5BQ9UF47 199 aa22.96■■□□□ 1.27
TRMT12-201ENST00000328599 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
TRMT12-201ENST00000328599 UNC13AQ9UPW8 1703 aa22.82■■□□□ 1.24
TRMT12-201ENST00000328599 BICRAQ9NZM4 1560 aa22.68■■□□□ 1.22
TRMT12-201ENST00000328599 PABPN1Q86U42 306 aaKnown RBP eCLIP22.67■■□□□ 1.22
TRMT12-201ENST00000328599 DCAF1Q9Y4B6 1507 aa22.64■■□□□ 1.22
TRMT12-201ENST00000328599 SHROOM4Q9ULL8 1493 aa22.57■■□□□ 1.2
TRMT12-201ENST00000328599 SCRIBQ14160 1630 aa22.23■■□□□ 1.15
TRMT12-201ENST00000328599 CC2D2AQ9P2K1 1620 aa22.17■■□□□ 1.14
TRMT12-201ENST00000328599 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
TRMT12-201ENST00000328599 CECR2Q9BXF3 1484 aa22.1■■□□□ 1.13
TRMT12-201ENST00000328599 SUPT5HO00267 1087 aaKnown RBP21.57■■□□□ 1.04
TRMT12-201ENST00000328599 NCAPD3P42695 1498 aa21.44■■□□□ 1.02
TRMT12-201ENST00000328599 SMARCA2P51531 1590 aa21.31■■□□□ 1
TRMT12-201ENST00000328599 ATAD2BQ9ULI0 1458 aa21.31■■□□□ 1
TRMT12-201ENST00000328599 HMGXB3Q12766 1538 aa21.31■■□□□ 1
TRMT12-201ENST00000328599 SMARCA4P51532 1647 aa21.29■■□□□ 1
TRMT12-201ENST00000328599 CUX2O14529 1486 aa21.28■■□□□ 1
TRMT12-201ENST00000328599 DNAJC5Q9H3Z4 198 aa21.25■□□□□ 0.99
TRMT12-201ENST00000328599 MROH2BQ7Z745 1585 aa21.24■□□□□ 0.99
TRMT12-201ENST00000328599 RSF1Q96T23 1441 aaPredicted RBP21.22■□□□□ 0.99
TRMT12-201ENST00000328599 BAZ1AQ9NRL2 1556 aaPredicted RBP21.19■□□□□ 0.98
TRMT12-201ENST00000328599 PEG3Q9GZU2 1588 aa21.16■□□□□ 0.98
TRMT12-201ENST00000328599 ERCC6Q03468 1493 aa21.16■□□□□ 0.98
TRMT12-201ENST00000328599 BAZ1BQ9UIG0 1483 aaKnown RBP21.09■□□□□ 0.97
TRMT12-201ENST00000328599 WIZO95785 1651 aa21.05■□□□□ 0.96
TRMT12-201ENST00000328599 LAMC3Q9Y6N6 1575 aa20.99■□□□□ 0.95
TRMT12-201ENST00000328599 NESP48681 1621 aa20.98■□□□□ 0.95
TRMT12-201ENST00000328599 THOC2Q8NI27 1593 aaKnown RBP20.91■□□□□ 0.94
TRMT12-201ENST00000328599 PDS5BQ9NTI5 1447 aa20.82■□□□□ 0.92
TRMT12-201ENST00000328599 KIF21AQ7Z4S6 1674 aa20.78■□□□□ 0.92
TRMT12-201ENST00000328599 CADPSQ9ULU8 1353 aa20.73■□□□□ 0.91
TRMT12-201ENST00000328599 TOP2AP11388 1531 aaKnown RBP20.69■□□□□ 0.9
TRMT12-201ENST00000328599 MRC2Q9UBG0 1479 aa20.65■□□□□ 0.9
TRMT12-201ENST00000328599 WDR62O43379 1518 aa20.63■□□□□ 0.89
TRMT12-201ENST00000328599 CCDC88BA6NC98 1476 aa20.6■□□□□ 0.89
TRMT12-201ENST00000328599 CEP164Q9UPV0 1460 aa20.53■□□□□ 0.88
TRMT12-201ENST00000328599 CFTRP13569 1480 aa20.5■□□□□ 0.87
TRMT12-201ENST00000328599 FANCD2Q9BXW9 1451 aa20.48■□□□□ 0.87
TRMT12-201ENST00000328599 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.85
TRMT12-201ENST00000328599 PRDM2Q13029 1718 aa20.37■□□□□ 0.85
TRMT12-201ENST00000328599 URB2Q14146 1524 aaKnown RBP20.31■□□□□ 0.84
TRMT12-201ENST00000328599 ABCC8Q09428 1581 aa20.19■□□□□ 0.82
TRMT12-201ENST00000328599 OSCARQ8IYS5 282 aa20.18■□□□□ 0.82
TRMT12-201ENST00000328599 IFT140Q96RY7 1462 aa20.17■□□□□ 0.82
TRMT12-201ENST00000328599 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
TRMT12-201ENST00000328599 TOPBP1Q92547 1522 aa20.1■□□□□ 0.81
TRMT12-201ENST00000328599 HRCP23327 699 aa20.07■□□□□ 0.8
TRMT12-201ENST00000328599 DNMBPQ6XZF7 1577 aa20.06■□□□□ 0.8
TRMT12-201ENST00000328599 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.8
TRMT12-201ENST00000328599 FAM9AQ8IZU1 332 aaPredicted RBP20■□□□□ 0.79
TRMT12-201ENST00000328599 EIF4G3O43432 1585 aaKnown RBP19.98■□□□□ 0.79
TRMT12-201ENST00000328599 WRNQ14191 1432 aaPredicted RBP eCLIP19.96■□□□□ 0.79
TRMT12-201ENST00000328599 RIMBP3CA6NJZ7 1639 aa19.96■□□□□ 0.79
TRMT12-201ENST00000328599 RIMBP3BA6NNM3 1639 aa19.96■□□□□ 0.79
TRMT12-201ENST00000328599 RIMBP3Q9UFD9 1639 aa19.96■□□□□ 0.79
TRMT12-201ENST00000328599 TARBP1Q13395 1621 aaKnown RBP19.95■□□□□ 0.78
TRMT12-201ENST00000328599 SYNJ1O43426 1573 aa19.92■□□□□ 0.78
TRMT12-201ENST00000328599 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
TRMT12-201ENST00000328599 WDR97A6NE52 1622 aa19.89■□□□□ 0.77
TRMT12-201ENST00000328599 ARHGEF11O15085 1522 aa19.88■□□□□ 0.77
TRMT12-201ENST00000328599 POLA1P09884 1462 aaPredicted RBP19.87■□□□□ 0.77
TRMT12-201ENST00000328599 CUX1P39880 1505 aa19.84■□□□□ 0.77
TRMT12-201ENST00000328599 CHD1O14646 1710 aa19.84■□□□□ 0.77
TRMT12-201ENST00000328599 AQRO60306 1485 aaKnown RBP eCLIP19.81■□□□□ 0.76
TRMT12-201ENST00000328599 LOC105371045A0A1W2PR82 267 aa19.79■□□□□ 0.76
TRMT12-201ENST00000328599 SOGA1O94964 1423 aa19.78■□□□□ 0.76
TRMT12-201ENST00000328599 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
TRMT12-201ENST00000328599 RAD54L2Q9Y4B4 1467 aa19.73■□□□□ 0.75
TRMT12-201ENST00000328599 TOP2BQ02880 1626 aa19.73■□□□□ 0.75
TRMT12-201ENST00000328599 FGD5Q6ZNL6 1462 aa19.72■□□□□ 0.75
TRMT12-201ENST00000328599 MAGI1Q96QZ7 1491 aaPredicted RBP19.69■□□□□ 0.74
TRMT12-201ENST00000328599 ARAP1Q96P48 1450 aa19.67■□□□□ 0.74
TRMT12-201ENST00000328599 CLASP1Q7Z460 1538 aa19.67■□□□□ 0.74
TRMT12-201ENST00000328599 BIVM-ERCC5R4GMW8 1640 aa19.67■□□□□ 0.74
TRMT12-201ENST00000328599 TDRD9Q8NDG6 1382 aaKnown RBP19.67■□□□□ 0.74
TRMT12-201ENST00000328599 SNAPC4Q5SXM2 1469 aa19.66■□□□□ 0.74
TRMT12-201ENST00000328599 GRIN2BQ13224 1484 aa19.65■□□□□ 0.74
TRMT12-201ENST00000328599 PCGF6Q9BYE7 350 aa19.63■□□□□ 0.73
TRMT12-201ENST00000328599 FBLN2P98095 1184 aa19.61■□□□□ 0.73
TRMT12-201ENST00000328599 CYB5RLQ6IPT4 315 aa19.61■□□□□ 0.73
TRMT12-201ENST00000328599 SYNJ2O15056 1496 aa19.6■□□□□ 0.73
TRMT12-201ENST00000328599 PBRM1Q86U86 1689 aa19.58■□□□□ 0.72
TRMT12-201ENST00000328599 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
TRMT12-201ENST00000328599 CHMP7Q8WUX9 453 aaPredicted RBP19.55■□□□□ 0.72
TRMT12-201ENST00000328599 ABCA5Q8WWZ7 1642 aa19.54■□□□□ 0.72
TRMT12-201ENST00000328599 GAPVD1Q14C86 1478 aa19.54■□□□□ 0.72
TRMT12-201ENST00000328599 CSRNP3Q8WYN3 585 aa19.52■□□□□ 0.72
TRMT12-201ENST00000328599 PPARGC1BQ86YN6 1023 aaKnown RBP19.47■□□□□ 0.71
TRMT12-201ENST00000328599 KIF27Q86VH2 1401 aa19.43■□□□□ 0.7
TRMT12-201ENST00000328599 TRHP20396 242 aaPredicted RBP19.41■□□□□ 0.7
TRMT12-201ENST00000328599 ADAMTS12P58397 1594 aa19.39■□□□□ 0.69
TRMT12-201ENST00000328599 GRIN2AQ12879 1464 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms