RNA–Protein interactions for RNA: ENST00000324229.10

CALCB-201, Transcript of calcitonin related polypeptide beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALCB, Length 1,070 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCB-201ENST00000324229 NISCHQ9Y2I1 1504 aa27.77■■■□□ 2.04
CALCB-201ENST00000324229 CCDC180Q9P1Z9 1646 aa24.79■■□□□ 1.56
CALCB-201ENST00000324229 ABCC9O60706 1549 aa24.18■■□□□ 1.46
CALCB-201ENST00000324229 RB1CC1Q8TDY2 1594 aa23.33■■□□□ 1.33
CALCB-201ENST00000324229 NACADO15069 1562 aa23.29■■□□□ 1.32
CALCB-201ENST00000324229 MYO15BQ96JP2 1530 aa23.18■■□□□ 1.3
CALCB-201ENST00000324229 ZCCHC6Q5VYS8 1495 aaKnown RBP23.14■■□□□ 1.29
CALCB-201ENST00000324229 DCAF8L2P0C7V8 631 aa23.08■■□□□ 1.29
CALCB-201ENST00000324229 DCAF1Q9Y4B6 1507 aa23.04■■□□□ 1.28
CALCB-201ENST00000324229 AEBP2Q6ZN18 517 aaPredicted RBP22.77■■□□□ 1.24
CALCB-201ENST00000324229 UNC13AQ9UPW8 1703 aa22.76■■□□□ 1.23
CALCB-201ENST00000324229 BICRAQ9NZM4 1560 aa22.57■■□□□ 1.2
CALCB-201ENST00000324229 PABPN1Q86U42 306 aaKnown RBP eCLIP22.53■■□□□ 1.2
CALCB-201ENST00000324229 SCRIBQ14160 1630 aa22.52■■□□□ 1.2
CALCB-201ENST00000324229 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
CALCB-201ENST00000324229 DNAJC5BQ9UF47 199 aa22.32■■□□□ 1.16
CALCB-201ENST00000324229 EIF4G1Q04637 1599 aaKnown RBP22■■□□□ 1.11
CALCB-201ENST00000324229 CC2D2AQ9P2K1 1620 aa21.91■■□□□ 1.1
CALCB-201ENST00000324229 CHIC1Q5VXU3 224 aa21.86■■□□□ 1.09
CALCB-201ENST00000324229 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.07
CALCB-201ENST00000324229 SMARCA4P51532 1647 aa21.57■■□□□ 1.04
CALCB-201ENST00000324229 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
CALCB-201ENST00000324229 SMARCA2P51531 1590 aa21.47■■□□□ 1.03
CALCB-201ENST00000324229 NCAPD3P42695 1498 aa21.46■■□□□ 1.03
CALCB-201ENST00000324229 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.03
CALCB-201ENST00000324229 PEG3Q9GZU2 1588 aa21.4■■□□□ 1.02
CALCB-201ENST00000324229 HMGXB3Q12766 1538 aa21.39■■□□□ 1.02
CALCB-201ENST00000324229 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
CALCB-201ENST00000324229 BAZ1BQ9UIG0 1483 aaKnown RBP21.28■■□□□ 1
CALCB-201ENST00000324229 WIZO95785 1651 aa21.13■□□□□ 0.97
CALCB-201ENST00000324229 RSF1Q96T23 1441 aaPredicted RBP21.1■□□□□ 0.97
CALCB-201ENST00000324229 TOP2AP11388 1531 aaKnown RBP20.96■□□□□ 0.95
CALCB-201ENST00000324229 LAMC3Q9Y6N6 1575 aa20.93■□□□□ 0.94
CALCB-201ENST00000324229 NESP48681 1621 aa20.89■□□□□ 0.94
CALCB-201ENST00000324229 ERCC6Q03468 1493 aa20.88■□□□□ 0.93
CALCB-201ENST00000324229 CADPSQ9ULU8 1353 aa20.82■□□□□ 0.92
CALCB-201ENST00000324229 PDS5BQ9NTI5 1447 aa20.78■□□□□ 0.92
CALCB-201ENST00000324229 CUX2O14529 1486 aa20.75■□□□□ 0.91
CALCB-201ENST00000324229 KIF21AQ7Z4S6 1674 aa20.7■□□□□ 0.9
CALCB-201ENST00000324229 CFTRP13569 1480 aa20.69■□□□□ 0.9
CALCB-201ENST00000324229 THOC2Q8NI27 1593 aaKnown RBP20.68■□□□□ 0.9
CALCB-201ENST00000324229 CCDC88BA6NC98 1476 aa20.66■□□□□ 0.9
CALCB-201ENST00000324229 DNAJC5Q9H3Z4 198 aa20.6■□□□□ 0.89
CALCB-201ENST00000324229 PRDM2Q13029 1718 aa20.59■□□□□ 0.89
CALCB-201ENST00000324229 FANCD2Q9BXW9 1451 aa20.58■□□□□ 0.89
CALCB-201ENST00000324229 CEP164Q9UPV0 1460 aa20.58■□□□□ 0.89
CALCB-201ENST00000324229 MRC2Q9UBG0 1479 aa20.56■□□□□ 0.88
CALCB-201ENST00000324229 WDR62O43379 1518 aa20.51■□□□□ 0.87
CALCB-201ENST00000324229 SUPT5HO00267 1087 aaKnown RBP20.43■□□□□ 0.86
CALCB-201ENST00000324229 URB2Q14146 1524 aaKnown RBP20.37■□□□□ 0.85
CALCB-201ENST00000324229 ABCC8Q09428 1581 aa20.29■□□□□ 0.84
CALCB-201ENST00000324229 TOPBP1Q92547 1522 aa20.25■□□□□ 0.83
CALCB-201ENST00000324229 DNMBPQ6XZF7 1577 aa20.25■□□□□ 0.83
CALCB-201ENST00000324229 IFT140Q96RY7 1462 aa20.16■□□□□ 0.82
CALCB-201ENST00000324229 POLA1P09884 1462 aaPredicted RBP20.07■□□□□ 0.8
CALCB-201ENST00000324229 CUX1P39880 1505 aa20.06■□□□□ 0.8
CALCB-201ENST00000324229 TARBP1Q13395 1621 aaKnown RBP20.04■□□□□ 0.8
CALCB-201ENST00000324229 ZNF608Q9ULD9 1512 aaPredicted RBP20.01■□□□□ 0.79
CALCB-201ENST00000324229 FGD5Q6ZNL6 1462 aa20■□□□□ 0.79
CALCB-201ENST00000324229 EIF4G3O43432 1585 aaKnown RBP19.99■□□□□ 0.79
CALCB-201ENST00000324229 WDR97A6NE52 1622 aa19.97■□□□□ 0.79
CALCB-201ENST00000324229 SOGA1O94964 1423 aa19.96■□□□□ 0.79
CALCB-201ENST00000324229 RAD54L2Q9Y4B4 1467 aa19.93■□□□□ 0.78
CALCB-201ENST00000324229 BIVM-ERCC5R4GMW8 1640 aa19.92■□□□□ 0.78
CALCB-201ENST00000324229 WRNQ14191 1432 aaPredicted RBP eCLIP19.92■□□□□ 0.78
CALCB-201ENST00000324229 TOP2BQ02880 1626 aa19.91■□□□□ 0.78
CALCB-201ENST00000324229 AQRO60306 1485 aaKnown RBP eCLIP19.88■□□□□ 0.77
CALCB-201ENST00000324229 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
CALCB-201ENST00000324229 ABCA10Q8WWZ4 1543 aa19.85■□□□□ 0.77
CALCB-201ENST00000324229 TDRD9Q8NDG6 1382 aaKnown RBP19.82■□□□□ 0.76
CALCB-201ENST00000324229 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
CALCB-201ENST00000324229 ABCA5Q8WWZ7 1642 aa19.78■□□□□ 0.76
CALCB-201ENST00000324229 GRIN2BQ13224 1484 aa19.78■□□□□ 0.76
CALCB-201ENST00000324229 MAGI1Q96QZ7 1491 aaPredicted RBP19.76■□□□□ 0.75
CALCB-201ENST00000324229 GAPVD1Q14C86 1478 aa19.75■□□□□ 0.75
CALCB-201ENST00000324229 PBRM1Q86U86 1689 aa19.74■□□□□ 0.75
CALCB-201ENST00000324229 SNAPC4Q5SXM2 1469 aa19.73■□□□□ 0.75
CALCB-201ENST00000324229 CHD1O14646 1710 aa19.73■□□□□ 0.75
CALCB-201ENST00000324229 SYNJ2O15056 1496 aa19.66■□□□□ 0.74
CALCB-201ENST00000324229 ERICH3Q5RHP9 1530 aa19.62■□□□□ 0.73
CALCB-201ENST00000324229 FBLN2P98095 1184 aa19.62■□□□□ 0.73
CALCB-201ENST00000324229 CHMP7Q8WUX9 453 aaPredicted RBP19.6■□□□□ 0.73
CALCB-201ENST00000324229 ADAMTS12P58397 1594 aa19.59■□□□□ 0.73
CALCB-201ENST00000324229 TRIM41Q8WV44 630 aa19.57■□□□□ 0.72
CALCB-201ENST00000324229 FHAD1B1AJZ9 1412 aa19.54■□□□□ 0.72
CALCB-201ENST00000324229 CLASP1Q7Z460 1538 aa19.54■□□□□ 0.72
CALCB-201ENST00000324229 GRIN2AQ12879 1464 aa19.52■□□□□ 0.72
CALCB-201ENST00000324229 KIF27Q86VH2 1401 aa19.51■□□□□ 0.71
CALCB-201ENST00000324229 RIMBP3CA6NJZ7 1639 aa19.51■□□□□ 0.71
CALCB-201ENST00000324229 RIMBP3BA6NNM3 1639 aa19.51■□□□□ 0.71
CALCB-201ENST00000324229 RIMBP3Q9UFD9 1639 aa19.51■□□□□ 0.71
CALCB-201ENST00000324229 ARHGEF11O15085 1522 aa19.51■□□□□ 0.71
CALCB-201ENST00000324229 CUL7Q14999 1698 aa19.45■□□□□ 0.7
CALCB-201ENST00000324229 NUP160Q12769 1436 aa19.44■□□□□ 0.7
CALCB-201ENST00000324229 SENP3Q9H4L4 574 aaPredicted RBP19.41■□□□□ 0.7
CALCB-201ENST00000324229 IGF1RP08069 1367 aa19.41■□□□□ 0.7
CALCB-201ENST00000324229 CEP170Q5SW79 1584 aa19.4■□□□□ 0.7
CALCB-201ENST00000324229 ARAP1Q96P48 1450 aa19.33■□□□□ 0.68
CALCB-201ENST00000324229 SHROOM2Q13796 1616 aa19.32■□□□□ 0.68
CALCB-201ENST00000324229 RUSC2Q8N2Y8 1516 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms