RNA–Protein interactions for RNA: ENST00000322272.11

TNFSF12-202, Transcript of TNF superfamily member 12, humanhuman

TSL 1 (best)

Gene TNFSF12, Length 1,625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-202ENST00000322272 NISCHQ9Y2I1 1504 aa56.61■■■■■ 6.65
TNFSF12-202ENST00000322272 CCDC180Q9P1Z9 1646 aa50.29■■■■■ 5.64
TNFSF12-202ENST00000322272 ABCC9O60706 1549 aa49.43■■■■■ 5.5
TNFSF12-202ENST00000322272 DCAF8L2P0C7V8 631 aa47.48■■■■■ 5.19
TNFSF12-202ENST00000322272 RB1CC1Q8TDY2 1594 aa47.44■■■■■ 5.18
TNFSF12-202ENST00000322272 NACADO15069 1562 aa47.35■■■■■ 5.17
TNFSF12-202ENST00000322272 ZCCHC6Q5VYS8 1495 aaKnown RBP47.13■■■■■ 5.14
TNFSF12-202ENST00000322272 MYO15BQ96JP2 1530 aa47.01■■■■■ 5.12
TNFSF12-202ENST00000322272 DCAF1Q9Y4B6 1507 aa46.79■■■■■ 5.08
TNFSF12-202ENST00000322272 UNC13AQ9UPW8 1703 aa46.3■■■■■ 5
TNFSF12-202ENST00000322272 PABPN1Q86U42 306 aaKnown RBP eCLIP46.22■■■■■ 4.99
TNFSF12-202ENST00000322272 BICRAQ9NZM4 1560 aa46■■■■■ 4.95
TNFSF12-202ENST00000322272 SCRIBQ14160 1630 aa45.97■■■■■ 4.95
TNFSF12-202ENST00000322272 DNAJC5BQ9UF47 199 aa45.48■■■■■ 4.87
TNFSF12-202ENST00000322272 SHROOM4Q9ULL8 1493 aa45.48■■■■■ 4.87
TNFSF12-202ENST00000322272 EIF4G1Q04637 1599 aaKnown RBP44.82■■■■■ 4.77
TNFSF12-202ENST00000322272 CC2D2AQ9P2K1 1620 aa44.66■■■■■ 4.74
TNFSF12-202ENST00000322272 CECR2Q9BXF3 1484 aa44.41■■■■■ 4.7
TNFSF12-202ENST00000322272 SMARCA4P51532 1647 aa43.92■■■■■ 4.62
TNFSF12-202ENST00000322272 BAZ1AQ9NRL2 1556 aaPredicted RBP43.88■■■■■ 4.61
TNFSF12-202ENST00000322272 ATAD2BQ9ULI0 1458 aa43.75■■■■■ 4.59
TNFSF12-202ENST00000322272 NCAPD3P42695 1498 aa43.73■■■■■ 4.59
TNFSF12-202ENST00000322272 SMARCA2P51531 1590 aa43.65■■■■■ 4.58
TNFSF12-202ENST00000322272 MROH2BQ7Z745 1585 aa43.65■■■■■ 4.58
TNFSF12-202ENST00000322272 PEG3Q9GZU2 1588 aa43.48■■■■■ 4.55
TNFSF12-202ENST00000322272 HMGXB3Q12766 1538 aa43.47■■■■■ 4.55
TNFSF12-202ENST00000322272 BAZ1BQ9UIG0 1483 aaKnown RBP43.39■■■■■ 4.54
TNFSF12-202ENST00000322272 WIZO95785 1651 aa43.16■■■■■ 4.5
TNFSF12-202ENST00000322272 RSF1Q96T23 1441 aaPredicted RBP43.13■■■■■ 4.49
TNFSF12-202ENST00000322272 NESP48681 1621 aa42.74■■■■■ 4.43
TNFSF12-202ENST00000322272 TOP2AP11388 1531 aaKnown RBP42.68■■■■■ 4.42
TNFSF12-202ENST00000322272 ERCC6Q03468 1493 aa42.61■■■■■ 4.41
TNFSF12-202ENST00000322272 LAMC3Q9Y6N6 1575 aa42.56■■■■■ 4.4
TNFSF12-202ENST00000322272 CADPSQ9ULU8 1353 aa42.47■■■■■ 4.39
TNFSF12-202ENST00000322272 PDS5BQ9NTI5 1447 aa42.33■■■■■ 4.37
TNFSF12-202ENST00000322272 CCDC88BA6NC98 1476 aa42.22■■■■■ 4.35
TNFSF12-202ENST00000322272 CFTRP13569 1480 aa42.19■■■■■ 4.34
TNFSF12-202ENST00000322272 KIF21AQ7Z4S6 1674 aa42.16■■■■■ 4.34
TNFSF12-202ENST00000322272 CUX2O14529 1486 aa42.14■■■■■ 4.34
TNFSF12-202ENST00000322272 SUPT5HO00267 1087 aaKnown RBP42.06■■■■■ 4.32
TNFSF12-202ENST00000322272 THOC2Q8NI27 1593 aaKnown RBP42.05■■■■■ 4.32
TNFSF12-202ENST00000322272 FANCD2Q9BXW9 1451 aa41.98■■■■■ 4.31
TNFSF12-202ENST00000322272 CEP164Q9UPV0 1460 aa41.93■■■■■ 4.3
TNFSF12-202ENST00000322272 MRC2Q9UBG0 1479 aa41.88■■■■■ 4.29
TNFSF12-202ENST00000322272 PRDM2Q13029 1718 aa41.74■■■■■ 4.27
TNFSF12-202ENST00000322272 WDR62O43379 1518 aa41.72■■■■■ 4.27
TNFSF12-202ENST00000322272 URB2Q14146 1524 aaKnown RBP41.56■■■■■ 4.24
TNFSF12-202ENST00000322272 TOPBP1Q92547 1522 aa41.29■■■■■ 4.2
TNFSF12-202ENST00000322272 ABCC8Q09428 1581 aa41.25■■■■■ 4.19
TNFSF12-202ENST00000322272 DNMBPQ6XZF7 1577 aa41.21■■■■■ 4.19
TNFSF12-202ENST00000322272 IFT140Q96RY7 1462 aa41.05■■■■■ 4.16
TNFSF12-202ENST00000322272 DNAJC5Q9H3Z4 198 aa41.01■■■■■ 4.16
TNFSF12-202ENST00000322272 CUX1P39880 1505 aa40.95■■■■■ 4.15
TNFSF12-202ENST00000322272 POLA1P09884 1462 aaPredicted RBP40.94■■■■■ 4.14
TNFSF12-202ENST00000322272 ZNF608Q9ULD9 1512 aaPredicted RBP40.91■■■■■ 4.14
TNFSF12-202ENST00000322272 FGD5Q6ZNL6 1462 aa40.84■■■■■ 4.13
TNFSF12-202ENST00000322272 TARBP1Q13395 1621 aaKnown RBP40.81■■■■■ 4.12
TNFSF12-202ENST00000322272 RAD54L2Q9Y4B4 1467 aa40.8■■■■■ 4.12
TNFSF12-202ENST00000322272 SOGA1O94964 1423 aa40.79■■■■■ 4.12
TNFSF12-202ENST00000322272 EIF4G3O43432 1585 aaKnown RBP40.7■■■■■ 4.11
TNFSF12-202ENST00000322272 AQRO60306 1485 aaKnown RBP eCLIP40.68■■■■■ 4.1
TNFSF12-202ENST00000322272 WRNQ14191 1432 aaPredicted RBP eCLIP40.68■■■■■ 4.1
TNFSF12-202ENST00000322272 TDRD9Q8NDG6 1382 aaKnown RBP40.6■■■■■ 4.09
TNFSF12-202ENST00000322272 SYNJ1O43426 1573 aa40.55■■■■■ 4.08
TNFSF12-202ENST00000322272 TOP2BQ02880 1626 aa40.54■■■■■ 4.08
TNFSF12-202ENST00000322272 BIVM-ERCC5R4GMW8 1640 aa40.51■■■■■ 4.08
TNFSF12-202ENST00000322272 OSCARQ8IYS5 282 aa40.45■■■■■ 4.07
TNFSF12-202ENST00000322272 WDR97A6NE52 1622 aa40.44■■■■■ 4.06
TNFSF12-202ENST00000322272 ABCA10Q8WWZ4 1543 aa40.42■■■■■ 4.06
TNFSF12-202ENST00000322272 GRIN2BQ13224 1484 aa40.3■■■■■ 4.04
TNFSF12-202ENST00000322272 GAPVD1Q14C86 1478 aa40.3■■■■■ 4.04
TNFSF12-202ENST00000322272 SNAPC4Q5SXM2 1469 aa40.27■■■■■ 4.04
TNFSF12-202ENST00000322272 FBLN2P98095 1184 aa40.27■■■■■ 4.04
TNFSF12-202ENST00000322272 ABCA5Q8WWZ7 1642 aa40.23■■■■■ 4.03
TNFSF12-202ENST00000322272 MAGI1Q96QZ7 1491 aaPredicted RBP40.19■■■■■ 4.02
TNFSF12-202ENST00000322272 CHD1O14646 1710 aa40.17■■■■■ 4.02
TNFSF12-202ENST00000322272 PBRM1Q86U86 1689 aa40.15■■■■■ 4.02
TNFSF12-202ENST00000322272 CHMP7Q8WUX9 453 aaPredicted RBP40.11■■■■■ 4.01
TNFSF12-202ENST00000322272 SYNJ2O15056 1496 aa40.05■■■■■ 4
TNFSF12-202ENST00000322272 CHIC1Q5VXU3 224 aa39.96■■■■□ 3.99
TNFSF12-202ENST00000322272 ERICH3Q5RHP9 1530 aa39.92■■■■□ 3.98
TNFSF12-202ENST00000322272 ADAMTS12P58397 1594 aa39.87■■■■□ 3.97
TNFSF12-202ENST00000322272 FHAD1B1AJZ9 1412 aa39.83■■■■□ 3.97
TNFSF12-202ENST00000322272 KIF27Q86VH2 1401 aa39.83■■■■□ 3.97
TNFSF12-202ENST00000322272 GRIN2AQ12879 1464 aa39.78■■■■□ 3.96
TNFSF12-202ENST00000322272 ARHGEF11O15085 1522 aa39.75■■■■□ 3.95
TNFSF12-202ENST00000322272 CLASP1Q7Z460 1538 aa39.75■■■■□ 3.95
TNFSF12-202ENST00000322272 RIMBP3CA6NJZ7 1639 aa39.74■■■■□ 3.95
TNFSF12-202ENST00000322272 RIMBP3BA6NNM3 1639 aa39.74■■■■□ 3.95
TNFSF12-202ENST00000322272 RIMBP3Q9UFD9 1639 aa39.74■■■■□ 3.95
TNFSF12-202ENST00000322272 TRIM41Q8WV44 630 aa39.7■■■■□ 3.95
TNFSF12-202ENST00000322272 IGF1RP08069 1367 aa39.69■■■■□ 3.94
TNFSF12-202ENST00000322272 NUP160Q12769 1436 aa39.6■■■■□ 3.93
TNFSF12-202ENST00000322272 CEP170Q5SW79 1584 aa39.58■■■■□ 3.93
TNFSF12-202ENST00000322272 CUL7Q14999 1698 aa39.51■■■■□ 3.92
TNFSF12-202ENST00000322272 CYB5RLQ6IPT4 315 aa39.46■■■■□ 3.91
TNFSF12-202ENST00000322272 RUSC2Q8N2Y8 1516 aa39.46■■■■□ 3.91
TNFSF12-202ENST00000322272 CARMIL1Q5VZK9 1371 aa39.45■■■■□ 3.91
TNFSF12-202ENST00000322272 ARAP1Q96P48 1450 aa39.43■■■■□ 3.9
TNFSF12-202ENST00000322272 SHROOM2Q13796 1616 aa39.27■■■■□ 3.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms