RNA–Protein interactions for RNA: ENST00000321535.4

FBXO39-201, Transcript of F-box protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO39, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO39-201ENST00000321535 NISCHQ9Y2I1 1504 aa29.48■■■□□ 2.31
FBXO39-201ENST00000321535 ABCC9O60706 1549 aa26.72■■□□□ 1.87
FBXO39-201ENST00000321535 CCDC180Q9P1Z9 1646 aa26.56■■□□□ 1.84
FBXO39-201ENST00000321535 RB1CC1Q8TDY2 1594 aa25.41■■□□□ 1.66
FBXO39-201ENST00000321535 DNAJC5BQ9UF47 199 aa25.27■■□□□ 1.64
FBXO39-201ENST00000321535 NACADO15069 1562 aa25.21■■□□□ 1.63
FBXO39-201ENST00000321535 DCAF8L2P0C7V8 631 aa24.92■■□□□ 1.58
FBXO39-201ENST00000321535 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
FBXO39-201ENST00000321535 PABPN1Q86U42 306 aaKnown RBP eCLIP24.83■■□□□ 1.57
FBXO39-201ENST00000321535 UNC13AQ9UPW8 1703 aa24.68■■□□□ 1.54
FBXO39-201ENST00000321535 BICRAQ9NZM4 1560 aa24.62■■□□□ 1.53
FBXO39-201ENST00000321535 SHROOM4Q9ULL8 1493 aa24.44■■□□□ 1.5
FBXO39-201ENST00000321535 DCAF1Q9Y4B6 1507 aa24.42■■□□□ 1.5
FBXO39-201ENST00000321535 ZCCHC6Q5VYS8 1495 aaKnown RBP24.38■■□□□ 1.49
FBXO39-201ENST00000321535 CECR2Q9BXF3 1484 aa24.15■■□□□ 1.46
FBXO39-201ENST00000321535 CC2D2AQ9P2K1 1620 aa24.13■■□□□ 1.45
FBXO39-201ENST00000321535 SCRIBQ14160 1630 aa24.08■■□□□ 1.45
FBXO39-201ENST00000321535 EIF4G1Q04637 1599 aaKnown RBP24.06■■□□□ 1.44
FBXO39-201ENST00000321535 DNAJC5Q9H3Z4 198 aa23.48■■□□□ 1.35
FBXO39-201ENST00000321535 NCAPD3P42695 1498 aa23.29■■□□□ 1.32
FBXO39-201ENST00000321535 CUX2O14529 1486 aa23.25■■□□□ 1.31
FBXO39-201ENST00000321535 ERCC6Q03468 1493 aa23.13■■□□□ 1.29
FBXO39-201ENST00000321535 ATAD2BQ9ULI0 1458 aa23.13■■□□□ 1.29
FBXO39-201ENST00000321535 SMARCA2P51531 1590 aa23.09■■□□□ 1.29
FBXO39-201ENST00000321535 HMGXB3Q12766 1538 aa23.07■■□□□ 1.28
FBXO39-201ENST00000321535 SMARCA4P51532 1647 aa23.01■■□□□ 1.27
FBXO39-201ENST00000321535 BAZ1AQ9NRL2 1556 aaPredicted RBP22.92■■□□□ 1.26
FBXO39-201ENST00000321535 BAZ1BQ9UIG0 1483 aaKnown RBP22.89■■□□□ 1.26
FBXO39-201ENST00000321535 PEG3Q9GZU2 1588 aa22.86■■□□□ 1.25
FBXO39-201ENST00000321535 NESP48681 1621 aa22.86■■□□□ 1.25
FBXO39-201ENST00000321535 LAMC3Q9Y6N6 1575 aa22.77■■□□□ 1.24
FBXO39-201ENST00000321535 THOC2Q8NI27 1593 aaKnown RBP22.71■■□□□ 1.23
FBXO39-201ENST00000321535 PDS5BQ9NTI5 1447 aa22.69■■□□□ 1.22
FBXO39-201ENST00000321535 MROH2BQ7Z745 1585 aa22.66■■□□□ 1.22
FBXO39-201ENST00000321535 CADPSQ9ULU8 1353 aa22.56■■□□□ 1.2
FBXO39-201ENST00000321535 KIF21AQ7Z4S6 1674 aa22.53■■□□□ 1.2
FBXO39-201ENST00000321535 MRC2Q9UBG0 1479 aa22.45■■□□□ 1.18
FBXO39-201ENST00000321535 WDR62O43379 1518 aa22.4■■□□□ 1.18
FBXO39-201ENST00000321535 WIZO95785 1651 aa22.33■■□□□ 1.17
FBXO39-201ENST00000321535 CEP164Q9UPV0 1460 aa22.31■■□□□ 1.16
FBXO39-201ENST00000321535 FANCD2Q9BXW9 1451 aa22.26■■□□□ 1.15
FBXO39-201ENST00000321535 TRIM41Q8WV44 630 aa22.26■■□□□ 1.15
FBXO39-201ENST00000321535 CFTRP13569 1480 aa22.25■■□□□ 1.15
FBXO39-201ENST00000321535 RSF1Q96T23 1441 aaPredicted RBP22.15■■□□□ 1.14
FBXO39-201ENST00000321535 OSCARQ8IYS5 282 aa22.14■■□□□ 1.14
FBXO39-201ENST00000321535 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
FBXO39-201ENST00000321535 URB2Q14146 1524 aaKnown RBP22.06■■□□□ 1.12
FBXO39-201ENST00000321535 IFT140Q96RY7 1462 aa21.91■■□□□ 1.1
FBXO39-201ENST00000321535 PRDM2Q13029 1718 aa21.9■■□□□ 1.1
FBXO39-201ENST00000321535 CCDC88BA6NC98 1476 aa21.86■■□□□ 1.09
FBXO39-201ENST00000321535 ABCC8Q09428 1581 aa21.84■■□□□ 1.09
FBXO39-201ENST00000321535 TOPBP1Q92547 1522 aa21.8■■□□□ 1.08
FBXO39-201ENST00000321535 ZNF608Q9ULD9 1512 aaPredicted RBP21.8■■□□□ 1.08
FBXO39-201ENST00000321535 RIMBP3CA6NJZ7 1639 aa21.77■■□□□ 1.08
FBXO39-201ENST00000321535 RIMBP3BA6NNM3 1639 aa21.77■■□□□ 1.08
FBXO39-201ENST00000321535 RIMBP3Q9UFD9 1639 aa21.77■■□□□ 1.08
FBXO39-201ENST00000321535 ARHGEF11O15085 1522 aa21.71■■□□□ 1.07
FBXO39-201ENST00000321535 DNMBPQ6XZF7 1577 aa21.71■■□□□ 1.07
FBXO39-201ENST00000321535 EIF4G3O43432 1585 aaKnown RBP21.67■■□□□ 1.06
FBXO39-201ENST00000321535 TARBP1Q13395 1621 aaKnown RBP21.61■■□□□ 1.05
FBXO39-201ENST00000321535 AQRO60306 1485 aaKnown RBP eCLIP21.6■■□□□ 1.05
FBXO39-201ENST00000321535 CYB5RLQ6IPT4 315 aa21.57■■□□□ 1.04
FBXO39-201ENST00000321535 POLA1P09884 1462 aaPredicted RBP21.56■■□□□ 1.04
FBXO39-201ENST00000321535 FBLN2P98095 1184 aa21.5■■□□□ 1.03
FBXO39-201ENST00000321535 CHD1O14646 1710 aa21.5■■□□□ 1.03
FBXO39-201ENST00000321535 SOGA1O94964 1423 aa21.49■■□□□ 1.03
FBXO39-201ENST00000321535 WDR97A6NE52 1622 aa21.48■■□□□ 1.03
FBXO39-201ENST00000321535 ARAP1Q96P48 1450 aa21.47■■□□□ 1.03
FBXO39-201ENST00000321535 RAD54L2Q9Y4B4 1467 aa21.44■■□□□ 1.02
FBXO39-201ENST00000321535 TDRD9Q8NDG6 1382 aaKnown RBP21.43■■□□□ 1.02
FBXO39-201ENST00000321535 TRHP20396 242 aaPredicted RBP21.4■■□□□ 1.02
FBXO39-201ENST00000321535 FGD5Q6ZNL6 1462 aa21.38■■□□□ 1.01
FBXO39-201ENST00000321535 MAGI1Q96QZ7 1491 aaPredicted RBP21.38■■□□□ 1.01
FBXO39-201ENST00000321535 CHMP7Q8WUX9 453 aaPredicted RBP21.37■■□□□ 1.01
FBXO39-201ENST00000321535 SNAPC4Q5SXM2 1469 aa21.37■■□□□ 1.01
FBXO39-201ENST00000321535 CLASP1Q7Z460 1538 aa21.35■■□□□ 1.01
FBXO39-201ENST00000321535 GRIN2BQ13224 1484 aa21.34■■□□□ 1.01
FBXO39-201ENST00000321535 SYNJ1O43426 1573 aa21.33■■□□□ 1.01
FBXO39-201ENST00000321535 CUX1P39880 1505 aa21.31■■□□□ 1
FBXO39-201ENST00000321535 SYNJ2O15056 1496 aa21.3■■□□□ 1
FBXO39-201ENST00000321535 GAPVD1Q14C86 1478 aa21.22■□□□□ 0.99
FBXO39-201ENST00000321535 ABCA10Q8WWZ4 1543 aa21.17■□□□□ 0.98
FBXO39-201ENST00000321535 PBRM1Q86U86 1689 aa21.13■□□□□ 0.97
FBXO39-201ENST00000321535 ABCA5Q8WWZ7 1642 aa21.11■□□□□ 0.97
FBXO39-201ENST00000321535 WRNQ14191 1432 aaPredicted RBP eCLIP21.07■□□□□ 0.96
FBXO39-201ENST00000321535 GRIN2AQ12879 1464 aa21.04■□□□□ 0.96
FBXO39-201ENST00000321535 NUP160Q12769 1436 aa21■□□□□ 0.95
FBXO39-201ENST00000321535 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
FBXO39-201ENST00000321535 FHAD1B1AJZ9 1412 aa20.97■□□□□ 0.95
FBXO39-201ENST00000321535 ADAMTS12P58397 1594 aa20.96■□□□□ 0.95
FBXO39-201ENST00000321535 TOP2BQ02880 1626 aa20.93■□□□□ 0.94
FBXO39-201ENST00000321535 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
FBXO39-201ENST00000321535 SUPT5HO00267 1087 aaKnown RBP20.93■□□□□ 0.94
FBXO39-201ENST00000321535 BIVM-ERCC5R4GMW8 1640 aa20.92■□□□□ 0.94
FBXO39-201ENST00000321535 ERICH3Q5RHP9 1530 aa20.91■□□□□ 0.94
FBXO39-201ENST00000321535 ERCC6L2Q5T890 1561 aa20.91■□□□□ 0.94
FBXO39-201ENST00000321535 SHROOM2Q13796 1616 aa20.9■□□□□ 0.94
FBXO39-201ENST00000321535 JPH4Q96JJ6 628 aa20.8■□□□□ 0.92
FBXO39-201ENST00000321535 PRG4Q92954 1404 aaPredicted RBP20.79■□□□□ 0.92
FBXO39-201ENST00000321535 NPM1P06748 294 aaKnown RBP eCLIP20.7■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms