RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 NISCHQ9Y2I1 1504 aa24.51■■□□□ 1.51
CCDC65-202ENST00000320516 CCDC180Q9P1Z9 1646 aa21.84■■□□□ 1.09
CCDC65-202ENST00000320516 ABCC9O60706 1549 aa21.52■■□□□ 1.04
CCDC65-202ENST00000320516 RB1CC1Q8TDY2 1594 aa20.63■□□□□ 0.89
CCDC65-202ENST00000320516 NACADO15069 1562 aa20.58■□□□□ 0.88
CCDC65-202ENST00000320516 DCAF8L2P0C7V8 631 aa20.48■□□□□ 0.87
CCDC65-202ENST00000320516 MYO15BQ96JP2 1530 aa20.44■□□□□ 0.86
CCDC65-202ENST00000320516 ZCCHC6Q5VYS8 1495 aaKnown RBP20.38■□□□□ 0.85
CCDC65-202ENST00000320516 DCAF1Q9Y4B6 1507 aa20.28■□□□□ 0.84
CCDC65-202ENST00000320516 UNC13AQ9UPW8 1703 aa20.16■□□□□ 0.82
CCDC65-202ENST00000320516 PABPN1Q86U42 306 aaKnown RBP eCLIP20.08■□□□□ 0.81
CCDC65-202ENST00000320516 BICRAQ9NZM4 1560 aa20.05■□□□□ 0.8
CCDC65-202ENST00000320516 DNAJC5BQ9UF47 199 aa19.95■□□□□ 0.78
CCDC65-202ENST00000320516 SCRIBQ14160 1630 aa19.9■□□□□ 0.78
CCDC65-202ENST00000320516 SHROOM4Q9ULL8 1493 aa19.81■□□□□ 0.76
CCDC65-202ENST00000320516 EIF4G1Q04637 1599 aaKnown RBP19.51■□□□□ 0.71
CCDC65-202ENST00000320516 CC2D2AQ9P2K1 1620 aa19.47■□□□□ 0.71
CCDC65-202ENST00000320516 CECR2Q9BXF3 1484 aa19.36■□□□□ 0.69
CCDC65-202ENST00000320516 SMARCA4P51532 1647 aa19.04■□□□□ 0.64
CCDC65-202ENST00000320516 NCAPD3P42695 1498 aa19.01■□□□□ 0.63
CCDC65-202ENST00000320516 ATAD2BQ9ULI0 1458 aa18.99■□□□□ 0.63
CCDC65-202ENST00000320516 BAZ1AQ9NRL2 1556 aaPredicted RBP18.99■□□□□ 0.63
CCDC65-202ENST00000320516 SMARCA2P51531 1590 aa18.94■□□□□ 0.62
CCDC65-202ENST00000320516 HMGXB3Q12766 1538 aa18.89■□□□□ 0.61
CCDC65-202ENST00000320516 MROH2BQ7Z745 1585 aa18.89■□□□□ 0.61
CCDC65-202ENST00000320516 PEG3Q9GZU2 1588 aa18.88■□□□□ 0.61
CCDC65-202ENST00000320516 BAZ1BQ9UIG0 1483 aaKnown RBP18.8■□□□□ 0.6
CCDC65-202ENST00000320516 WIZO95785 1651 aa18.66■□□□□ 0.58
CCDC65-202ENST00000320516 RSF1Q96T23 1441 aaPredicted RBP18.62■□□□□ 0.57
CCDC65-202ENST00000320516 NESP48681 1621 aa18.59■□□□□ 0.57
CCDC65-202ENST00000320516 ERCC6Q03468 1493 aa18.53■□□□□ 0.56
CCDC65-202ENST00000320516 LAMC3Q9Y6N6 1575 aa18.51■□□□□ 0.55
CCDC65-202ENST00000320516 TOP2AP11388 1531 aaKnown RBP18.45■□□□□ 0.54
CCDC65-202ENST00000320516 CADPSQ9ULU8 1353 aa18.44■□□□□ 0.54
CCDC65-202ENST00000320516 CUX2O14529 1486 aa18.43■□□□□ 0.54
CCDC65-202ENST00000320516 PDS5BQ9NTI5 1447 aa18.39■□□□□ 0.53
CCDC65-202ENST00000320516 THOC2Q8NI27 1593 aaKnown RBP18.35■□□□□ 0.53
CCDC65-202ENST00000320516 KIF21AQ7Z4S6 1674 aa18.34■□□□□ 0.53
CCDC65-202ENST00000320516 CFTRP13569 1480 aa18.3■□□□□ 0.52
CCDC65-202ENST00000320516 CCDC88BA6NC98 1476 aa18.25■□□□□ 0.51
CCDC65-202ENST00000320516 FANCD2Q9BXW9 1451 aa18.21■□□□□ 0.51
CCDC65-202ENST00000320516 MRC2Q9UBG0 1479 aa18.21■□□□□ 0.51
CCDC65-202ENST00000320516 CEP164Q9UPV0 1460 aa18.19■□□□□ 0.5
CCDC65-202ENST00000320516 WDR62O43379 1518 aa18.18■□□□□ 0.5
CCDC65-202ENST00000320516 PRDM2Q13029 1718 aa18.1■□□□□ 0.49
CCDC65-202ENST00000320516 DNAJC5Q9H3Z4 198 aa18.07■□□□□ 0.48
CCDC65-202ENST00000320516 URB2Q14146 1524 aaKnown RBP18.06■□□□□ 0.48
CCDC65-202ENST00000320516 SUPT5HO00267 1087 aaKnown RBP17.96■□□□□ 0.47
CCDC65-202ENST00000320516 TOPBP1Q92547 1522 aa17.91■□□□□ 0.46
CCDC65-202ENST00000320516 ABCC8Q09428 1581 aa17.89■□□□□ 0.45
CCDC65-202ENST00000320516 DNMBPQ6XZF7 1577 aa17.87■□□□□ 0.45
CCDC65-202ENST00000320516 IFT140Q96RY7 1462 aa17.83■□□□□ 0.45
CCDC65-202ENST00000320516 AEBP2Q6ZN18 517 aaPredicted RBP17.82■□□□□ 0.44
CCDC65-202ENST00000320516 ZNF608Q9ULD9 1512 aaPredicted RBP17.78■□□□□ 0.44
CCDC65-202ENST00000320516 POLA1P09884 1462 aaPredicted RBP17.75■□□□□ 0.43
CCDC65-202ENST00000320516 TARBP1Q13395 1621 aaKnown RBP17.74■□□□□ 0.43
CCDC65-202ENST00000320516 CUX1P39880 1505 aa17.72■□□□□ 0.43
CCDC65-202ENST00000320516 EIF4G3O43432 1585 aaKnown RBP17.68■□□□□ 0.42
CCDC65-202ENST00000320516 FGD5Q6ZNL6 1462 aa17.68■□□□□ 0.42
CCDC65-202ENST00000320516 RAD54L2Q9Y4B4 1467 aa17.68■□□□□ 0.42
CCDC65-202ENST00000320516 SOGA1O94964 1423 aa17.66■□□□□ 0.42
CCDC65-202ENST00000320516 AQRO60306 1485 aaKnown RBP eCLIP17.65■□□□□ 0.42
CCDC65-202ENST00000320516 OSCARQ8IYS5 282 aa17.63■□□□□ 0.41
CCDC65-202ENST00000320516 TDRD9Q8NDG6 1382 aaKnown RBP17.59■□□□□ 0.41
CCDC65-202ENST00000320516 WDR97A6NE52 1622 aa17.57■□□□□ 0.4
CCDC65-202ENST00000320516 WRNQ14191 1432 aaPredicted RBP eCLIP17.54■□□□□ 0.4
CCDC65-202ENST00000320516 TOP2BQ02880 1626 aa17.52■□□□□ 0.39
CCDC65-202ENST00000320516 BIVM-ERCC5R4GMW8 1640 aa17.52■□□□□ 0.39
CCDC65-202ENST00000320516 ABCA10Q8WWZ4 1543 aa17.51■□□□□ 0.39
CCDC65-202ENST00000320516 SYNJ1O43426 1573 aa17.51■□□□□ 0.39
CCDC65-202ENST00000320516 GRIN2BQ13224 1484 aa17.48■□□□□ 0.39
CCDC65-202ENST00000320516 CHD1O14646 1710 aa17.48■□□□□ 0.39
CCDC65-202ENST00000320516 SNAPC4Q5SXM2 1469 aa17.47■□□□□ 0.39
CCDC65-202ENST00000320516 GAPVD1Q14C86 1478 aa17.46■□□□□ 0.39
CCDC65-202ENST00000320516 MAGI1Q96QZ7 1491 aaPredicted RBP17.45■□□□□ 0.38
CCDC65-202ENST00000320516 ABCA5Q8WWZ7 1642 aa17.45■□□□□ 0.38
CCDC65-202ENST00000320516 FBLN2P98095 1184 aa17.43■□□□□ 0.38
CCDC65-202ENST00000320516 PBRM1Q86U86 1689 aa17.41■□□□□ 0.38
CCDC65-202ENST00000320516 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
CCDC65-202ENST00000320516 CHMP7Q8WUX9 453 aaPredicted RBP17.37■□□□□ 0.37
CCDC65-202ENST00000320516 RIMBP3CA6NJZ7 1639 aa17.36■□□□□ 0.37
CCDC65-202ENST00000320516 RIMBP3BA6NNM3 1639 aa17.36■□□□□ 0.37
CCDC65-202ENST00000320516 RIMBP3Q9UFD9 1639 aa17.36■□□□□ 0.37
CCDC65-202ENST00000320516 ARHGEF11O15085 1522 aa17.36■□□□□ 0.37
CCDC65-202ENST00000320516 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
CCDC65-202ENST00000320516 CLASP1Q7Z460 1538 aa17.32■□□□□ 0.36
CCDC65-202ENST00000320516 ERICH3Q5RHP9 1530 aa17.29■□□□□ 0.36
CCDC65-202ENST00000320516 ADAMTS12P58397 1594 aa17.29■□□□□ 0.36
CCDC65-202ENST00000320516 FHAD1B1AJZ9 1412 aa17.26■□□□□ 0.35
CCDC65-202ENST00000320516 GRIN2AQ12879 1464 aa17.26■□□□□ 0.35
CCDC65-202ENST00000320516 ARAP1Q96P48 1450 aa17.21■□□□□ 0.35
CCDC65-202ENST00000320516 NUP160Q12769 1436 aa17.21■□□□□ 0.35
CCDC65-202ENST00000320516 CYB5RLQ6IPT4 315 aa17.19■□□□□ 0.34
CCDC65-202ENST00000320516 CEP170Q5SW79 1584 aa17.18■□□□□ 0.34
CCDC65-202ENST00000320516 KIF27Q86VH2 1401 aa17.18■□□□□ 0.34
CCDC65-202ENST00000320516 IGF1RP08069 1367 aa17.16■□□□□ 0.34
CCDC65-202ENST00000320516 CHIC1Q5VXU3 224 aa17.12■□□□□ 0.33
CCDC65-202ENST00000320516 SHROOM2Q13796 1616 aa17.09■□□□□ 0.33
CCDC65-202ENST00000320516 CUL7Q14999 1698 aa17.08■□□□□ 0.32
CCDC65-202ENST00000320516 ERCC6L2Q5T890 1561 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms