RNA–Protein interactions for RNA: ENST00000320161.10

SGIP1-202, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 680 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-202ENST00000320161 NISCHQ9Y2I1 1504 aa20.92■□□□□ 0.94
SGIP1-202ENST00000320161 AEBP2Q6ZN18 517 aaPredicted RBP19.41■□□□□ 0.7
SGIP1-202ENST00000320161 ABCC9O60706 1549 aa18.93■□□□□ 0.62
SGIP1-202ENST00000320161 CCDC180Q9P1Z9 1646 aa18.92■□□□□ 0.62
SGIP1-202ENST00000320161 CHIC1Q5VXU3 224 aa18.21■□□□□ 0.51
SGIP1-202ENST00000320161 RB1CC1Q8TDY2 1594 aa18.04■□□□□ 0.48
SGIP1-202ENST00000320161 NACADO15069 1562 aa17.87■□□□□ 0.45
SGIP1-202ENST00000320161 DCAF8L2P0C7V8 631 aa17.79■□□□□ 0.44
SGIP1-202ENST00000320161 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
SGIP1-202ENST00000320161 UNC13AQ9UPW8 1703 aa17.64■□□□□ 0.41
SGIP1-202ENST00000320161 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
SGIP1-202ENST00000320161 MYO15BQ96JP2 1530 aa17.55■□□□□ 0.4
SGIP1-202ENST00000320161 BICRAQ9NZM4 1560 aa17.4■□□□□ 0.38
SGIP1-202ENST00000320161 ZCCHC6Q5VYS8 1495 aaKnown RBP17.3■□□□□ 0.36
SGIP1-202ENST00000320161 DCAF1Q9Y4B6 1507 aa17.28■□□□□ 0.36
SGIP1-202ENST00000320161 SHROOM4Q9ULL8 1493 aa17.25■□□□□ 0.35
SGIP1-202ENST00000320161 SCRIBQ14160 1630 aa17.19■□□□□ 0.34
SGIP1-202ENST00000320161 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
SGIP1-202ENST00000320161 CECR2Q9BXF3 1484 aa17.07■□□□□ 0.32
SGIP1-202ENST00000320161 EIF4G1Q04637 1599 aaKnown RBP17.04■□□□□ 0.32
SGIP1-202ENST00000320161 SENP3Q9H4L4 574 aaPredicted RBP16.78■□□□□ 0.28
SGIP1-202ENST00000320161 POTEDQ86YR6 584 aa16.73■□□□□ 0.27
SGIP1-202ENST00000320161 ERCC6Q03468 1493 aa16.44■□□□□ 0.22
SGIP1-202ENST00000320161 DNAJC5Q9H3Z4 198 aa16.43■□□□□ 0.22
SGIP1-202ENST00000320161 NCAPD3P42695 1498 aa16.42■□□□□ 0.22
SGIP1-202ENST00000320161 SMARCA2P51531 1590 aa16.41■□□□□ 0.22
SGIP1-202ENST00000320161 CUX2O14529 1486 aa16.39■□□□□ 0.21
SGIP1-202ENST00000320161 SMARCA4P51532 1647 aa16.37■□□□□ 0.21
SGIP1-202ENST00000320161 PHF23Q9BUL5 403 aaPredicted RBP16.36■□□□□ 0.21
SGIP1-202ENST00000320161 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
SGIP1-202ENST00000320161 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
SGIP1-202ENST00000320161 BAZ1AQ9NRL2 1556 aaPredicted RBP16.3■□□□□ 0.2
SGIP1-202ENST00000320161 BAZ1BQ9UIG0 1483 aaKnown RBP16.28■□□□□ 0.2
SGIP1-202ENST00000320161 NESP48681 1621 aa16.19■□□□□ 0.18
SGIP1-202ENST00000320161 PEG3Q9GZU2 1588 aa16.18■□□□□ 0.18
SGIP1-202ENST00000320161 LAMC3Q9Y6N6 1575 aa16.17■□□□□ 0.18
SGIP1-202ENST00000320161 KIF21AQ7Z4S6 1674 aa16.09■□□□□ 0.17
SGIP1-202ENST00000320161 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
SGIP1-202ENST00000320161 THOC2Q8NI27 1593 aaKnown RBP16.09■□□□□ 0.17
SGIP1-202ENST00000320161 PDS5BQ9NTI5 1447 aa16.06■□□□□ 0.16
SGIP1-202ENST00000320161 WIZO95785 1651 aa15.95■□□□□ 0.14
SGIP1-202ENST00000320161 CADPSQ9ULU8 1353 aa15.94■□□□□ 0.14
SGIP1-202ENST00000320161 MRC2Q9UBG0 1479 aa15.91■□□□□ 0.14
SGIP1-202ENST00000320161 CEP164Q9UPV0 1460 aa15.85■□□□□ 0.13
SGIP1-202ENST00000320161 WDR62O43379 1518 aa15.85■□□□□ 0.13
SGIP1-202ENST00000320161 FANCD2Q9BXW9 1451 aa15.78■□□□□ 0.12
SGIP1-202ENST00000320161 TRIM41Q8WV44 630 aa15.75■□□□□ 0.11
SGIP1-202ENST00000320161 TOP2AP11388 1531 aaKnown RBP15.74■□□□□ 0.11
SGIP1-202ENST00000320161 FOXD1Q16676 465 aa15.74■□□□□ 0.11
SGIP1-202ENST00000320161 PRDM2Q13029 1718 aa15.74■□□□□ 0.11
SGIP1-202ENST00000320161 CFTRP13569 1480 aa15.72■□□□□ 0.11
SGIP1-202ENST00000320161 RSF1Q96T23 1441 aaPredicted RBP15.7■□□□□ 0.1
SGIP1-202ENST00000320161 OSCARQ8IYS5 282 aa15.64■□□□□ 0.09
SGIP1-202ENST00000320161 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
SGIP1-202ENST00000320161 CCDC88BA6NC98 1476 aa15.52■□□□□ 0.07
SGIP1-202ENST00000320161 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
SGIP1-202ENST00000320161 ABCC8Q09428 1581 aa15.5■□□□□ 0.07
SGIP1-202ENST00000320161 TOPBP1Q92547 1522 aa15.47■□□□□ 0.07
SGIP1-202ENST00000320161 RIMBP3CA6NJZ7 1639 aa15.44■□□□□ 0.06
SGIP1-202ENST00000320161 RIMBP3BA6NNM3 1639 aa15.44■□□□□ 0.06
SGIP1-202ENST00000320161 RIMBP3Q9UFD9 1639 aa15.44■□□□□ 0.06
SGIP1-202ENST00000320161 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
SGIP1-202ENST00000320161 ZNF608Q9ULD9 1512 aaPredicted RBP15.43■□□□□ 0.06
SGIP1-202ENST00000320161 EIF4G3O43432 1585 aaKnown RBP15.42■□□□□ 0.06
SGIP1-202ENST00000320161 CHD1O14646 1710 aa15.37■□□□□ 0.05
SGIP1-202ENST00000320161 ARHGEF11O15085 1522 aa15.35■□□□□ 0.05
SGIP1-202ENST00000320161 TARBP1Q13395 1621 aaKnown RBP15.33■□□□□ 0.04
SGIP1-202ENST00000320161 FBLN2P98095 1184 aa15.32■□□□□ 0.04
SGIP1-202ENST00000320161 AQRO60306 1485 aaKnown RBP eCLIP15.3■□□□□ 0.04
SGIP1-202ENST00000320161 POLA1P09884 1462 aaPredicted RBP15.28■□□□□ 0.04
SGIP1-202ENST00000320161 CYB5RLQ6IPT4 315 aa15.26■□□□□ 0.03
SGIP1-202ENST00000320161 WDR97A6NE52 1622 aa15.25■□□□□ 0.03
SGIP1-202ENST00000320161 SOGA1O94964 1423 aa15.25■□□□□ 0.03
SGIP1-202ENST00000320161 RAD54L2Q9Y4B4 1467 aa15.21■□□□□ 0.03
SGIP1-202ENST00000320161 MSH5O43196 834 aa15.21■□□□□ 0.03
SGIP1-202ENST00000320161 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
SGIP1-202ENST00000320161 TDRD9Q8NDG6 1382 aaKnown RBP15.2■□□□□ 0.02
SGIP1-202ENST00000320161 FGD5Q6ZNL6 1462 aa15.2■□□□□ 0.02
SGIP1-202ENST00000320161 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
SGIP1-202ENST00000320161 SYNJ1O43426 1573 aa15.18■□□□□ 0.02
SGIP1-202ENST00000320161 SNAPC4Q5SXM2 1469 aa15.17■□□□□ 0.02
SGIP1-202ENST00000320161 ARAP1Q96P48 1450 aa15.16■□□□□ 0.02
SGIP1-202ENST00000320161 MAGI1Q96QZ7 1491 aaPredicted RBP15.16■□□□□ 0.02
SGIP1-202ENST00000320161 PBRM1Q86U86 1689 aa15.14■□□□□ 0.01
SGIP1-202ENST00000320161 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
SGIP1-202ENST00000320161 CUX1P39880 1505 aa15.13■□□□□ 0.01
SGIP1-202ENST00000320161 CLASP1Q7Z460 1538 aa15.1■□□□□ 0.01
SGIP1-202ENST00000320161 SYNJ2O15056 1496 aa15.09■□□□□ 0.01
SGIP1-202ENST00000320161 GAPVD1Q14C86 1478 aa15.07■□□□□ 0
SGIP1-202ENST00000320161 SUPT5HO00267 1087 aaKnown RBP15.02■□□□□ -0
SGIP1-202ENST00000320161 ABCA5Q8WWZ7 1642 aa15.01□□□□□ -0.01
SGIP1-202ENST00000320161 ABCA10Q8WWZ4 1543 aa15.01□□□□□ -0.01
SGIP1-202ENST00000320161 WRNQ14191 1432 aaPredicted RBP eCLIP14.97□□□□□ -0.01
SGIP1-202ENST00000320161 BIVM-ERCC5R4GMW8 1640 aa14.93□□□□□ -0.02
SGIP1-202ENST00000320161 GRIN2AQ12879 1464 aa14.93□□□□□ -0.02
SGIP1-202ENST00000320161 TOP2BQ02880 1626 aa14.92□□□□□ -0.02
SGIP1-202ENST00000320161 ADAMTS12P58397 1594 aa14.91□□□□□ -0.02
SGIP1-202ENST00000320161 FHAD1B1AJZ9 1412 aa14.87□□□□□ -0.03
SGIP1-202ENST00000320161 ERICH3Q5RHP9 1530 aa14.86□□□□□ -0.03
SGIP1-202ENST00000320161 CEP170Q5SW79 1584 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 228.7 ms