RNA–Protein interactions for RNA: ENST00000316398.4

CCDC89-201, Transcript of coiled-coil domain containing 89, humanhuman

APPRIS P1 BASIC

Gene CCDC89, Length 1,412 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89-201ENST00000316398 NISCHQ9Y2I1 1504 aa28.94■■■□□ 2.22
CCDC89-201ENST00000316398 ABCC9O60706 1549 aa26.17■■□□□ 1.78
CCDC89-201ENST00000316398 CCDC180Q9P1Z9 1646 aa25.95■■□□□ 1.75
CCDC89-201ENST00000316398 DNAJC5BQ9UF47 199 aa24.88■■□□□ 1.57
CCDC89-201ENST00000316398 RB1CC1Q8TDY2 1594 aa24.84■■□□□ 1.57
CCDC89-201ENST00000316398 NACADO15069 1562 aa24.68■■□□□ 1.54
CCDC89-201ENST00000316398 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
CCDC89-201ENST00000316398 PABPN1Q86U42 306 aaKnown RBP eCLIP24.43■■□□□ 1.5
CCDC89-201ENST00000316398 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
CCDC89-201ENST00000316398 UNC13AQ9UPW8 1703 aa24.18■■□□□ 1.46
CCDC89-201ENST00000316398 BICRAQ9NZM4 1560 aa24.13■■□□□ 1.45
CCDC89-201ENST00000316398 DCAF1Q9Y4B6 1507 aa23.93■■□□□ 1.42
CCDC89-201ENST00000316398 ZCCHC6Q5VYS8 1495 aaKnown RBP23.89■■□□□ 1.42
CCDC89-201ENST00000316398 SHROOM4Q9ULL8 1493 aa23.83■■□□□ 1.41
CCDC89-201ENST00000316398 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
CCDC89-201ENST00000316398 CC2D2AQ9P2K1 1620 aa23.62■■□□□ 1.37
CCDC89-201ENST00000316398 SCRIBQ14160 1630 aa23.57■■□□□ 1.36
CCDC89-201ENST00000316398 EIF4G1Q04637 1599 aaKnown RBP23.54■■□□□ 1.36
CCDC89-201ENST00000316398 DNAJC5Q9H3Z4 198 aa23.04■■□□□ 1.28
CCDC89-201ENST00000316398 NCAPD3P42695 1498 aa22.86■■□□□ 1.25
CCDC89-201ENST00000316398 ATAD2BQ9ULI0 1458 aa22.69■■□□□ 1.22
CCDC89-201ENST00000316398 CUX2O14529 1486 aa22.68■■□□□ 1.22
CCDC89-201ENST00000316398 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
CCDC89-201ENST00000316398 SMARCA2P51531 1590 aa22.58■■□□□ 1.21
CCDC89-201ENST00000316398 HMGXB3Q12766 1538 aa22.55■■□□□ 1.2
CCDC89-201ENST00000316398 SMARCA4P51532 1647 aa22.54■■□□□ 1.2
CCDC89-201ENST00000316398 BAZ1AQ9NRL2 1556 aaPredicted RBP22.45■■□□□ 1.18
CCDC89-201ENST00000316398 NESP48681 1621 aa22.43■■□□□ 1.18
CCDC89-201ENST00000316398 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
CCDC89-201ENST00000316398 PEG3Q9GZU2 1588 aa22.4■■□□□ 1.18
CCDC89-201ENST00000316398 MROH2BQ7Z745 1585 aa22.27■■□□□ 1.15
CCDC89-201ENST00000316398 LAMC3Q9Y6N6 1575 aa22.27■■□□□ 1.15
CCDC89-201ENST00000316398 PDS5BQ9NTI5 1447 aa22.22■■□□□ 1.15
CCDC89-201ENST00000316398 THOC2Q8NI27 1593 aaKnown RBP22.18■■□□□ 1.14
CCDC89-201ENST00000316398 CADPSQ9ULU8 1353 aa22.14■■□□□ 1.14
CCDC89-201ENST00000316398 KIF21AQ7Z4S6 1674 aa22.05■■□□□ 1.12
CCDC89-201ENST00000316398 MRC2Q9UBG0 1479 aa21.96■■□□□ 1.11
CCDC89-201ENST00000316398 WIZO95785 1651 aa21.93■■□□□ 1.1
CCDC89-201ENST00000316398 WDR62O43379 1518 aa21.9■■□□□ 1.1
CCDC89-201ENST00000316398 CFTRP13569 1480 aa21.83■■□□□ 1.08
CCDC89-201ENST00000316398 CEP164Q9UPV0 1460 aa21.81■■□□□ 1.08
CCDC89-201ENST00000316398 FANCD2Q9BXW9 1451 aa21.8■■□□□ 1.08
CCDC89-201ENST00000316398 RSF1Q96T23 1441 aaPredicted RBP21.8■■□□□ 1.08
CCDC89-201ENST00000316398 TRIM41Q8WV44 630 aa21.8■■□□□ 1.08
CCDC89-201ENST00000316398 OSCARQ8IYS5 282 aa21.76■■□□□ 1.07
CCDC89-201ENST00000316398 TOP2AP11388 1531 aaKnown RBP21.66■■□□□ 1.06
CCDC89-201ENST00000316398 URB2Q14146 1524 aaKnown RBP21.62■■□□□ 1.05
CCDC89-201ENST00000316398 CCDC88BA6NC98 1476 aa21.5■■□□□ 1.03
CCDC89-201ENST00000316398 IFT140Q96RY7 1462 aa21.44■■□□□ 1.02
CCDC89-201ENST00000316398 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
CCDC89-201ENST00000316398 PRDM2Q13029 1718 aa21.39■■□□□ 1.02
CCDC89-201ENST00000316398 ZNF608Q9ULD9 1512 aaPredicted RBP21.39■■□□□ 1.01
CCDC89-201ENST00000316398 TOPBP1Q92547 1522 aa21.36■■□□□ 1.01
CCDC89-201ENST00000316398 RIMBP3CA6NJZ7 1639 aa21.27■■□□□ 1
CCDC89-201ENST00000316398 RIMBP3BA6NNM3 1639 aa21.27■■□□□ 1
CCDC89-201ENST00000316398 RIMBP3Q9UFD9 1639 aa21.27■■□□□ 1
CCDC89-201ENST00000316398 DNMBPQ6XZF7 1577 aa21.24■□□□□ 0.99
CCDC89-201ENST00000316398 AQRO60306 1485 aaKnown RBP eCLIP21.22■□□□□ 0.99
CCDC89-201ENST00000316398 ARHGEF11O15085 1522 aa21.22■□□□□ 0.99
CCDC89-201ENST00000316398 CYB5RLQ6IPT4 315 aa21.21■□□□□ 0.99
CCDC89-201ENST00000316398 TARBP1Q13395 1621 aaKnown RBP21.18■□□□□ 0.98
CCDC89-201ENST00000316398 EIF4G3O43432 1585 aaKnown RBP21.16■□□□□ 0.98
CCDC89-201ENST00000316398 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
CCDC89-201ENST00000316398 FBLN2P98095 1184 aa21.12■□□□□ 0.97
CCDC89-201ENST00000316398 SOGA1O94964 1423 aa21.11■□□□□ 0.97
CCDC89-201ENST00000316398 TDRD9Q8NDG6 1382 aaKnown RBP21.07■□□□□ 0.96
CCDC89-201ENST00000316398 RAD54L2Q9Y4B4 1467 aa21.06■□□□□ 0.96
CCDC89-201ENST00000316398 CHD1O14646 1710 aa21.03■□□□□ 0.96
CCDC89-201ENST00000316398 ARAP1Q96P48 1450 aa21■□□□□ 0.95
CCDC89-201ENST00000316398 CHMP7Q8WUX9 453 aaPredicted RBP20.99■□□□□ 0.95
CCDC89-201ENST00000316398 TRHP20396 242 aaPredicted RBP20.98■□□□□ 0.95
CCDC89-201ENST00000316398 WDR97A6NE52 1622 aa20.96■□□□□ 0.95
CCDC89-201ENST00000316398 FGD5Q6ZNL6 1462 aa20.95■□□□□ 0.94
CCDC89-201ENST00000316398 SNAPC4Q5SXM2 1469 aa20.91■□□□□ 0.94
CCDC89-201ENST00000316398 MAGI1Q96QZ7 1491 aaPredicted RBP20.91■□□□□ 0.94
CCDC89-201ENST00000316398 CUX1P39880 1505 aa20.9■□□□□ 0.94
CCDC89-201ENST00000316398 GRIN2BQ13224 1484 aa20.9■□□□□ 0.94
CCDC89-201ENST00000316398 CLASP1Q7Z460 1538 aa20.87■□□□□ 0.93
CCDC89-201ENST00000316398 SYNJ2O15056 1496 aa20.85■□□□□ 0.93
CCDC89-201ENST00000316398 SYNJ1O43426 1573 aa20.83■□□□□ 0.93
CCDC89-201ENST00000316398 GAPVD1Q14C86 1478 aa20.8■□□□□ 0.92
CCDC89-201ENST00000316398 ABCA10Q8WWZ4 1543 aa20.76■□□□□ 0.91
CCDC89-201ENST00000316398 SUPT5HO00267 1087 aaKnown RBP20.68■□□□□ 0.9
CCDC89-201ENST00000316398 WRNQ14191 1432 aaPredicted RBP eCLIP20.67■□□□□ 0.9
CCDC89-201ENST00000316398 ABCA5Q8WWZ7 1642 aa20.65■□□□□ 0.9
CCDC89-201ENST00000316398 PBRM1Q86U86 1689 aa20.65■□□□□ 0.9
CCDC89-201ENST00000316398 GRIN2AQ12879 1464 aa20.6■□□□□ 0.89
CCDC89-201ENST00000316398 NUP160Q12769 1436 aa20.58■□□□□ 0.89
CCDC89-201ENST00000316398 FHAD1B1AJZ9 1412 aa20.55■□□□□ 0.88
CCDC89-201ENST00000316398 TOP2BQ02880 1626 aa20.53■□□□□ 0.88
CCDC89-201ENST00000316398 AEBP2Q6ZN18 517 aaPredicted RBP20.52■□□□□ 0.87
CCDC89-201ENST00000316398 ERCC6L2Q5T890 1561 aa20.51■□□□□ 0.87
CCDC89-201ENST00000316398 CEP170Q5SW79 1584 aa20.5■□□□□ 0.87
CCDC89-201ENST00000316398 BIVM-ERCC5R4GMW8 1640 aa20.49■□□□□ 0.87
CCDC89-201ENST00000316398 ADAMTS12P58397 1594 aa20.48■□□□□ 0.87
CCDC89-201ENST00000316398 ERICH3Q5RHP9 1530 aa20.48■□□□□ 0.87
CCDC89-201ENST00000316398 JPH4Q96JJ6 628 aa20.48■□□□□ 0.87
CCDC89-201ENST00000316398 SHROOM2Q13796 1616 aa20.46■□□□□ 0.87
CCDC89-201ENST00000316398 PRG4Q92954 1404 aaPredicted RBP20.4■□□□□ 0.86
CCDC89-201ENST00000316398 NPM1P06748 294 aaKnown RBP eCLIP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms