RNA–Protein interactions for RNA: ENST00000315938.4

GDPD4-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GDPD4, Length 2,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4-201ENST00000315938 NISCHQ9Y2I1 1504 aa16.87■□□□□ 0.29
GDPD4-201ENST00000315938 CCDC180Q9P1Z9 1646 aa15.31■□□□□ 0.04
GDPD4-201ENST00000315938 ABCC9O60706 1549 aa15.14■□□□□ 0.01
GDPD4-201ENST00000315938 RB1CC1Q8TDY2 1594 aa14.53□□□□□ -0.08
GDPD4-201ENST00000315938 NACADO15069 1562 aa14.43□□□□□ -0.1
GDPD4-201ENST00000315938 MYO15BQ96JP2 1530 aa14.25□□□□□ -0.13
GDPD4-201ENST00000315938 UNC13AQ9UPW8 1703 aa14.23□□□□□ -0.13
GDPD4-201ENST00000315938 DNAJC5BQ9UF47 199 aa14.19□□□□□ -0.14
GDPD4-201ENST00000315938 BICRAQ9NZM4 1560 aa14.07□□□□□ -0.16
GDPD4-201ENST00000315938 DCAF1Q9Y4B6 1507 aa14.03□□□□□ -0.16
GDPD4-201ENST00000315938 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
GDPD4-201ENST00000315938 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
GDPD4-201ENST00000315938 SHROOM4Q9ULL8 1493 aa14□□□□□ -0.17
GDPD4-201ENST00000315938 ZCCHC6Q5VYS8 1495 aaKnown RBP13.97□□□□□ -0.17
GDPD4-201ENST00000315938 SCRIBQ14160 1630 aa13.77□□□□□ -0.2
GDPD4-201ENST00000315938 CC2D2AQ9P2K1 1620 aa13.76□□□□□ -0.21
GDPD4-201ENST00000315938 EIF4G1Q04637 1599 aaKnown RBP13.72□□□□□ -0.21
GDPD4-201ENST00000315938 CECR2Q9BXF3 1484 aa13.69□□□□□ -0.22
GDPD4-201ENST00000315938 NCAPD3P42695 1498 aa13.26□□□□□ -0.29
GDPD4-201ENST00000315938 CUX2O14529 1486 aa13.22□□□□□ -0.29
GDPD4-201ENST00000315938 SMARCA2P51531 1590 aa13.21□□□□□ -0.29
GDPD4-201ENST00000315938 HMGXB3Q12766 1538 aa13.21□□□□□ -0.29
GDPD4-201ENST00000315938 SMARCA4P51532 1647 aa13.2□□□□□ -0.3
GDPD4-201ENST00000315938 ATAD2BQ9ULI0 1458 aa13.18□□□□□ -0.3
GDPD4-201ENST00000315938 DNAJC5Q9H3Z4 198 aa13.17□□□□□ -0.3
GDPD4-201ENST00000315938 PEG3Q9GZU2 1588 aa13.12□□□□□ -0.31
GDPD4-201ENST00000315938 BAZ1AQ9NRL2 1556 aaPredicted RBP13.12□□□□□ -0.31
GDPD4-201ENST00000315938 ERCC6Q03468 1493 aa13.11□□□□□ -0.31
GDPD4-201ENST00000315938 BAZ1BQ9UIG0 1483 aaKnown RBP13.05□□□□□ -0.32
GDPD4-201ENST00000315938 LAMC3Q9Y6N6 1575 aa13.02□□□□□ -0.32
GDPD4-201ENST00000315938 THOC2Q8NI27 1593 aaKnown RBP12.99□□□□□ -0.33
GDPD4-201ENST00000315938 NESP48681 1621 aa12.98□□□□□ -0.33
GDPD4-201ENST00000315938 MROH2BQ7Z745 1585 aa12.95□□□□□ -0.34
GDPD4-201ENST00000315938 KIF21AQ7Z4S6 1674 aa12.93□□□□□ -0.34
GDPD4-201ENST00000315938 PDS5BQ9NTI5 1447 aa12.89□□□□□ -0.35
GDPD4-201ENST00000315938 WIZO95785 1651 aa12.81□□□□□ -0.36
GDPD4-201ENST00000315938 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
GDPD4-201ENST00000315938 MRC2Q9UBG0 1479 aa12.8□□□□□ -0.36
GDPD4-201ENST00000315938 WDR62O43379 1518 aa12.79□□□□□ -0.36
GDPD4-201ENST00000315938 PRDM2Q13029 1718 aa12.72□□□□□ -0.37
GDPD4-201ENST00000315938 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.37
GDPD4-201ENST00000315938 TOP2AP11388 1531 aaKnown RBP12.7□□□□□ -0.38
GDPD4-201ENST00000315938 CFTRP13569 1480 aa12.68□□□□□ -0.38
GDPD4-201ENST00000315938 FANCD2Q9BXW9 1451 aa12.67□□□□□ -0.38
GDPD4-201ENST00000315938 RSF1Q96T23 1441 aaPredicted RBP12.64□□□□□ -0.39
GDPD4-201ENST00000315938 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
GDPD4-201ENST00000315938 ABCC8Q09428 1581 aa12.49□□□□□ -0.41
GDPD4-201ENST00000315938 IFT140Q96RY7 1462 aa12.49□□□□□ -0.41
GDPD4-201ENST00000315938 OSCARQ8IYS5 282 aa12.48□□□□□ -0.41
GDPD4-201ENST00000315938 CCDC88BA6NC98 1476 aa12.48□□□□□ -0.41
GDPD4-201ENST00000315938 TRIM41Q8WV44 630 aa12.46□□□□□ -0.41
GDPD4-201ENST00000315938 TOPBP1Q92547 1522 aa12.44□□□□□ -0.42
GDPD4-201ENST00000315938 DNMBPQ6XZF7 1577 aa12.44□□□□□ -0.42
GDPD4-201ENST00000315938 SLC24A1O60721 1099 aa12.41□□□□□ -0.42
GDPD4-201ENST00000315938 RIMBP3CA6NJZ7 1639 aa12.4□□□□□ -0.42
GDPD4-201ENST00000315938 RIMBP3BA6NNM3 1639 aa12.4□□□□□ -0.42
GDPD4-201ENST00000315938 RIMBP3Q9UFD9 1639 aa12.4□□□□□ -0.42
GDPD4-201ENST00000315938 EIF4G3O43432 1585 aaKnown RBP12.4□□□□□ -0.42
GDPD4-201ENST00000315938 ZNF608Q9ULD9 1512 aaPredicted RBP12.38□□□□□ -0.43
GDPD4-201ENST00000315938 TARBP1Q13395 1621 aaKnown RBP12.38□□□□□ -0.43
GDPD4-201ENST00000315938 WDR97A6NE52 1622 aa12.36□□□□□ -0.43
GDPD4-201ENST00000315938 CHD1O14646 1710 aa12.35□□□□□ -0.43
GDPD4-201ENST00000315938 ARHGEF11O15085 1522 aa12.32□□□□□ -0.44
GDPD4-201ENST00000315938 POLA1P09884 1462 aaPredicted RBP12.29□□□□□ -0.44
GDPD4-201ENST00000315938 AQRO60306 1485 aaKnown RBP eCLIP12.24□□□□□ -0.45
GDPD4-201ENST00000315938 SOGA1O94964 1423 aa12.22□□□□□ -0.45
GDPD4-201ENST00000315938 CHIC1Q5VXU3 224 aa12.21□□□□□ -0.45
GDPD4-201ENST00000315938 CLASP1Q7Z460 1538 aa12.2□□□□□ -0.46
GDPD4-201ENST00000315938 FGD5Q6ZNL6 1462 aa12.2□□□□□ -0.46
GDPD4-201ENST00000315938 MAGI1Q96QZ7 1491 aaPredicted RBP12.2□□□□□ -0.46
GDPD4-201ENST00000315938 RAD54L2Q9Y4B4 1467 aa12.19□□□□□ -0.46
GDPD4-201ENST00000315938 SYNJ1O43426 1573 aa12.19□□□□□ -0.46
GDPD4-201ENST00000315938 CUX1P39880 1505 aa12.19□□□□□ -0.46
GDPD4-201ENST00000315938 ARAP1Q96P48 1450 aa12.19□□□□□ -0.46
GDPD4-201ENST00000315938 PBRM1Q86U86 1689 aa12.18□□□□□ -0.46
GDPD4-201ENST00000315938 SNAPC4Q5SXM2 1469 aa12.17□□□□□ -0.46
GDPD4-201ENST00000315938 GRIN2BQ13224 1484 aa12.16□□□□□ -0.46
GDPD4-201ENST00000315938 TDRD9Q8NDG6 1382 aaKnown RBP12.14□□□□□ -0.47
GDPD4-201ENST00000315938 SYNJ2O15056 1496 aa12.13□□□□□ -0.47
GDPD4-201ENST00000315938 ABCA5Q8WWZ7 1642 aa12.12□□□□□ -0.47
GDPD4-201ENST00000315938 CYB5RLQ6IPT4 315 aa12.12□□□□□ -0.47
GDPD4-201ENST00000315938 FBLN2P98095 1184 aa12.1□□□□□ -0.47
GDPD4-201ENST00000315938 ABCA10Q8WWZ4 1543 aa12.1□□□□□ -0.47
GDPD4-201ENST00000315938 GAPVD1Q14C86 1478 aa12.09□□□□□ -0.47
GDPD4-201ENST00000315938 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
GDPD4-201ENST00000315938 BIVM-ERCC5R4GMW8 1640 aa12.07□□□□□ -0.48
GDPD4-201ENST00000315938 TOP2BQ02880 1626 aa12.03□□□□□ -0.48
GDPD4-201ENST00000315938 ADAMTS12P58397 1594 aa12.03□□□□□ -0.48
GDPD4-201ENST00000315938 TRHP20396 242 aaPredicted RBP12□□□□□ -0.49
GDPD4-201ENST00000315938 WRNQ14191 1432 aaPredicted RBP eCLIP12□□□□□ -0.49
GDPD4-201ENST00000315938 SHROOM2Q13796 1616 aa12□□□□□ -0.49
GDPD4-201ENST00000315938 GRIN2AQ12879 1464 aa11.99□□□□□ -0.49
GDPD4-201ENST00000315938 ERICH3Q5RHP9 1530 aa11.98□□□□□ -0.49
GDPD4-201ENST00000315938 NUP160Q12769 1436 aa11.97□□□□□ -0.49
GDPD4-201ENST00000315938 CEP170Q5SW79 1584 aa11.96□□□□□ -0.49
GDPD4-201ENST00000315938 AEBP2Q6ZN18 517 aaPredicted RBP11.96□□□□□ -0.5
GDPD4-201ENST00000315938 FHAD1B1AJZ9 1412 aa11.95□□□□□ -0.5
GDPD4-201ENST00000315938 ERCC6L2Q5T890 1561 aa11.9□□□□□ -0.5
GDPD4-201ENST00000315938 SUPT5HO00267 1087 aaKnown RBP11.88□□□□□ -0.51
GDPD4-201ENST00000315938 KIF13AQ9H1H9 1805 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms