RNA–Protein interactions for RNA: ENST00000314992.9

EXD1-201, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EXD1, Length 2,942 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-201ENST00000314992 NISCHQ9Y2I1 1504 aa14.06□□□□□ -0.16
EXD1-201ENST00000314992 ABCC9O60706 1549 aa13.59□□□□□ -0.23
EXD1-201ENST00000314992 DNAJC5BQ9UF47 199 aa13.57□□□□□ -0.24
EXD1-201ENST00000314992 DNAJC5Q9H3Z4 198 aa13.27□□□□□ -0.28
EXD1-201ENST00000314992 CCDC180Q9P1Z9 1646 aa13.26□□□□□ -0.29
EXD1-201ENST00000314992 RB1CC1Q8TDY2 1594 aa12.87□□□□□ -0.35
EXD1-201ENST00000314992 NACADO15069 1562 aa12.65□□□□□ -0.38
EXD1-201ENST00000314992 SHROOM4Q9ULL8 1493 aa12.61□□□□□ -0.39
EXD1-201ENST00000314992 UNC13AQ9UPW8 1703 aa12.59□□□□□ -0.39
EXD1-201ENST00000314992 BICRAQ9NZM4 1560 aa12.57□□□□□ -0.4
EXD1-201ENST00000314992 CECR2Q9BXF3 1484 aa12.48□□□□□ -0.41
EXD1-201ENST00000314992 CUX2O14529 1486 aa12.48□□□□□ -0.41
EXD1-201ENST00000314992 CC2D2AQ9P2K1 1620 aa12.46□□□□□ -0.42
EXD1-201ENST00000314992 MYO15BQ96JP2 1530 aa12.41□□□□□ -0.42
EXD1-201ENST00000314992 PABPN1Q86U42 306 aaKnown RBP eCLIP12.33□□□□□ -0.44
EXD1-201ENST00000314992 EIF4G1Q04637 1599 aaKnown RBP12.24□□□□□ -0.45
EXD1-201ENST00000314992 TRIM41Q8WV44 630 aa11.86□□□□□ -0.51
EXD1-201ENST00000314992 DCAF1Q9Y4B6 1507 aa11.85□□□□□ -0.51
EXD1-201ENST00000314992 THOC2Q8NI27 1593 aaKnown RBP11.83□□□□□ -0.52
EXD1-201ENST00000314992 ERCC6Q03468 1493 aa11.8□□□□□ -0.52
EXD1-201ENST00000314992 NCAPD3P42695 1498 aa11.65□□□□□ -0.54
EXD1-201ENST00000314992 SCRIBQ14160 1630 aa11.62□□□□□ -0.55
EXD1-201ENST00000314992 BAZ1AQ9NRL2 1556 aaPredicted RBP11.58□□□□□ -0.56
EXD1-201ENST00000314992 HMGXB3Q12766 1538 aa11.55□□□□□ -0.56
EXD1-201ENST00000314992 RIMBP3CA6NJZ7 1639 aa11.54□□□□□ -0.56
EXD1-201ENST00000314992 RIMBP3BA6NNM3 1639 aa11.54□□□□□ -0.56
EXD1-201ENST00000314992 RIMBP3Q9UFD9 1639 aa11.54□□□□□ -0.56
EXD1-201ENST00000314992 LAMC3Q9Y6N6 1575 aa11.54□□□□□ -0.56
EXD1-201ENST00000314992 ZCCHC6Q5VYS8 1495 aaKnown RBP11.51□□□□□ -0.57
EXD1-201ENST00000314992 WDR62O43379 1518 aa11.47□□□□□ -0.57
EXD1-201ENST00000314992 DCAF8L2P0C7V8 631 aa11.46□□□□□ -0.57
EXD1-201ENST00000314992 AEBP2Q6ZN18 517 aaPredicted RBP11.46□□□□□ -0.57
EXD1-201ENST00000314992 NESP48681 1621 aa11.45□□□□□ -0.58
EXD1-201ENST00000314992 KIF21AQ7Z4S6 1674 aa11.44□□□□□ -0.58
EXD1-201ENST00000314992 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
EXD1-201ENST00000314992 ATAD2BQ9ULI0 1458 aa11.38□□□□□ -0.59
EXD1-201ENST00000314992 ARHGEF11O15085 1522 aa11.37□□□□□ -0.59
EXD1-201ENST00000314992 SMARCA2P51531 1590 aa11.36□□□□□ -0.59
EXD1-201ENST00000314992 MRC2Q9UBG0 1479 aa11.36□□□□□ -0.59
EXD1-201ENST00000314992 PDS5BQ9NTI5 1447 aa11.35□□□□□ -0.59
EXD1-201ENST00000314992 PEG3Q9GZU2 1588 aa11.3□□□□□ -0.6
EXD1-201ENST00000314992 ILDR1Q86SU0 546 aaPredicted RBP11.29□□□□□ -0.6
EXD1-201ENST00000314992 ARAP1Q96P48 1450 aa11.21□□□□□ -0.62
EXD1-201ENST00000314992 RSF1Q96T23 1441 aaPredicted RBP11.17□□□□□ -0.62
EXD1-201ENST00000314992 SMARCA4P51532 1647 aa11.17□□□□□ -0.62
EXD1-201ENST00000314992 BAZ1BQ9UIG0 1483 aaKnown RBP11.12□□□□□ -0.63
EXD1-201ENST00000314992 CADPSQ9ULU8 1353 aa11.1□□□□□ -0.63
EXD1-201ENST00000314992 TRHP20396 242 aaPredicted RBP11.05□□□□□ -0.64
EXD1-201ENST00000314992 CEP164Q9UPV0 1460 aa11.04□□□□□ -0.64
EXD1-201ENST00000314992 ERCC6L2Q5T890 1561 aa11.01□□□□□ -0.65
EXD1-201ENST00000314992 CYB5RLQ6IPT4 315 aa10.99□□□□□ -0.65
EXD1-201ENST00000314992 CLASP1Q7Z460 1538 aa10.97□□□□□ -0.65
EXD1-201ENST00000314992 IFT140Q96RY7 1462 aa10.96□□□□□ -0.65
EXD1-201ENST00000314992 URB2Q14146 1524 aaKnown RBP10.96□□□□□ -0.66
EXD1-201ENST00000314992 CHD1O14646 1710 aa10.95□□□□□ -0.66
EXD1-201ENST00000314992 FANCD2Q9BXW9 1451 aa10.94□□□□□ -0.66
EXD1-201ENST00000314992 CFTRP13569 1480 aa10.88□□□□□ -0.67
EXD1-201ENST00000314992 EIF4G3O43432 1585 aaKnown RBP10.87□□□□□ -0.67
EXD1-201ENST00000314992 CHIC1Q5VXU3 224 aa10.87□□□□□ -0.67
EXD1-201ENST00000314992 PRDM2Q13029 1718 aa10.85□□□□□ -0.67
EXD1-201ENST00000314992 ZNF608Q9ULD9 1512 aaPredicted RBP10.85□□□□□ -0.67
EXD1-201ENST00000314992 WDR97A6NE52 1622 aa10.84□□□□□ -0.67
EXD1-201ENST00000314992 KIF13AQ9H1H9 1805 aa10.83□□□□□ -0.68
EXD1-201ENST00000314992 KDM4FA0A1W2PPD8 638 aa10.82□□□□□ -0.68
EXD1-201ENST00000314992 FBXO41Q8TF61 875 aa10.81□□□□□ -0.68
EXD1-201ENST00000314992 TARBP1Q13395 1621 aaKnown RBP10.77□□□□□ -0.69
EXD1-201ENST00000314992 SYNJ1O43426 1573 aa10.75□□□□□ -0.69
EXD1-201ENST00000314992 HECW2Q9P2P5 1572 aa10.75□□□□□ -0.69
EXD1-201ENST00000314992 ABCC8Q09428 1581 aa10.74□□□□□ -0.69
EXD1-201ENST00000314992 SOCS7O14512 581 aa10.74□□□□□ -0.69
EXD1-201ENST00000314992 MROH2BQ7Z745 1585 aa10.71□□□□□ -0.7
EXD1-201ENST00000314992 GAPVD1Q14C86 1478 aa10.7□□□□□ -0.7
EXD1-201ENST00000314992 LMTK3Q96Q04 1460 aa10.69□□□□□ -0.7
EXD1-201ENST00000314992 TOPBP1Q92547 1522 aa10.68□□□□□ -0.7
EXD1-201ENST00000314992 DNMBPQ6XZF7 1577 aa10.64□□□□□ -0.71
EXD1-201ENST00000314992 MAGI1Q96QZ7 1491 aaPredicted RBP10.63□□□□□ -0.71
EXD1-201ENST00000314992 ABCC10Q5T3U5 1492 aa10.61□□□□□ -0.71
EXD1-201ENST00000314992 MAPKBP1O60336 1514 aa10.61□□□□□ -0.71
EXD1-201ENST00000314992 KDM6BO15054 1643 aa10.61□□□□□ -0.71
EXD1-201ENST00000314992 SHROOM2Q13796 1616 aa10.59□□□□□ -0.71
EXD1-201ENST00000314992 DIP2BQ9P265 1576 aa10.58□□□□□ -0.72
EXD1-201ENST00000314992 ADGRL1O94910 1474 aa10.57□□□□□ -0.72
EXD1-201ENST00000314992 AQRO60306 1485 aaKnown RBP eCLIP10.57□□□□□ -0.72
EXD1-201ENST00000314992 SYNJ2O15056 1496 aa10.55□□□□□ -0.72
EXD1-201ENST00000314992 SNAPC4Q5SXM2 1469 aa10.53□□□□□ -0.72
EXD1-201ENST00000314992 WIZO95785 1651 aa10.5□□□□□ -0.73
EXD1-201ENST00000314992 ILDR2Q71H61 639 aa10.49□□□□□ -0.73
EXD1-201ENST00000314992 POLA1P09884 1462 aaPredicted RBP10.47□□□□□ -0.73
EXD1-201ENST00000314992 TOP2AP11388 1531 aaKnown RBP10.47□□□□□ -0.73
EXD1-201ENST00000314992 TOP2BQ02880 1626 aa10.47□□□□□ -0.73
EXD1-201ENST00000314992 CEP170Q5SW79 1584 aa10.47□□□□□ -0.73
EXD1-201ENST00000314992 GRIN2BQ13224 1484 aa10.46□□□□□ -0.73
EXD1-201ENST00000314992 PPRC1Q5VV67 1664 aaKnown RBP10.44□□□□□ -0.74
EXD1-201ENST00000314992 GLI2P10070 1586 aa10.43□□□□□ -0.74
EXD1-201ENST00000314992 NUP160Q12769 1436 aa10.43□□□□□ -0.74
EXD1-201ENST00000314992 SPATA31D1Q6ZQQ2 1576 aa10.42□□□□□ -0.74
EXD1-201ENST00000314992 PBRM1Q86U86 1689 aa10.41□□□□□ -0.74
EXD1-201ENST00000314992 CHMP7Q8WUX9 453 aaPredicted RBP10.35□□□□□ -0.75
EXD1-201ENST00000314992 FBLN2P98095 1184 aa10.34□□□□□ -0.75
EXD1-201ENST00000314992 ABCA5Q8WWZ7 1642 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 193.5 ms