RNA–Protein interactions for RNA: ENST00000314589.9

MITF-202, Transcript of melanogenesis associated transcription factor, humanhuman

TSL 2 BASIC

Gene MITF, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MITF-202ENST00000314589 NISCHQ9Y2I1 1504 aa21.22■□□□□ 0.99
MITF-202ENST00000314589 ABCC9O60706 1549 aa19.12■□□□□ 0.65
MITF-202ENST00000314589 CCDC180Q9P1Z9 1646 aa19.06■□□□□ 0.64
MITF-202ENST00000314589 RB1CC1Q8TDY2 1594 aa18.14■□□□□ 0.49
MITF-202ENST00000314589 NACADO15069 1562 aa17.99■□□□□ 0.47
MITF-202ENST00000314589 DNAJC5BQ9UF47 199 aa17.95■□□□□ 0.46
MITF-202ENST00000314589 DCAF8L2P0C7V8 631 aa17.91■□□□□ 0.46
MITF-202ENST00000314589 UNC13AQ9UPW8 1703 aa17.84■□□□□ 0.45
MITF-202ENST00000314589 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
MITF-202ENST00000314589 MYO15BQ96JP2 1530 aa17.7■□□□□ 0.42
MITF-202ENST00000314589 BICRAQ9NZM4 1560 aa17.67■□□□□ 0.42
MITF-202ENST00000314589 ZCCHC6Q5VYS8 1495 aaKnown RBP17.6■□□□□ 0.41
MITF-202ENST00000314589 DCAF1Q9Y4B6 1507 aa17.49■□□□□ 0.39
MITF-202ENST00000314589 SCRIBQ14160 1630 aa17.42■□□□□ 0.38
MITF-202ENST00000314589 SHROOM4Q9ULL8 1493 aa17.32■□□□□ 0.36
MITF-202ENST00000314589 CC2D2AQ9P2K1 1620 aa17.27■□□□□ 0.36
MITF-202ENST00000314589 EIF4G1Q04637 1599 aaKnown RBP17.21■□□□□ 0.35
MITF-202ENST00000314589 CECR2Q9BXF3 1484 aa17.19■□□□□ 0.34
MITF-202ENST00000314589 NCAPD3P42695 1498 aa16.6■□□□□ 0.25
MITF-202ENST00000314589 SMARCA4P51532 1647 aa16.59■□□□□ 0.25
MITF-202ENST00000314589 ATAD2BQ9ULI0 1458 aa16.58■□□□□ 0.25
MITF-202ENST00000314589 SMARCA2P51531 1590 aa16.51■□□□□ 0.23
MITF-202ENST00000314589 HMGXB3Q12766 1538 aa16.51■□□□□ 0.23
MITF-202ENST00000314589 ERCC6Q03468 1493 aa16.46■□□□□ 0.23
MITF-202ENST00000314589 BAZ1AQ9NRL2 1556 aaPredicted RBP16.46■□□□□ 0.23
MITF-202ENST00000314589 NESP48681 1621 aa16.44■□□□□ 0.22
MITF-202ENST00000314589 DNAJC5Q9H3Z4 198 aa16.42■□□□□ 0.22
MITF-202ENST00000314589 CUX2O14529 1486 aa16.42■□□□□ 0.22
MITF-202ENST00000314589 BAZ1BQ9UIG0 1483 aaKnown RBP16.42■□□□□ 0.22
MITF-202ENST00000314589 PEG3Q9GZU2 1588 aa16.39■□□□□ 0.21
MITF-202ENST00000314589 MROH2BQ7Z745 1585 aa16.39■□□□□ 0.21
MITF-202ENST00000314589 THOC2Q8NI27 1593 aaKnown RBP16.27■□□□□ 0.2
MITF-202ENST00000314589 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
MITF-202ENST00000314589 KIF21AQ7Z4S6 1674 aa16.25■□□□□ 0.19
MITF-202ENST00000314589 WIZO95785 1651 aa16.22■□□□□ 0.19
MITF-202ENST00000314589 PDS5BQ9NTI5 1447 aa16.12■□□□□ 0.17
MITF-202ENST00000314589 CADPSQ9ULU8 1353 aa16.1■□□□□ 0.17
MITF-202ENST00000314589 MRC2Q9UBG0 1479 aa16.03■□□□□ 0.16
MITF-202ENST00000314589 AEBP2Q6ZN18 517 aaPredicted RBP16.01■□□□□ 0.15
MITF-202ENST00000314589 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
MITF-202ENST00000314589 WDR62O43379 1518 aa16■□□□□ 0.15
MITF-202ENST00000314589 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
MITF-202ENST00000314589 TOP2AP11388 1531 aaKnown RBP15.96■□□□□ 0.15
MITF-202ENST00000314589 FANCD2Q9BXW9 1451 aa15.95■□□□□ 0.14
MITF-202ENST00000314589 CFTRP13569 1480 aa15.93■□□□□ 0.14
MITF-202ENST00000314589 URB2Q14146 1524 aaKnown RBP15.85■□□□□ 0.13
MITF-202ENST00000314589 PRDM2Q13029 1718 aa15.84■□□□□ 0.13
MITF-202ENST00000314589 CCDC88BA6NC98 1476 aa15.78■□□□□ 0.12
MITF-202ENST00000314589 TRIM41Q8WV44 630 aa15.75■□□□□ 0.11
MITF-202ENST00000314589 ZNF608Q9ULD9 1512 aaPredicted RBP15.67■□□□□ 0.1
MITF-202ENST00000314589 TOPBP1Q92547 1522 aa15.65■□□□□ 0.1
MITF-202ENST00000314589 OSCARQ8IYS5 282 aa15.63■□□□□ 0.09
MITF-202ENST00000314589 IFT140Q96RY7 1462 aa15.62■□□□□ 0.09
MITF-202ENST00000314589 EIF4G3O43432 1585 aaKnown RBP15.59■□□□□ 0.09
MITF-202ENST00000314589 DNMBPQ6XZF7 1577 aa15.59■□□□□ 0.09
MITF-202ENST00000314589 TARBP1Q13395 1621 aaKnown RBP15.55■□□□□ 0.08
MITF-202ENST00000314589 RIMBP3CA6NJZ7 1639 aa15.54■□□□□ 0.08
MITF-202ENST00000314589 RIMBP3BA6NNM3 1639 aa15.54■□□□□ 0.08
MITF-202ENST00000314589 RIMBP3Q9UFD9 1639 aa15.54■□□□□ 0.08
MITF-202ENST00000314589 ABCC8Q09428 1581 aa15.54■□□□□ 0.08
MITF-202ENST00000314589 AQRO60306 1485 aaKnown RBP eCLIP15.5■□□□□ 0.07
MITF-202ENST00000314589 CHD1O14646 1710 aa15.5■□□□□ 0.07
MITF-202ENST00000314589 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
MITF-202ENST00000314589 ARHGEF11O15085 1522 aa15.47■□□□□ 0.07
MITF-202ENST00000314589 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.07
MITF-202ENST00000314589 CUX1P39880 1505 aa15.4■□□□□ 0.06
MITF-202ENST00000314589 FGD5Q6ZNL6 1462 aa15.4■□□□□ 0.06
MITF-202ENST00000314589 SOGA1O94964 1423 aa15.39■□□□□ 0.05
MITF-202ENST00000314589 TDRD9Q8NDG6 1382 aaKnown RBP15.38■□□□□ 0.05
MITF-202ENST00000314589 FBLN2P98095 1184 aa15.37■□□□□ 0.05
MITF-202ENST00000314589 SNAPC4Q5SXM2 1469 aa15.35■□□□□ 0.05
MITF-202ENST00000314589 WDR97A6NE52 1622 aa15.33■□□□□ 0.05
MITF-202ENST00000314589 ARAP1Q96P48 1450 aa15.32■□□□□ 0.04
MITF-202ENST00000314589 CYB5RLQ6IPT4 315 aa15.31■□□□□ 0.04
MITF-202ENST00000314589 SUPT5HO00267 1087 aaKnown RBP15.29■□□□□ 0.04
MITF-202ENST00000314589 PBRM1Q86U86 1689 aa15.28■□□□□ 0.04
MITF-202ENST00000314589 CLASP1Q7Z460 1538 aa15.27■□□□□ 0.04
MITF-202ENST00000314589 GRIN2BQ13224 1484 aa15.26■□□□□ 0.03
MITF-202ENST00000314589 MAGI1Q96QZ7 1491 aaPredicted RBP15.26■□□□□ 0.03
MITF-202ENST00000314589 CHIC1Q5VXU3 224 aa15.23■□□□□ 0.03
MITF-202ENST00000314589 SYNJ1O43426 1573 aa15.23■□□□□ 0.03
MITF-202ENST00000314589 ABCA5Q8WWZ7 1642 aa15.22■□□□□ 0.03
MITF-202ENST00000314589 SYNJ2O15056 1496 aa15.22■□□□□ 0.03
MITF-202ENST00000314589 CHMP7Q8WUX9 453 aaPredicted RBP15.22■□□□□ 0.03
MITF-202ENST00000314589 GAPVD1Q14C86 1478 aa15.21■□□□□ 0.03
MITF-202ENST00000314589 ABCA10Q8WWZ4 1543 aa15.2■□□□□ 0.02
MITF-202ENST00000314589 BIVM-ERCC5R4GMW8 1640 aa15.15■□□□□ 0.02
MITF-202ENST00000314589 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
MITF-202ENST00000314589 TOP2BQ02880 1626 aa15.12■□□□□ 0.01
MITF-202ENST00000314589 ADAMTS12P58397 1594 aa15.1■□□□□ 0.01
MITF-202ENST00000314589 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
MITF-202ENST00000314589 ERCC6L2Q5T890 1561 aa15.09■□□□□ 0.01
MITF-202ENST00000314589 GRIN2AQ12879 1464 aa15.08■□□□□ 0.01
MITF-202ENST00000314589 CEP170Q5SW79 1584 aa15.07■□□□□ 0
MITF-202ENST00000314589 NUP160Q12769 1436 aa15.02■□□□□ -0
MITF-202ENST00000314589 ERICH3Q5RHP9 1530 aa15□□□□□ -0.01
MITF-202ENST00000314589 FHAD1B1AJZ9 1412 aa14.99□□□□□ -0.01
MITF-202ENST00000314589 SHROOM2Q13796 1616 aa14.99□□□□□ -0.01
MITF-202ENST00000314589 RUSC2Q8N2Y8 1516 aa14.9□□□□□ -0.02
MITF-202ENST00000314589 PRG4Q92954 1404 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 408.9 ms