RNA–Protein interactions for RNA: ENST00000311083.9

CSRP2-201, Transcript of cysteine and glycine rich protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP2, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP2-201ENST00000311083 NISCHQ9Y2I1 1504 aa31.78■■■□□ 2.68
CSRP2-201ENST00000311083 CCDC180Q9P1Z9 1646 aa28.36■■■□□ 2.13
CSRP2-201ENST00000311083 ABCC9O60706 1549 aa28.28■■■□□ 2.12
CSRP2-201ENST00000311083 RB1CC1Q8TDY2 1594 aa26.92■■□□□ 1.9
CSRP2-201ENST00000311083 DCAF8L2P0C7V8 631 aa26.89■■□□□ 1.9
CSRP2-201ENST00000311083 NACADO15069 1562 aa26.79■■□□□ 1.88
CSRP2-201ENST00000311083 MYO15BQ96JP2 1530 aa26.44■■□□□ 1.82
CSRP2-201ENST00000311083 PABPN1Q86U42 306 aaKnown RBP eCLIP26.41■■□□□ 1.82
CSRP2-201ENST00000311083 DNAJC5BQ9UF47 199 aa26.37■■□□□ 1.81
CSRP2-201ENST00000311083 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
CSRP2-201ENST00000311083 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
CSRP2-201ENST00000311083 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
CSRP2-201ENST00000311083 BICRAQ9NZM4 1560 aa26.16■■□□□ 1.78
CSRP2-201ENST00000311083 SCRIBQ14160 1630 aa25.96■■□□□ 1.75
CSRP2-201ENST00000311083 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
CSRP2-201ENST00000311083 CC2D2AQ9P2K1 1620 aa25.51■■□□□ 1.67
CSRP2-201ENST00000311083 EIF4G1Q04637 1599 aaKnown RBP25.49■■□□□ 1.67
CSRP2-201ENST00000311083 CECR2Q9BXF3 1484 aa25.41■■□□□ 1.66
CSRP2-201ENST00000311083 AEBP2Q6ZN18 517 aaPredicted RBP24.97■■□□□ 1.59
CSRP2-201ENST00000311083 NCAPD3P42695 1498 aa24.74■■□□□ 1.55
CSRP2-201ENST00000311083 SMARCA4P51532 1647 aa24.74■■□□□ 1.55
CSRP2-201ENST00000311083 ATAD2BQ9ULI0 1458 aa24.72■■□□□ 1.55
CSRP2-201ENST00000311083 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
CSRP2-201ENST00000311083 BAZ1AQ9NRL2 1556 aaPredicted RBP24.63■■□□□ 1.53
CSRP2-201ENST00000311083 HMGXB3Q12766 1538 aa24.55■■□□□ 1.52
CSRP2-201ENST00000311083 MROH2BQ7Z745 1585 aa24.53■■□□□ 1.52
CSRP2-201ENST00000311083 BAZ1BQ9UIG0 1483 aaKnown RBP24.5■■□□□ 1.51
CSRP2-201ENST00000311083 PEG3Q9GZU2 1588 aa24.45■■□□□ 1.5
CSRP2-201ENST00000311083 ERCC6Q03468 1493 aa24.38■■□□□ 1.49
CSRP2-201ENST00000311083 NESP48681 1621 aa24.35■■□□□ 1.49
CSRP2-201ENST00000311083 WIZO95785 1651 aa24.25■■□□□ 1.47
CSRP2-201ENST00000311083 CUX2O14529 1486 aa24.19■■□□□ 1.46
CSRP2-201ENST00000311083 LAMC3Q9Y6N6 1575 aa24.13■■□□□ 1.45
CSRP2-201ENST00000311083 RSF1Q96T23 1441 aaPredicted RBP24.1■■□□□ 1.45
CSRP2-201ENST00000311083 CADPSQ9ULU8 1353 aa24.03■■□□□ 1.44
CSRP2-201ENST00000311083 PDS5BQ9NTI5 1447 aa24.01■■□□□ 1.43
CSRP2-201ENST00000311083 KIF21AQ7Z4S6 1674 aa24.01■■□□□ 1.43
CSRP2-201ENST00000311083 DNAJC5Q9H3Z4 198 aa23.99■■□□□ 1.43
CSRP2-201ENST00000311083 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
CSRP2-201ENST00000311083 TOP2AP11388 1531 aaKnown RBP23.91■■□□□ 1.42
CSRP2-201ENST00000311083 CHIC1Q5VXU3 224 aa23.91■■□□□ 1.42
CSRP2-201ENST00000311083 MRC2Q9UBG0 1479 aa23.8■■□□□ 1.4
CSRP2-201ENST00000311083 CFTRP13569 1480 aa23.78■■□□□ 1.4
CSRP2-201ENST00000311083 FANCD2Q9BXW9 1451 aa23.76■■□□□ 1.39
CSRP2-201ENST00000311083 CEP164Q9UPV0 1460 aa23.75■■□□□ 1.39
CSRP2-201ENST00000311083 WDR62O43379 1518 aa23.7■■□□□ 1.38
CSRP2-201ENST00000311083 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
CSRP2-201ENST00000311083 URB2Q14146 1524 aaKnown RBP23.55■■□□□ 1.36
CSRP2-201ENST00000311083 PRDM2Q13029 1718 aa23.53■■□□□ 1.36
CSRP2-201ENST00000311083 TOPBP1Q92547 1522 aa23.33■■□□□ 1.33
CSRP2-201ENST00000311083 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
CSRP2-201ENST00000311083 IFT140Q96RY7 1462 aa23.25■■□□□ 1.31
CSRP2-201ENST00000311083 ZNF608Q9ULD9 1512 aaPredicted RBP23.25■■□□□ 1.31
CSRP2-201ENST00000311083 ABCC8Q09428 1581 aa23.25■■□□□ 1.31
CSRP2-201ENST00000311083 DNMBPQ6XZF7 1577 aa23.24■■□□□ 1.31
CSRP2-201ENST00000311083 OSCARQ8IYS5 282 aa23.2■■□□□ 1.3
CSRP2-201ENST00000311083 TRIM41Q8WV44 630 aa23.12■■□□□ 1.29
CSRP2-201ENST00000311083 POLA1P09884 1462 aaPredicted RBP23.11■■□□□ 1.29
CSRP2-201ENST00000311083 TARBP1Q13395 1621 aaKnown RBP23.09■■□□□ 1.29
CSRP2-201ENST00000311083 AQRO60306 1485 aaKnown RBP eCLIP23.09■■□□□ 1.29
CSRP2-201ENST00000311083 EIF4G3O43432 1585 aaKnown RBP23.09■■□□□ 1.29
CSRP2-201ENST00000311083 RAD54L2Q9Y4B4 1467 aa23.07■■□□□ 1.28
CSRP2-201ENST00000311083 SOGA1O94964 1423 aa23.04■■□□□ 1.28
CSRP2-201ENST00000311083 CUX1P39880 1505 aa23.03■■□□□ 1.28
CSRP2-201ENST00000311083 FGD5Q6ZNL6 1462 aa23■■□□□ 1.27
CSRP2-201ENST00000311083 TDRD9Q8NDG6 1382 aaKnown RBP22.99■■□□□ 1.27
CSRP2-201ENST00000311083 FBLN2P98095 1184 aa22.94■■□□□ 1.26
CSRP2-201ENST00000311083 CHD1O14646 1710 aa22.89■■□□□ 1.26
CSRP2-201ENST00000311083 RIMBP3CA6NJZ7 1639 aa22.85■■□□□ 1.25
CSRP2-201ENST00000311083 RIMBP3BA6NNM3 1639 aa22.85■■□□□ 1.25
CSRP2-201ENST00000311083 RIMBP3Q9UFD9 1639 aa22.85■■□□□ 1.25
CSRP2-201ENST00000311083 SNAPC4Q5SXM2 1469 aa22.83■■□□□ 1.25
CSRP2-201ENST00000311083 WDR97A6NE52 1622 aa22.8■■□□□ 1.24
CSRP2-201ENST00000311083 ARHGEF11O15085 1522 aa22.79■■□□□ 1.24
CSRP2-201ENST00000311083 GRIN2BQ13224 1484 aa22.77■■□□□ 1.24
CSRP2-201ENST00000311083 CHMP7Q8WUX9 453 aaPredicted RBP22.76■■□□□ 1.23
CSRP2-201ENST00000311083 GAPVD1Q14C86 1478 aa22.73■■□□□ 1.23
CSRP2-201ENST00000311083 MAGI1Q96QZ7 1491 aaPredicted RBP22.73■■□□□ 1.23
CSRP2-201ENST00000311083 ABCA10Q8WWZ4 1543 aa22.72■■□□□ 1.23
CSRP2-201ENST00000311083 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
CSRP2-201ENST00000311083 PBRM1Q86U86 1689 aa22.7■■□□□ 1.22
CSRP2-201ENST00000311083 SYNJ1O43426 1573 aa22.69■■□□□ 1.22
CSRP2-201ENST00000311083 CYB5RLQ6IPT4 315 aa22.69■■□□□ 1.22
CSRP2-201ENST00000311083 TOP2BQ02880 1626 aa22.68■■□□□ 1.22
CSRP2-201ENST00000311083 ABCA5Q8WWZ7 1642 aa22.67■■□□□ 1.22
CSRP2-201ENST00000311083 BIVM-ERCC5R4GMW8 1640 aa22.67■■□□□ 1.22
CSRP2-201ENST00000311083 SYNJ2O15056 1496 aa22.66■■□□□ 1.22
CSRP2-201ENST00000311083 CLASP1Q7Z460 1538 aa22.61■■□□□ 1.21
CSRP2-201ENST00000311083 ARAP1Q96P48 1450 aa22.59■■□□□ 1.21
CSRP2-201ENST00000311083 GRIN2AQ12879 1464 aa22.48■■□□□ 1.19
CSRP2-201ENST00000311083 ADAMTS12P58397 1594 aa22.48■■□□□ 1.19
CSRP2-201ENST00000311083 FHAD1B1AJZ9 1412 aa22.44■■□□□ 1.18
CSRP2-201ENST00000311083 ERICH3Q5RHP9 1530 aa22.43■■□□□ 1.18
CSRP2-201ENST00000311083 CEP170Q5SW79 1584 aa22.41■■□□□ 1.18
CSRP2-201ENST00000311083 NUP160Q12769 1436 aa22.39■■□□□ 1.17
CSRP2-201ENST00000311083 TRHP20396 242 aaPredicted RBP22.38■■□□□ 1.17
CSRP2-201ENST00000311083 ERCC6L2Q5T890 1561 aa22.34■■□□□ 1.17
CSRP2-201ENST00000311083 IGF1RP08069 1367 aa22.26■■□□□ 1.15
CSRP2-201ENST00000311083 KIF27Q86VH2 1401 aa22.26■■□□□ 1.15
CSRP2-201ENST00000311083 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms