RNA–Protein interactions for RNA: ENST00000302533.6

PYM1-201, Transcript of PYM homolog 1, exon junction complex associated factor, humanhuman

TSL 3

Gene PYM1, Length 890 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYM1-201ENST00000302533 NISCHQ9Y2I1 1504 aa27.98■■■□□ 2.07
PYM1-201ENST00000302533 ABCC9O60706 1549 aa25.27■■□□□ 1.64
PYM1-201ENST00000302533 CCDC180Q9P1Z9 1646 aa25.08■■□□□ 1.61
PYM1-201ENST00000302533 RB1CC1Q8TDY2 1594 aa23.97■■□□□ 1.43
PYM1-201ENST00000302533 DNAJC5BQ9UF47 199 aa23.85■■□□□ 1.41
PYM1-201ENST00000302533 NACADO15069 1562 aa23.79■■□□□ 1.4
PYM1-201ENST00000302533 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
PYM1-201ENST00000302533 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
PYM1-201ENST00000302533 MYO15BQ96JP2 1530 aa23.43■■□□□ 1.34
PYM1-201ENST00000302533 UNC13AQ9UPW8 1703 aa23.35■■□□□ 1.33
PYM1-201ENST00000302533 BICRAQ9NZM4 1560 aa23.27■■□□□ 1.32
PYM1-201ENST00000302533 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
PYM1-201ENST00000302533 DCAF1Q9Y4B6 1507 aa23.09■■□□□ 1.29
PYM1-201ENST00000302533 SHROOM4Q9ULL8 1493 aa22.95■■□□□ 1.26
PYM1-201ENST00000302533 SCRIBQ14160 1630 aa22.88■■□□□ 1.25
PYM1-201ENST00000302533 CC2D2AQ9P2K1 1620 aa22.79■■□□□ 1.24
PYM1-201ENST00000302533 CECR2Q9BXF3 1484 aa22.77■■□□□ 1.24
PYM1-201ENST00000302533 EIF4G1Q04637 1599 aaKnown RBP22.72■■□□□ 1.23
PYM1-201ENST00000302533 NCAPD3P42695 1498 aa22.01■■□□□ 1.11
PYM1-201ENST00000302533 DNAJC5Q9H3Z4 198 aa21.98■■□□□ 1.11
PYM1-201ENST00000302533 ATAD2BQ9ULI0 1458 aa21.91■■□□□ 1.1
PYM1-201ENST00000302533 AEBP2Q6ZN18 517 aaPredicted RBP21.89■■□□□ 1.09
PYM1-201ENST00000302533 SMARCA2P51531 1590 aa21.82■■□□□ 1.08
PYM1-201ENST00000302533 SMARCA4P51532 1647 aa21.82■■□□□ 1.08
PYM1-201ENST00000302533 ERCC6Q03468 1493 aa21.82■■□□□ 1.08
PYM1-201ENST00000302533 CUX2O14529 1486 aa21.81■■□□□ 1.08
PYM1-201ENST00000302533 HMGXB3Q12766 1538 aa21.78■■□□□ 1.08
PYM1-201ENST00000302533 CHIC1Q5VXU3 224 aa21.74■■□□□ 1.07
PYM1-201ENST00000302533 BAZ1AQ9NRL2 1556 aaPredicted RBP21.71■■□□□ 1.07
PYM1-201ENST00000302533 BAZ1BQ9UIG0 1483 aaKnown RBP21.68■■□□□ 1.06
PYM1-201ENST00000302533 NESP48681 1621 aa21.67■■□□□ 1.06
PYM1-201ENST00000302533 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
PYM1-201ENST00000302533 MROH2BQ7Z745 1585 aa21.57■■□□□ 1.04
PYM1-201ENST00000302533 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
PYM1-201ENST00000302533 THOC2Q8NI27 1593 aaKnown RBP21.41■■□□□ 1.02
PYM1-201ENST00000302533 PDS5BQ9NTI5 1447 aa21.41■■□□□ 1.02
PYM1-201ENST00000302533 CADPSQ9ULU8 1353 aa21.35■■□□□ 1.01
PYM1-201ENST00000302533 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
PYM1-201ENST00000302533 WIZO95785 1651 aa21.28■■□□□ 1
PYM1-201ENST00000302533 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
PYM1-201ENST00000302533 WDR62O43379 1518 aa21.13■□□□□ 0.97
PYM1-201ENST00000302533 RSF1Q96T23 1441 aaPredicted RBP21.11■□□□□ 0.97
PYM1-201ENST00000302533 CEP164Q9UPV0 1460 aa21.1■□□□□ 0.97
PYM1-201ENST00000302533 FANCD2Q9BXW9 1451 aa21.07■□□□□ 0.96
PYM1-201ENST00000302533 CFTRP13569 1480 aa21.06■□□□□ 0.96
PYM1-201ENST00000302533 TOP2AP11388 1531 aaKnown RBP21■□□□□ 0.95
PYM1-201ENST00000302533 TRIM41Q8WV44 630 aa20.97■□□□□ 0.95
PYM1-201ENST00000302533 URB2Q14146 1524 aaKnown RBP20.89■□□□□ 0.94
PYM1-201ENST00000302533 OSCARQ8IYS5 282 aa20.88■□□□□ 0.93
PYM1-201ENST00000302533 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
PYM1-201ENST00000302533 PRDM2Q13029 1718 aa20.71■□□□□ 0.91
PYM1-201ENST00000302533 IFT140Q96RY7 1462 aa20.69■□□□□ 0.9
PYM1-201ENST00000302533 ZNF608Q9ULD9 1512 aaPredicted RBP20.67■□□□□ 0.9
PYM1-201ENST00000302533 TOPBP1Q92547 1522 aa20.65■□□□□ 0.9
PYM1-201ENST00000302533 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
PYM1-201ENST00000302533 DNMBPQ6XZF7 1577 aa20.55■□□□□ 0.88
PYM1-201ENST00000302533 RIMBP3CA6NJZ7 1639 aa20.5■□□□□ 0.87
PYM1-201ENST00000302533 RIMBP3BA6NNM3 1639 aa20.5■□□□□ 0.87
PYM1-201ENST00000302533 RIMBP3Q9UFD9 1639 aa20.5■□□□□ 0.87
PYM1-201ENST00000302533 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.878e-7■■■■■ 28.7
PYM1-201ENST00000302533 EIF4G3O43432 1585 aaKnown RBP20.49■□□□□ 0.87
PYM1-201ENST00000302533 ARHGEF11O15085 1522 aa20.45■□□□□ 0.86
PYM1-201ENST00000302533 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.86
PYM1-201ENST00000302533 POLA1P09884 1462 aaPredicted RBP20.44■□□□□ 0.86
PYM1-201ENST00000302533 FBLN2P98095 1184 aa20.42■□□□□ 0.86
PYM1-201ENST00000302533 CYB5RLQ6IPT4 315 aa20.4■□□□□ 0.86
PYM1-201ENST00000302533 SOGA1O94964 1423 aa20.39■□□□□ 0.85
PYM1-201ENST00000302533 RAD54L2Q9Y4B4 1467 aa20.38■□□□□ 0.85
PYM1-201ENST00000302533 TDRD9Q8NDG6 1382 aaKnown RBP20.36■□□□□ 0.85
PYM1-201ENST00000302533 CHD1O14646 1710 aa20.33■□□□□ 0.85
PYM1-201ENST00000302533 FGD5Q6ZNL6 1462 aa20.3■□□□□ 0.84
PYM1-201ENST00000302533 CUX1P39880 1505 aa20.26■□□□□ 0.83
PYM1-201ENST00000302533 ARAP1Q96P48 1450 aa20.25■□□□□ 0.83
PYM1-201ENST00000302533 CHMP7Q8WUX9 453 aaPredicted RBP20.25■□□□□ 0.83
PYM1-201ENST00000302533 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
PYM1-201ENST00000302533 WDR97A6NE52 1622 aa20.23■□□□□ 0.83
PYM1-201ENST00000302533 TRHP20396 242 aaPredicted RBP20.2■□□□□ 0.82
PYM1-201ENST00000302533 GRIN2BQ13224 1484 aa20.19■□□□□ 0.82
PYM1-201ENST00000302533 MAGI1Q96QZ7 1491 aaPredicted RBP20.18■□□□□ 0.82
PYM1-201ENST00000302533 SUPT5HO00267 1087 aaKnown RBP20.16■□□□□ 0.82
PYM1-201ENST00000302533 CLASP1Q7Z460 1538 aa20.14■□□□□ 0.81
PYM1-201ENST00000302533 SYNJ1O43426 1573 aa20.13■□□□□ 0.81
PYM1-201ENST00000302533 SYNJ2O15056 1496 aa20.13■□□□□ 0.81
PYM1-201ENST00000302533 GAPVD1Q14C86 1478 aa20.11■□□□□ 0.81
PYM1-201ENST00000302533 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
PYM1-201ENST00000302533 PBRM1Q86U86 1689 aa20.02■□□□□ 0.8
PYM1-201ENST00000302533 ABCA5Q8WWZ7 1642 aa20■□□□□ 0.79
PYM1-201ENST00000302533 WRNQ14191 1432 aaPredicted RBP eCLIP19.99■□□□□ 0.79
PYM1-201ENST00000302533 GRIN2AQ12879 1464 aa19.92■□□□□ 0.78
PYM1-201ENST00000302533 TOP2BQ02880 1626 aa19.89■□□□□ 0.77
PYM1-201ENST00000302533 BIVM-ERCC5R4GMW8 1640 aa19.87■□□□□ 0.77
PYM1-201ENST00000302533 NUP160Q12769 1436 aa19.86■□□□□ 0.77
PYM1-201ENST00000302533 FHAD1B1AJZ9 1412 aa19.85■□□□□ 0.77
PYM1-201ENST00000302533 ADAMTS12P58397 1594 aa19.85■□□□□ 0.77
PYM1-201ENST00000302533 ERCC6L2Q5T890 1561 aa19.83■□□□□ 0.77
PYM1-201ENST00000302533 CEP170Q5SW79 1584 aa19.83■□□□□ 0.76
PYM1-201ENST00000302533 ERICH3Q5RHP9 1530 aa19.81■□□□□ 0.76
PYM1-201ENST00000302533 SHROOM2Q13796 1616 aa19.74■□□□□ 0.75
PYM1-201ENST00000302533 JPH4Q96JJ6 628 aa19.73■□□□□ 0.75
PYM1-201ENST00000302533 PRG4Q92954 1404 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms