RNA–Protein interactions for RNA: ENST00000301159.13

LIN37-201, Transcript of lin-37 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN37, Length 1,150 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN37-201ENST00000301159 NISCHQ9Y2I1 1504 aa25.4■■□□□ 1.66
LIN37-201ENST00000301159 ABCC9O60706 1549 aa23.01■■□□□ 1.27
LIN37-201ENST00000301159 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
LIN37-201ENST00000301159 RB1CC1Q8TDY2 1594 aa21.8■■□□□ 1.08
LIN37-201ENST00000301159 DNAJC5BQ9UF47 199 aa21.68■■□□□ 1.06
LIN37-201ENST00000301159 DCAF8L2P0C7V8 631 aa21.64■■□□□ 1.05
LIN37-201ENST00000301159 NACADO15069 1562 aa21.61■■□□□ 1.05
LIN37-201ENST00000301159 PABPN1Q86U42 306 aaKnown RBP eCLIP21.44■■□□□ 1.02
LIN37-201ENST00000301159 UNC13AQ9UPW8 1703 aa21.24■□□□□ 0.99
LIN37-201ENST00000301159 MYO15BQ96JP2 1530 aa21.24■□□□□ 0.99
LIN37-201ENST00000301159 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.97
LIN37-201ENST00000301159 ZCCHC6Q5VYS8 1495 aaKnown RBP21.01■□□□□ 0.95
LIN37-201ENST00000301159 DCAF1Q9Y4B6 1507 aa20.93■□□□□ 0.94
LIN37-201ENST00000301159 SCRIBQ14160 1630 aa20.83■□□□□ 0.93
LIN37-201ENST00000301159 SHROOM4Q9ULL8 1493 aa20.82■□□□□ 0.92
LIN37-201ENST00000301159 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
LIN37-201ENST00000301159 CECR2Q9BXF3 1484 aa20.72■□□□□ 0.91
LIN37-201ENST00000301159 EIF4G1Q04637 1599 aaKnown RBP20.65■□□□□ 0.9
LIN37-201ENST00000301159 DNAJC5Q9H3Z4 198 aa20.13■□□□□ 0.81
LIN37-201ENST00000301159 NCAPD3P42695 1498 aa19.97■□□□□ 0.79
LIN37-201ENST00000301159 ATAD2BQ9ULI0 1458 aa19.9■□□□□ 0.78
LIN37-201ENST00000301159 ERCC6Q03468 1493 aa19.88■□□□□ 0.77
LIN37-201ENST00000301159 CUX2O14529 1486 aa19.83■□□□□ 0.76
LIN37-201ENST00000301159 SMARCA2P51531 1590 aa19.83■□□□□ 0.76
LIN37-201ENST00000301159 SMARCA4P51532 1647 aa19.82■□□□□ 0.76
LIN37-201ENST00000301159 HMGXB3Q12766 1538 aa19.78■□□□□ 0.76
LIN37-201ENST00000301159 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
LIN37-201ENST00000301159 BAZ1BQ9UIG0 1483 aaKnown RBP19.72■□□□□ 0.75
LIN37-201ENST00000301159 NESP48681 1621 aa19.71■□□□□ 0.75
LIN37-201ENST00000301159 PEG3Q9GZU2 1588 aa19.61■□□□□ 0.73
LIN37-201ENST00000301159 MROH2BQ7Z745 1585 aa19.57■□□□□ 0.72
LIN37-201ENST00000301159 LAMC3Q9Y6N6 1575 aa19.52■□□□□ 0.71
LIN37-201ENST00000301159 THOC2Q8NI27 1593 aaKnown RBP19.49■□□□□ 0.71
LIN37-201ENST00000301159 PDS5BQ9NTI5 1447 aa19.45■□□□□ 0.7
LIN37-201ENST00000301159 KIF21AQ7Z4S6 1674 aa19.41■□□□□ 0.7
LIN37-201ENST00000301159 CADPSQ9ULU8 1353 aa19.38■□□□□ 0.69
LIN37-201ENST00000301159 WIZO95785 1651 aa19.33■□□□□ 0.69
LIN37-201ENST00000301159 MRC2Q9UBG0 1479 aa19.28■□□□□ 0.68
LIN37-201ENST00000301159 WDR62O43379 1518 aa19.2■□□□□ 0.66
LIN37-201ENST00000301159 CEP164Q9UPV0 1460 aa19.18■□□□□ 0.66
LIN37-201ENST00000301159 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
LIN37-201ENST00000301159 TRIM41Q8WV44 630 aa19.14■□□□□ 0.65
LIN37-201ENST00000301159 RSF1Q96T23 1441 aaPredicted RBP19.14■□□□□ 0.65
LIN37-201ENST00000301159 CFTRP13569 1480 aa19.1■□□□□ 0.65
LIN37-201ENST00000301159 TOP2AP11388 1531 aaKnown RBP19.07■□□□□ 0.64
LIN37-201ENST00000301159 URB2Q14146 1524 aaKnown RBP18.99■□□□□ 0.63
LIN37-201ENST00000301159 OSCARQ8IYS5 282 aa18.97■□□□□ 0.63
LIN37-201ENST00000301159 CCDC88BA6NC98 1476 aa18.9■□□□□ 0.62
LIN37-201ENST00000301159 PRDM2Q13029 1718 aa18.84■□□□□ 0.61
LIN37-201ENST00000301159 IFT140Q96RY7 1462 aa18.8■□□□□ 0.6
LIN37-201ENST00000301159 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
LIN37-201ENST00000301159 TOPBP1Q92547 1522 aa18.77■□□□□ 0.6
LIN37-201ENST00000301159 ABCC8Q09428 1581 aa18.72■□□□□ 0.59
LIN37-201ENST00000301159 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
LIN37-201ENST00000301159 RIMBP3CA6NJZ7 1639 aa18.67■□□□□ 0.58
LIN37-201ENST00000301159 RIMBP3BA6NNM3 1639 aa18.67■□□□□ 0.58
LIN37-201ENST00000301159 RIMBP3Q9UFD9 1639 aa18.67■□□□□ 0.58
LIN37-201ENST00000301159 EIF4G3O43432 1585 aaKnown RBP18.65■□□□□ 0.58
LIN37-201ENST00000301159 AQRO60306 1485 aaKnown RBP eCLIP18.63■□□□□ 0.573e-6■■□□□ 13.8
LIN37-201ENST00000301159 ARHGEF11O15085 1522 aa18.61■□□□□ 0.57
LIN37-201ENST00000301159 FBLN2P98095 1184 aa18.6■□□□□ 0.57
LIN37-201ENST00000301159 TARBP1Q13395 1621 aaKnown RBP18.57■□□□□ 0.56
LIN37-201ENST00000301159 POLA1P09884 1462 aaPredicted RBP18.57■□□□□ 0.56
LIN37-201ENST00000301159 CYB5RLQ6IPT4 315 aa18.56■□□□□ 0.56
LIN37-201ENST00000301159 RAD54L2Q9Y4B4 1467 aa18.53■□□□□ 0.56
LIN37-201ENST00000301159 CHD1O14646 1710 aa18.52■□□□□ 0.56
LIN37-201ENST00000301159 SOGA1O94964 1423 aa18.52■□□□□ 0.56
LIN37-201ENST00000301159 TDRD9Q8NDG6 1382 aaKnown RBP18.51■□□□□ 0.55
LIN37-201ENST00000301159 FGD5Q6ZNL6 1462 aa18.45■□□□□ 0.54
LIN37-201ENST00000301159 ARAP1Q96P48 1450 aa18.42■□□□□ 0.54
LIN37-201ENST00000301159 TRHP20396 242 aaPredicted RBP18.42■□□□□ 0.54
LIN37-201ENST00000301159 SNAPC4Q5SXM2 1469 aa18.41■□□□□ 0.54
LIN37-201ENST00000301159 CHMP7Q8WUX9 453 aaPredicted RBP18.41■□□□□ 0.54
LIN37-201ENST00000301159 CUX1P39880 1505 aa18.39■□□□□ 0.54
LIN37-201ENST00000301159 WDR97A6NE52 1622 aa18.36■□□□□ 0.53
LIN37-201ENST00000301159 GRIN2BQ13224 1484 aa18.34■□□□□ 0.53
LIN37-201ENST00000301159 MAGI1Q96QZ7 1491 aaPredicted RBP18.34■□□□□ 0.53
LIN37-201ENST00000301159 SUPT5HO00267 1087 aaKnown RBP18.32■□□□□ 0.52
LIN37-201ENST00000301159 SYNJ1O43426 1573 aa18.31■□□□□ 0.52
LIN37-201ENST00000301159 CLASP1Q7Z460 1538 aa18.31■□□□□ 0.52
LIN37-201ENST00000301159 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
LIN37-201ENST00000301159 GAPVD1Q14C86 1478 aa18.27■□□□□ 0.52
LIN37-201ENST00000301159 PBRM1Q86U86 1689 aa18.22■□□□□ 0.51
LIN37-201ENST00000301159 ABCA10Q8WWZ4 1543 aa18.21■□□□□ 0.51
LIN37-201ENST00000301159 ABCA5Q8WWZ7 1642 aa18.17■□□□□ 0.5
LIN37-201ENST00000301159 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.5
LIN37-201ENST00000301159 GRIN2AQ12879 1464 aa18.1■□□□□ 0.49
LIN37-201ENST00000301159 AEBP2Q6ZN18 517 aaPredicted RBP18.09■□□□□ 0.49
LIN37-201ENST00000301159 TOP2BQ02880 1626 aa18.05■□□□□ 0.48
LIN37-201ENST00000301159 ADAMTS12P58397 1594 aa18.05■□□□□ 0.48
LIN37-201ENST00000301159 ERCC6L2Q5T890 1561 aa18.04■□□□□ 0.48
LIN37-201ENST00000301159 BIVM-ERCC5R4GMW8 1640 aa18.04■□□□□ 0.48
LIN37-201ENST00000301159 FHAD1B1AJZ9 1412 aa18.03■□□□□ 0.48
LIN37-201ENST00000301159 NUP160Q12769 1436 aa18.03■□□□□ 0.48
LIN37-201ENST00000301159 CEP170Q5SW79 1584 aa18.03■□□□□ 0.48
LIN37-201ENST00000301159 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
LIN37-201ENST00000301159 SHROOM2Q13796 1616 aa17.94■□□□□ 0.46
LIN37-201ENST00000301159 PRG4Q92954 1404 aaPredicted RBP17.92■□□□□ 0.46
LIN37-201ENST00000301159 JPH4Q96JJ6 628 aa17.91■□□□□ 0.46
LIN37-201ENST00000301159 NPM1P06748 294 aaKnown RBP eCLIP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms