RNA–Protein interactions for RNA: ENST00000298190.10

KRBOX4-201, Transcript of KRAB box domain containing 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene KRBOX4, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRBOX4-201ENST00000298190 NISCHQ9Y2I1 1504 aa26.15■■□□□ 1.78
KRBOX4-201ENST00000298190 CCDC180Q9P1Z9 1646 aa23.52■■□□□ 1.36
KRBOX4-201ENST00000298190 ABCC9O60706 1549 aa23.44■■□□□ 1.34
KRBOX4-201ENST00000298190 RB1CC1Q8TDY2 1594 aa22.38■■□□□ 1.17
KRBOX4-201ENST00000298190 NACADO15069 1562 aa22.24■■□□□ 1.15
KRBOX4-201ENST00000298190 DNAJC5BQ9UF47 199 aa22.04■■□□□ 1.12
KRBOX4-201ENST00000298190 MYO15BQ96JP2 1530 aa22■■□□□ 1.11
KRBOX4-201ENST00000298190 DCAF8L2P0C7V8 631 aa21.89■■□□□ 1.1
KRBOX4-201ENST00000298190 UNC13AQ9UPW8 1703 aa21.81■■□□□ 1.08
KRBOX4-201ENST00000298190 PABPN1Q86U42 306 aaKnown RBP eCLIP21.78■■□□□ 1.08
KRBOX4-201ENST00000298190 BICRAQ9NZM4 1560 aa21.74■■□□□ 1.07
KRBOX4-201ENST00000298190 DCAF1Q9Y4B6 1507 aa21.68■■□□□ 1.06
KRBOX4-201ENST00000298190 ZCCHC6Q5VYS8 1495 aaKnown RBP21.67■■□□□ 1.06
KRBOX4-201ENST00000298190 SHROOM4Q9ULL8 1493 aa21.55■■□□□ 1.04
KRBOX4-201ENST00000298190 SCRIBQ14160 1630 aa21.31■■□□□ 1
KRBOX4-201ENST00000298190 CC2D2AQ9P2K1 1620 aa21.21■□□□□ 0.99
KRBOX4-201ENST00000298190 EIF4G1Q04637 1599 aaKnown RBP21.18■□□□□ 0.98
KRBOX4-201ENST00000298190 CECR2Q9BXF3 1484 aa21.17■□□□□ 0.98
KRBOX4-201ENST00000298190 AEBP2Q6ZN18 517 aaPredicted RBP20.72■□□□□ 0.91
KRBOX4-201ENST00000298190 NCAPD3P42695 1498 aa20.54■□□□□ 0.88
KRBOX4-201ENST00000298190 ATAD2BQ9ULI0 1458 aa20.43■□□□□ 0.86
KRBOX4-201ENST00000298190 SMARCA4P51532 1647 aa20.39■□□□□ 0.86
KRBOX4-201ENST00000298190 HMGXB3Q12766 1538 aa20.39■□□□□ 0.85
KRBOX4-201ENST00000298190 SMARCA2P51531 1590 aa20.39■□□□□ 0.85
KRBOX4-201ENST00000298190 CUX2O14529 1486 aa20.33■□□□□ 0.84
KRBOX4-201ENST00000298190 DNAJC5Q9H3Z4 198 aa20.33■□□□□ 0.84
KRBOX4-201ENST00000298190 BAZ1AQ9NRL2 1556 aaPredicted RBP20.31■□□□□ 0.84
KRBOX4-201ENST00000298190 PEG3Q9GZU2 1588 aa20.28■□□□□ 0.84
KRBOX4-201ENST00000298190 ERCC6Q03468 1493 aa20.25■□□□□ 0.83
KRBOX4-201ENST00000298190 BAZ1BQ9UIG0 1483 aaKnown RBP20.21■□□□□ 0.83
KRBOX4-201ENST00000298190 NESP48681 1621 aa20.13■□□□□ 0.81
KRBOX4-201ENST00000298190 MROH2BQ7Z745 1585 aa20.11■□□□□ 0.81
KRBOX4-201ENST00000298190 LAMC3Q9Y6N6 1575 aa20.06■□□□□ 0.8
KRBOX4-201ENST00000298190 THOC2Q8NI27 1593 aaKnown RBP20■□□□□ 0.79
KRBOX4-201ENST00000298190 PDS5BQ9NTI5 1447 aa19.93■□□□□ 0.78
KRBOX4-201ENST00000298190 CADPSQ9ULU8 1353 aa19.88■□□□□ 0.77
KRBOX4-201ENST00000298190 KIF21AQ7Z4S6 1674 aa19.88■□□□□ 0.77
KRBOX4-201ENST00000298190 WIZO95785 1651 aa19.83■□□□□ 0.77
KRBOX4-201ENST00000298190 MRC2Q9UBG0 1479 aa19.76■□□□□ 0.75
KRBOX4-201ENST00000298190 WDR62O43379 1518 aa19.74■□□□□ 0.75
KRBOX4-201ENST00000298190 RSF1Q96T23 1441 aaPredicted RBP19.7■□□□□ 0.74
KRBOX4-201ENST00000298190 CFTRP13569 1480 aa19.67■□□□□ 0.74
KRBOX4-201ENST00000298190 CEP164Q9UPV0 1460 aa19.65■□□□□ 0.74
KRBOX4-201ENST00000298190 TOP2AP11388 1531 aaKnown RBP19.65■□□□□ 0.74
KRBOX4-201ENST00000298190 FANCD2Q9BXW9 1451 aa19.63■□□□□ 0.73
KRBOX4-201ENST00000298190 CHIC1Q5VXU3 224 aa19.48■□□□□ 0.71
KRBOX4-201ENST00000298190 URB2Q14146 1524 aaKnown RBP19.47■□□□□ 0.71
KRBOX4-201ENST00000298190 PRDM2Q13029 1718 aa19.42■□□□□ 0.7
KRBOX4-201ENST00000298190 CCDC88BA6NC98 1476 aa19.4■□□□□ 0.7
KRBOX4-201ENST00000298190 OSCARQ8IYS5 282 aa19.32■□□□□ 0.68
KRBOX4-201ENST00000298190 IFT140Q96RY7 1462 aa19.29■□□□□ 0.68
KRBOX4-201ENST00000298190 TRIM41Q8WV44 630 aa19.28■□□□□ 0.68
KRBOX4-201ENST00000298190 ABCC8Q09428 1581 aa19.26■□□□□ 0.67
KRBOX4-201ENST00000298190 TOPBP1Q92547 1522 aa19.26■□□□□ 0.67
KRBOX4-201ENST00000298190 ZNF608Q9ULD9 1512 aaPredicted RBP19.22■□□□□ 0.67
KRBOX4-201ENST00000298190 DNMBPQ6XZF7 1577 aa19.2■□□□□ 0.66
KRBOX4-201ENST00000298190 EIF4G3O43432 1585 aaKnown RBP19.13■□□□□ 0.65
KRBOX4-201ENST00000298190 TARBP1Q13395 1621 aaKnown RBP19.12■□□□□ 0.65
KRBOX4-201ENST00000298190 RIMBP3CA6NJZ7 1639 aa19.08■□□□□ 0.64
KRBOX4-201ENST00000298190 RIMBP3BA6NNM3 1639 aa19.08■□□□□ 0.64
KRBOX4-201ENST00000298190 RIMBP3Q9UFD9 1639 aa19.08■□□□□ 0.64
KRBOX4-201ENST00000298190 POLA1P09884 1462 aaPredicted RBP19.06■□□□□ 0.64
KRBOX4-201ENST00000298190 ARHGEF11O15085 1522 aa19.03■□□□□ 0.64
KRBOX4-201ENST00000298190 AQRO60306 1485 aaKnown RBP eCLIP19.02■□□□□ 0.64
KRBOX4-201ENST00000298190 WDR97A6NE52 1622 aa18.98■□□□□ 0.63
KRBOX4-201ENST00000298190 CHD1O14646 1710 aa18.96■□□□□ 0.63
KRBOX4-201ENST00000298190 SOGA1O94964 1423 aa18.95■□□□□ 0.62
KRBOX4-201ENST00000298190 RAD54L2Q9Y4B4 1467 aa18.94■□□□□ 0.62
KRBOX4-201ENST00000298190 FGD5Q6ZNL6 1462 aa18.92■□□□□ 0.62
KRBOX4-201ENST00000298190 CUX1P39880 1505 aa18.91■□□□□ 0.62
KRBOX4-201ENST00000298190 TDRD9Q8NDG6 1382 aaKnown RBP18.89■□□□□ 0.61
KRBOX4-201ENST00000298190 MAGI1Q96QZ7 1491 aaPredicted RBP18.85■□□□□ 0.61
KRBOX4-201ENST00000298190 SNAPC4Q5SXM2 1469 aa18.84■□□□□ 0.61
KRBOX4-201ENST00000298190 ARAP1Q96P48 1450 aa18.84■□□□□ 0.61
KRBOX4-201ENST00000298190 GRIN2BQ13224 1484 aa18.83■□□□□ 0.6
KRBOX4-201ENST00000298190 FBLN2P98095 1184 aa18.82■□□□□ 0.6
KRBOX4-201ENST00000298190 CLASP1Q7Z460 1538 aa18.82■□□□□ 0.6
KRBOX4-201ENST00000298190 CYB5RLQ6IPT4 315 aa18.81■□□□□ 0.6
KRBOX4-201ENST00000298190 SYNJ2O15056 1496 aa18.77■□□□□ 0.6
KRBOX4-201ENST00000298190 SYNJ1O43426 1573 aa18.77■□□□□ 0.59
KRBOX4-201ENST00000298190 ABCA10Q8WWZ4 1543 aa18.75■□□□□ 0.59
KRBOX4-201ENST00000298190 CHMP7Q8WUX9 453 aaPredicted RBP18.74■□□□□ 0.59
KRBOX4-201ENST00000298190 GAPVD1Q14C86 1478 aa18.73■□□□□ 0.59
KRBOX4-201ENST00000298190 ABCA5Q8WWZ7 1642 aa18.71■□□□□ 0.59
KRBOX4-201ENST00000298190 PBRM1Q86U86 1689 aa18.7■□□□□ 0.58
KRBOX4-201ENST00000298190 WRNQ14191 1432 aaPredicted RBP eCLIP18.64■□□□□ 0.57
KRBOX4-201ENST00000298190 SUPT5HO00267 1087 aaKnown RBP18.63■□□□□ 0.57
KRBOX4-201ENST00000298190 BIVM-ERCC5R4GMW8 1640 aa18.62■□□□□ 0.57
KRBOX4-201ENST00000298190 TOP2BQ02880 1626 aa18.61■□□□□ 0.57
KRBOX4-201ENST00000298190 TRHP20396 242 aaPredicted RBP18.58■□□□□ 0.57
KRBOX4-201ENST00000298190 GRIN2AQ12879 1464 aa18.58■□□□□ 0.56
KRBOX4-201ENST00000298190 ADAMTS12P58397 1594 aa18.56■□□□□ 0.56
KRBOX4-201ENST00000298190 NUP160Q12769 1436 aa18.55■□□□□ 0.56
KRBOX4-201ENST00000298190 FHAD1B1AJZ9 1412 aa18.52■□□□□ 0.55
KRBOX4-201ENST00000298190 ERICH3Q5RHP9 1530 aa18.51■□□□□ 0.55
KRBOX4-201ENST00000298190 CEP170Q5SW79 1584 aa18.5■□□□□ 0.55
KRBOX4-201ENST00000298190 SHROOM2Q13796 1616 aa18.48■□□□□ 0.55
KRBOX4-201ENST00000298190 ERCC6L2Q5T890 1561 aa18.45■□□□□ 0.54
KRBOX4-201ENST00000298190 PRG4Q92954 1404 aaPredicted RBP18.31■□□□□ 0.52
KRBOX4-201ENST00000298190 RUSC2Q8N2Y8 1516 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 191.3 ms