RNA–Protein interactions for RNA: ENST00000297435.2

DEFA4-201, Transcript of defensin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFA4, Length 617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4-201ENST00000297435 NISCHQ9Y2I1 1504 aa23.63■■□□□ 1.37
DEFA4-201ENST00000297435 CCDC180Q9P1Z9 1646 aa20.86■□□□□ 0.93
DEFA4-201ENST00000297435 ABCC9O60706 1549 aa19.81■□□□□ 0.76
DEFA4-201ENST00000297435 ZCCHC6Q5VYS8 1495 aaKnown RBP19.78■□□□□ 0.76
DEFA4-201ENST00000297435 DCAF1Q9Y4B6 1507 aa19.61■□□□□ 0.73
DEFA4-201ENST00000297435 DCAF8L2P0C7V8 631 aa19.54■□□□□ 0.72
DEFA4-201ENST00000297435 MYO15BQ96JP2 1530 aa19.5■□□□□ 0.71
DEFA4-201ENST00000297435 NACADO15069 1562 aa19.46■□□□□ 0.71
DEFA4-201ENST00000297435 RB1CC1Q8TDY2 1594 aa19.36■□□□□ 0.69
DEFA4-201ENST00000297435 SCRIBQ14160 1630 aa19■□□□□ 0.63
DEFA4-201ENST00000297435 UNC13AQ9UPW8 1703 aa18.95■□□□□ 0.62
DEFA4-201ENST00000297435 SHROOM4Q9ULL8 1493 aa18.93■□□□□ 0.62
DEFA4-201ENST00000297435 BICRAQ9NZM4 1560 aa18.68■□□□□ 0.58
DEFA4-201ENST00000297435 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
DEFA4-201ENST00000297435 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
DEFA4-201ENST00000297435 CECR2Q9BXF3 1484 aa18.29■□□□□ 0.52
DEFA4-201ENST00000297435 SMARCA4P51532 1647 aa18.24■□□□□ 0.51
DEFA4-201ENST00000297435 MROH2BQ7Z745 1585 aa18.19■□□□□ 0.5
DEFA4-201ENST00000297435 EIF4G1Q04637 1599 aaKnown RBP18.17■□□□□ 0.5
DEFA4-201ENST00000297435 RSF1Q96T23 1441 aaPredicted RBP18.16■□□□□ 0.5
DEFA4-201ENST00000297435 SUPT5HO00267 1087 aaKnown RBP18.12■□□□□ 0.49
DEFA4-201ENST00000297435 PEG3Q9GZU2 1588 aa18.06■□□□□ 0.48
DEFA4-201ENST00000297435 WIZO95785 1651 aa18.06■□□□□ 0.48
DEFA4-201ENST00000297435 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
DEFA4-201ENST00000297435 CC2D2AQ9P2K1 1620 aa17.98■□□□□ 0.47
DEFA4-201ENST00000297435 ATAD2BQ9ULI0 1458 aa17.97■□□□□ 0.47
DEFA4-201ENST00000297435 NCAPD3P42695 1498 aa17.9■□□□□ 0.46
DEFA4-201ENST00000297435 TOP2AP11388 1531 aaKnown RBP17.9■□□□□ 0.46
DEFA4-201ENST00000297435 BAZ1BQ9UIG0 1483 aaKnown RBP17.89■□□□□ 0.45
DEFA4-201ENST00000297435 HMGXB3Q12766 1538 aa17.89■□□□□ 0.45
DEFA4-201ENST00000297435 CCDC88BA6NC98 1476 aa17.66■□□□□ 0.42
DEFA4-201ENST00000297435 DNAJC5BQ9UF47 199 aa17.64■□□□□ 0.41
DEFA4-201ENST00000297435 PRDM2Q13029 1718 aa17.46■□□□□ 0.39
DEFA4-201ENST00000297435 CFTRP13569 1480 aa17.41■□□□□ 0.38
DEFA4-201ENST00000297435 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
DEFA4-201ENST00000297435 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
DEFA4-201ENST00000297435 NESP48681 1621 aa17.27■□□□□ 0.36
DEFA4-201ENST00000297435 PDS5BQ9NTI5 1447 aa17.24■□□□□ 0.35
DEFA4-201ENST00000297435 FANCD2Q9BXW9 1451 aa17.21■□□□□ 0.35
DEFA4-201ENST00000297435 CHIC1Q5VXU3 224 aa17.21■□□□□ 0.35
DEFA4-201ENST00000297435 KIF21AQ7Z4S6 1674 aa17.17■□□□□ 0.34
DEFA4-201ENST00000297435 ABCC8Q09428 1581 aa17.16■□□□□ 0.34
DEFA4-201ENST00000297435 CEP164Q9UPV0 1460 aa17.16■□□□□ 0.34
DEFA4-201ENST00000297435 WRNQ14191 1432 aaPredicted RBP eCLIP17.14■□□□□ 0.33
DEFA4-201ENST00000297435 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
DEFA4-201ENST00000297435 BIVM-ERCC5R4GMW8 1640 aa17.09■□□□□ 0.33
DEFA4-201ENST00000297435 TOP2BQ02880 1626 aa17.08■□□□□ 0.32
DEFA4-201ENST00000297435 ERCC6Q03468 1493 aa17.08■□□□□ 0.32
DEFA4-201ENST00000297435 SYNJ1O43426 1573 aa17.06■□□□□ 0.32
DEFA4-201ENST00000297435 DNMBPQ6XZF7 1577 aa17.04■□□□□ 0.32
DEFA4-201ENST00000297435 CUX1P39880 1505 aa17.04■□□□□ 0.32
DEFA4-201ENST00000297435 MRC2Q9UBG0 1479 aa17.01■□□□□ 0.31
DEFA4-201ENST00000297435 TOPBP1Q92547 1522 aa16.99■□□□□ 0.31
DEFA4-201ENST00000297435 URB2Q14146 1524 aaKnown RBP16.98■□□□□ 0.31
DEFA4-201ENST00000297435 WDR62O43379 1518 aa16.94■□□□□ 0.3
DEFA4-201ENST00000297435 THOC2Q8NI27 1593 aaKnown RBP16.94■□□□□ 0.3
DEFA4-201ENST00000297435 FGD5Q6ZNL6 1462 aa16.91■□□□□ 0.3
DEFA4-201ENST00000297435 POLA1P09884 1462 aaPredicted RBP16.86■□□□□ 0.29
DEFA4-201ENST00000297435 SOGA1O94964 1423 aa16.83■□□□□ 0.28
DEFA4-201ENST00000297435 EEA1Q15075 1411 aa16.82■□□□□ 0.28
DEFA4-201ENST00000297435 WDR97A6NE52 1622 aa16.78■□□□□ 0.28
DEFA4-201ENST00000297435 ABCA10Q8WWZ4 1543 aa16.78■□□□□ 0.28
DEFA4-201ENST00000297435 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
DEFA4-201ENST00000297435 IFT140Q96RY7 1462 aa16.77■□□□□ 0.28
DEFA4-201ENST00000297435 RAD54L2Q9Y4B4 1467 aa16.77■□□□□ 0.28
DEFA4-201ENST00000297435 KIF27Q86VH2 1401 aa16.77■□□□□ 0.27
DEFA4-201ENST00000297435 CUX2O14529 1486 aa16.76■□□□□ 0.27
DEFA4-201ENST00000297435 FAM9AQ8IZU1 332 aaPredicted RBP16.71■□□□□ 0.27
DEFA4-201ENST00000297435 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
DEFA4-201ENST00000297435 CSRNP3Q8WYN3 585 aa16.69■□□□□ 0.26
DEFA4-201ENST00000297435 ABCA5Q8WWZ7 1642 aa16.68■□□□□ 0.26
DEFA4-201ENST00000297435 GAPVD1Q14C86 1478 aa16.65■□□□□ 0.26
DEFA4-201ENST00000297435 TDRD9Q8NDG6 1382 aaKnown RBP16.64■□□□□ 0.26
DEFA4-201ENST00000297435 PBRM1Q86U86 1689 aa16.64■□□□□ 0.25
DEFA4-201ENST00000297435 ERICH3Q5RHP9 1530 aa16.62■□□□□ 0.25
DEFA4-201ENST00000297435 EIF4G3O43432 1585 aaKnown RBP16.61■□□□□ 0.25
DEFA4-201ENST00000297435 CUL7Q14999 1698 aa16.61■□□□□ 0.25
DEFA4-201ENST00000297435 ZNF608Q9ULD9 1512 aaPredicted RBP16.6■□□□□ 0.25
DEFA4-201ENST00000297435 KIF21BO75037 1637 aa16.59■□□□□ 0.25
DEFA4-201ENST00000297435 IGF1RP08069 1367 aa16.59■□□□□ 0.25
DEFA4-201ENST00000297435 AQRO60306 1485 aaKnown RBP eCLIP16.58■□□□□ 0.24
DEFA4-201ENST00000297435 GRIN2BQ13224 1484 aa16.58■□□□□ 0.24
DEFA4-201ENST00000297435 PRXQ9BXM0 1461 aa16.54■□□□□ 0.24
DEFA4-201ENST00000297435 CARMIL1Q5VZK9 1371 aa16.53■□□□□ 0.24
DEFA4-201ENST00000297435 GOLGA3Q08378 1498 aa16.53■□□□□ 0.24
DEFA4-201ENST00000297435 RAPGEF2Q9Y4G8 1499 aa16.5■□□□□ 0.23
DEFA4-201ENST00000297435 MAGI1Q96QZ7 1491 aaPredicted RBP16.49■□□□□ 0.23
DEFA4-201ENST00000297435 FHAD1B1AJZ9 1412 aa16.48■□□□□ 0.23
DEFA4-201ENST00000297435 LOC105371045A0A1W2PR82 267 aa16.48■□□□□ 0.23
DEFA4-201ENST00000297435 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
DEFA4-201ENST00000297435 UBTFP17480 764 aaKnown RBP16.45■□□□□ 0.22
DEFA4-201ENST00000297435 SNAPC4Q5SXM2 1469 aa16.45■□□□□ 0.22
DEFA4-201ENST00000297435 EHMT2Q96KQ7 1210 aa16.42■□□□□ 0.22
DEFA4-201ENST00000297435 SYNJ2O15056 1496 aa16.42■□□□□ 0.22
DEFA4-201ENST00000297435 TNIKQ9UKE5 1360 aa16.4■□□□□ 0.22
DEFA4-201ENST00000297435 CTTNBP2Q8WZ74 1663 aa16.4■□□□□ 0.22
DEFA4-201ENST00000297435 CHMP7Q8WUX9 453 aaPredicted RBP16.37■□□□□ 0.21
DEFA4-201ENST00000297435 GRIN2AQ12879 1464 aa16.35■□□□□ 0.21
DEFA4-201ENST00000297435 CHD1O14646 1710 aa16.35■□□□□ 0.21
DEFA4-201ENST00000297435 FBLN2P98095 1184 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms