RNA–Protein interactions for RNA: ENST00000295497.11

CHN1-201, Transcript of chimerin 1, humanhuman

TSL 1 (best) BASIC

Gene CHN1, Length 2,047 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHN1-201ENST00000295497 NISCHQ9Y2I1 1504 aa15.31■□□□□ 0.04
CHN1-201ENST00000295497 ABCC9O60706 1549 aa13.93□□□□□ -0.18
CHN1-201ENST00000295497 CCDC180Q9P1Z9 1646 aa13.77□□□□□ -0.2
CHN1-201ENST00000295497 RB1CC1Q8TDY2 1594 aa13.21□□□□□ -0.29
CHN1-201ENST00000295497 DNAJC5BQ9UF47 199 aa13.2□□□□□ -0.3
CHN1-201ENST00000295497 NACADO15069 1562 aa13.09□□□□□ -0.31
CHN1-201ENST00000295497 DCAF8L2P0C7V8 631 aa13.04□□□□□ -0.32
CHN1-201ENST00000295497 PABPN1Q86U42 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
CHN1-201ENST00000295497 MYO15BQ96JP2 1530 aa12.89□□□□□ -0.35
CHN1-201ENST00000295497 CHIC1Q5VXU3 224 aa12.82□□□□□ -0.36
CHN1-201ENST00000295497 UNC13AQ9UPW8 1703 aa12.81□□□□□ -0.36
CHN1-201ENST00000295497 BICRAQ9NZM4 1560 aa12.78□□□□□ -0.36
CHN1-201ENST00000295497 SHROOM4Q9ULL8 1493 aa12.69□□□□□ -0.38
CHN1-201ENST00000295497 DCAF1Q9Y4B6 1507 aa12.65□□□□□ -0.38
CHN1-201ENST00000295497 ZCCHC6Q5VYS8 1495 aaKnown RBP12.65□□□□□ -0.38
CHN1-201ENST00000295497 AEBP2Q6ZN18 517 aaPredicted RBP12.62□□□□□ -0.39
CHN1-201ENST00000295497 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
CHN1-201ENST00000295497 CC2D2AQ9P2K1 1620 aa12.56□□□□□ -0.4
CHN1-201ENST00000295497 SCRIBQ14160 1630 aa12.53□□□□□ -0.4
CHN1-201ENST00000295497 EIF4G1Q04637 1599 aaKnown RBP12.51□□□□□ -0.41
CHN1-201ENST00000295497 DNAJC5Q9H3Z4 198 aa12.28□□□□□ -0.44
CHN1-201ENST00000295497 CUX2O14529 1486 aa12.1□□□□□ -0.47
CHN1-201ENST00000295497 NCAPD3P42695 1498 aa12.1□□□□□ -0.47
CHN1-201ENST00000295497 ERCC6Q03468 1493 aa12.08□□□□□ -0.48
CHN1-201ENST00000295497 ATAD2BQ9ULI0 1458 aa12.03□□□□□ -0.48
CHN1-201ENST00000295497 SMARCA2P51531 1590 aa12□□□□□ -0.49
CHN1-201ENST00000295497 HMGXB3Q12766 1538 aa11.98□□□□□ -0.49
CHN1-201ENST00000295497 SMARCA4P51532 1647 aa11.95□□□□□ -0.5
CHN1-201ENST00000295497 BAZ1BQ9UIG0 1483 aaKnown RBP11.91□□□□□ -0.5
CHN1-201ENST00000295497 NESP48681 1621 aa11.91□□□□□ -0.5
CHN1-201ENST00000295497 BAZ1AQ9NRL2 1556 aaPredicted RBP11.91□□□□□ -0.5
CHN1-201ENST00000295497 PEG3Q9GZU2 1588 aa11.86□□□□□ -0.51
CHN1-201ENST00000295497 LAMC3Q9Y6N6 1575 aa11.84□□□□□ -0.51
CHN1-201ENST00000295497 PDS5BQ9NTI5 1447 aa11.82□□□□□ -0.52
CHN1-201ENST00000295497 THOC2Q8NI27 1593 aaKnown RBP11.8□□□□□ -0.52
CHN1-201ENST00000295497 MROH2BQ7Z745 1585 aa11.77□□□□□ -0.52
CHN1-201ENST00000295497 CADPSQ9ULU8 1353 aa11.75□□□□□ -0.53
CHN1-201ENST00000295497 KIF21AQ7Z4S6 1674 aa11.71□□□□□ -0.53
CHN1-201ENST00000295497 MRC2Q9UBG0 1479 aa11.69□□□□□ -0.54
CHN1-201ENST00000295497 TRIM41Q8WV44 630 aa11.67□□□□□ -0.54
CHN1-201ENST00000295497 WDR62O43379 1518 aa11.64□□□□□ -0.55
CHN1-201ENST00000295497 CEP164Q9UPV0 1460 aa11.61□□□□□ -0.55
CHN1-201ENST00000295497 WIZO95785 1651 aa11.6□□□□□ -0.55
CHN1-201ENST00000295497 FANCD2Q9BXW9 1451 aa11.59□□□□□ -0.55
CHN1-201ENST00000295497 OSCARQ8IYS5 282 aa11.57□□□□□ -0.56
CHN1-201ENST00000295497 CFTRP13569 1480 aa11.56□□□□□ -0.56
CHN1-201ENST00000295497 RSF1Q96T23 1441 aaPredicted RBP11.51□□□□□ -0.57
CHN1-201ENST00000295497 TOP2AP11388 1531 aaKnown RBP11.48□□□□□ -0.57
CHN1-201ENST00000295497 URB2Q14146 1524 aaKnown RBP11.47□□□□□ -0.57
CHN1-201ENST00000295497 IFT140Q96RY7 1462 aa11.4□□□□□ -0.59
CHN1-201ENST00000295497 CCDC88BA6NC98 1476 aa11.36□□□□□ -0.59
CHN1-201ENST00000295497 ZNF608Q9ULD9 1512 aaPredicted RBP11.35□□□□□ -0.59
CHN1-201ENST00000295497 ABCC8Q09428 1581 aa11.35□□□□□ -0.59
CHN1-201ENST00000295497 PRDM2Q13029 1718 aa11.35□□□□□ -0.59
CHN1-201ENST00000295497 RIMBP3CA6NJZ7 1639 aa11.34□□□□□ -0.59
CHN1-201ENST00000295497 RIMBP3BA6NNM3 1639 aa11.34□□□□□ -0.59
CHN1-201ENST00000295497 RIMBP3Q9UFD9 1639 aa11.34□□□□□ -0.59
CHN1-201ENST00000295497 TOPBP1Q92547 1522 aa11.33□□□□□ -0.6
CHN1-201ENST00000295497 PHF23Q9BUL5 403 aaPredicted RBP11.33□□□□□ -0.6
CHN1-201ENST00000295497 ARHGEF11O15085 1522 aa11.32□□□□□ -0.6
CHN1-201ENST00000295497 CYB5RLQ6IPT4 315 aa11.29□□□□□ -0.6
CHN1-201ENST00000295497 DNMBPQ6XZF7 1577 aa11.28□□□□□ -0.6
CHN1-201ENST00000295497 EIF4G3O43432 1585 aaKnown RBP11.27□□□□□ -0.61
CHN1-201ENST00000295497 AQRO60306 1485 aaKnown RBP eCLIP11.26□□□□□ -0.61
CHN1-201ENST00000295497 FBLN2P98095 1184 aa11.26□□□□□ -0.61
CHN1-201ENST00000295497 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
CHN1-201ENST00000295497 POLA1P09884 1462 aaPredicted RBP11.22□□□□□ -0.61
CHN1-201ENST00000295497 TARBP1Q13395 1621 aaKnown RBP11.21□□□□□ -0.61
CHN1-201ENST00000295497 SOGA1O94964 1423 aa11.19□□□□□ -0.62
CHN1-201ENST00000295497 ARAP1Q96P48 1450 aa11.18□□□□□ -0.62
CHN1-201ENST00000295497 CHD1O14646 1710 aa11.18□□□□□ -0.62
CHN1-201ENST00000295497 TDRD9Q8NDG6 1382 aaKnown RBP11.18□□□□□ -0.62
CHN1-201ENST00000295497 RAD54L2Q9Y4B4 1467 aa11.17□□□□□ -0.62
CHN1-201ENST00000295497 CHMP7Q8WUX9 453 aaPredicted RBP11.16□□□□□ -0.62
CHN1-201ENST00000295497 WDR97A6NE52 1622 aa11.14□□□□□ -0.63
CHN1-201ENST00000295497 SNAPC4Q5SXM2 1469 aa11.13□□□□□ -0.63
CHN1-201ENST00000295497 FGD5Q6ZNL6 1462 aa11.12□□□□□ -0.63
CHN1-201ENST00000295497 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
CHN1-201ENST00000295497 GRIN2BQ13224 1484 aa11.11□□□□□ -0.63
CHN1-201ENST00000295497 SYNJ1O43426 1573 aa11.1□□□□□ -0.63
CHN1-201ENST00000295497 CLASP1Q7Z460 1538 aa11.09□□□□□ -0.63
CHN1-201ENST00000295497 SYNJ2O15056 1496 aa11.09□□□□□ -0.63
CHN1-201ENST00000295497 CUX1P39880 1505 aa11.07□□□□□ -0.64
CHN1-201ENST00000295497 GAPVD1Q14C86 1478 aa11.04□□□□□ -0.64
CHN1-201ENST00000295497 ABCA10Q8WWZ4 1543 aa11□□□□□ -0.65
CHN1-201ENST00000295497 PBRM1Q86U86 1689 aa10.97□□□□□ -0.65
CHN1-201ENST00000295497 WRNQ14191 1432 aaPredicted RBP eCLIP10.96□□□□□ -0.65
CHN1-201ENST00000295497 ABCA5Q8WWZ7 1642 aa10.95□□□□□ -0.66
CHN1-201ENST00000295497 GRIN2AQ12879 1464 aa10.95□□□□□ -0.66
CHN1-201ENST00000295497 SUPT5HO00267 1087 aaKnown RBP10.92□□□□□ -0.66
CHN1-201ENST00000295497 NUP160Q12769 1436 aa10.92□□□□□ -0.66
CHN1-201ENST00000295497 FHAD1B1AJZ9 1412 aa10.91□□□□□ -0.66
CHN1-201ENST00000295497 ADAMTS12P58397 1594 aa10.89□□□□□ -0.67
CHN1-201ENST00000295497 CEP170Q5SW79 1584 aa10.89□□□□□ -0.67
CHN1-201ENST00000295497 ERCC6L2Q5T890 1561 aa10.88□□□□□ -0.67
CHN1-201ENST00000295497 ERICH3Q5RHP9 1530 aa10.87□□□□□ -0.67
CHN1-201ENST00000295497 TOP2BQ02880 1626 aa10.86□□□□□ -0.67
CHN1-201ENST00000295497 SHROOM2Q13796 1616 aa10.85□□□□□ -0.67
CHN1-201ENST00000295497 JPH4Q96JJ6 628 aa10.85□□□□□ -0.67
CHN1-201ENST00000295497 PRG4Q92954 1404 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms