RNA–Protein interactions for RNA: ENST00000295448.7

GNPDA2-201, Transcript of glucosamine-6-phosphate deaminase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GNPDA2, Length 1,930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPDA2-201ENST00000295448 AEBP2Q6ZN18 517 aaPredicted RBP23.52■■□□□ 1.36
GNPDA2-201ENST00000295448 NISCHQ9Y2I1 1504 aa23.15■■□□□ 1.3
GNPDA2-201ENST00000295448 CHIC1Q5VXU3 224 aa22.12■■□□□ 1.13
GNPDA2-201ENST00000295448 ABCC9O60706 1549 aa20.9■□□□□ 0.94
GNPDA2-201ENST00000295448 CCDC180Q9P1Z9 1646 aa20.8■□□□□ 0.92
GNPDA2-201ENST00000295448 SENP3Q9H4L4 574 aaPredicted RBP20.29■□□□□ 0.84
GNPDA2-201ENST00000295448 PHF23Q9BUL5 403 aaPredicted RBP19.88■□□□□ 0.77
GNPDA2-201ENST00000295448 RB1CC1Q8TDY2 1594 aa19.83■□□□□ 0.77
GNPDA2-201ENST00000295448 DNAJC5BQ9UF47 199 aa19.72■□□□□ 0.75
GNPDA2-201ENST00000295448 NACADO15069 1562 aa19.68■□□□□ 0.74
GNPDA2-201ENST00000295448 DCAF8L2P0C7V8 631 aa19.55■□□□□ 0.72
GNPDA2-201ENST00000295448 UNC13AQ9UPW8 1703 aa19.45■□□□□ 0.7
GNPDA2-201ENST00000295448 PABPN1Q86U42 306 aaKnown RBP eCLIP19.44■□□□□ 0.7
GNPDA2-201ENST00000295448 MYO15BQ96JP2 1530 aa19.39■□□□□ 0.69
GNPDA2-201ENST00000295448 BICRAQ9NZM4 1560 aa19.31■□□□□ 0.68
GNPDA2-201ENST00000295448 ZCCHC6Q5VYS8 1495 aaKnown RBP19.16■□□□□ 0.66
GNPDA2-201ENST00000295448 DCAF1Q9Y4B6 1507 aa19.1■□□□□ 0.65
GNPDA2-201ENST00000295448 SHROOM4Q9ULL8 1493 aa18.99■□□□□ 0.63
GNPDA2-201ENST00000295448 SCRIBQ14160 1630 aa18.95■□□□□ 0.62
GNPDA2-201ENST00000295448 FOXD1Q16676 465 aa18.9■□□□□ 0.62
GNPDA2-201ENST00000295448 CC2D2AQ9P2K1 1620 aa18.88■□□□□ 0.61
GNPDA2-201ENST00000295448 CECR2Q9BXF3 1484 aa18.82■□□□□ 0.6
GNPDA2-201ENST00000295448 EIF4G1Q04637 1599 aaKnown RBP18.81■□□□□ 0.6
GNPDA2-201ENST00000295448 POTEDQ86YR6 584 aa18.55■□□□□ 0.56
GNPDA2-201ENST00000295448 NCAPD3P42695 1498 aa18.18■□□□□ 0.5
GNPDA2-201ENST00000295448 DNAJC5Q9H3Z4 198 aa18.15■□□□□ 0.5
GNPDA2-201ENST00000295448 ATAD2BQ9ULI0 1458 aa18.11■□□□□ 0.49
GNPDA2-201ENST00000295448 SMARCA4P51532 1647 aa18.07■□□□□ 0.48
GNPDA2-201ENST00000295448 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
GNPDA2-201ENST00000295448 MSH5O43196 834 aa18.04■□□□□ 0.48
GNPDA2-201ENST00000295448 CUX2O14529 1486 aa18.03■□□□□ 0.48
GNPDA2-201ENST00000295448 HMGXB3Q12766 1538 aa18.03■□□□□ 0.48
GNPDA2-201ENST00000295448 ERCC6Q03468 1493 aa18.02■□□□□ 0.47
GNPDA2-201ENST00000295448 BAZ1AQ9NRL2 1556 aaPredicted RBP17.95■□□□□ 0.46
GNPDA2-201ENST00000295448 NESP48681 1621 aa17.94■□□□□ 0.46
GNPDA2-201ENST00000295448 BAZ1BQ9UIG0 1483 aaKnown RBP17.91■□□□□ 0.46
GNPDA2-201ENST00000295448 PEG3Q9GZU2 1588 aa17.9■□□□□ 0.46
GNPDA2-201ENST00000295448 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
GNPDA2-201ENST00000295448 LAMC3Q9Y6N6 1575 aa17.78■□□□□ 0.44
GNPDA2-201ENST00000295448 THOC2Q8NI27 1593 aaKnown RBP17.77■□□□□ 0.44
GNPDA2-201ENST00000295448 KIF21AQ7Z4S6 1674 aa17.71■□□□□ 0.43
GNPDA2-201ENST00000295448 PDS5BQ9NTI5 1447 aa17.67■□□□□ 0.42
GNPDA2-201ENST00000295448 WIZO95785 1651 aa17.63■□□□□ 0.41
GNPDA2-201ENST00000295448 CADPSQ9ULU8 1353 aa17.62■□□□□ 0.41
GNPDA2-201ENST00000295448 PIAS4Q8N2W9 510 aaPredicted RBP17.53■□□□□ 0.4
GNPDA2-201ENST00000295448 MRC2Q9UBG0 1479 aa17.53■□□□□ 0.4
GNPDA2-201ENST00000295448 WDR62O43379 1518 aa17.5■□□□□ 0.39
GNPDA2-201ENST00000295448 RSF1Q96T23 1441 aaPredicted RBP17.43■□□□□ 0.38
GNPDA2-201ENST00000295448 CEP164Q9UPV0 1460 aa17.43■□□□□ 0.38
GNPDA2-201ENST00000295448 FANCD2Q9BXW9 1451 aa17.42■□□□□ 0.38
GNPDA2-201ENST00000295448 CFTRP13569 1480 aa17.4■□□□□ 0.38
GNPDA2-201ENST00000295448 TOP2AP11388 1531 aaKnown RBP17.38■□□□□ 0.37
GNPDA2-201ENST00000295448 URB2Q14146 1524 aaKnown RBP17.3■□□□□ 0.36
GNPDA2-201ENST00000295448 TRIM41Q8WV44 630 aa17.29■□□□□ 0.36
GNPDA2-201ENST00000295448 PRDM2Q13029 1718 aa17.23■□□□□ 0.35
GNPDA2-201ENST00000295448 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
GNPDA2-201ENST00000295448 OSCARQ8IYS5 282 aa17.19■□□□□ 0.34
GNPDA2-201ENST00000295448 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
GNPDA2-201ENST00000295448 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
GNPDA2-201ENST00000295448 ZNF608Q9ULD9 1512 aaPredicted RBP17.1■□□□□ 0.33
GNPDA2-201ENST00000295448 IFT140Q96RY7 1462 aa17.09■□□□□ 0.33
GNPDA2-201ENST00000295448 TOPBP1Q92547 1522 aa17.08■□□□□ 0.33
GNPDA2-201ENST00000295448 ADRA2BP18089 450 aa17.07■□□□□ 0.32
GNPDA2-201ENST00000295448 ABCC8Q09428 1581 aa17.01■□□□□ 0.31
GNPDA2-201ENST00000295448 DNMBPQ6XZF7 1577 aa17.01■□□□□ 0.31
GNPDA2-201ENST00000295448 RIMBP3CA6NJZ7 1639 aa17■□□□□ 0.31
GNPDA2-201ENST00000295448 RIMBP3BA6NNM3 1639 aa17■□□□□ 0.31
GNPDA2-201ENST00000295448 RIMBP3Q9UFD9 1639 aa17■□□□□ 0.31
GNPDA2-201ENST00000295448 EIF4G3O43432 1585 aaKnown RBP16.99■□□□□ 0.31
GNPDA2-201ENST00000295448 TARBP1Q13395 1621 aaKnown RBP16.96■□□□□ 0.31
GNPDA2-201ENST00000295448 ARHGEF11O15085 1522 aa16.93■□□□□ 0.3
GNPDA2-201ENST00000295448 AQRO60306 1485 aaKnown RBP eCLIP16.93■□□□□ 0.3
GNPDA2-201ENST00000295448 POLA1P09884 1462 aaPredicted RBP16.91■□□□□ 0.3
GNPDA2-201ENST00000295448 CHD1O14646 1710 aa16.89■□□□□ 0.3
GNPDA2-201ENST00000295448 RAD54L2Q9Y4B4 1467 aa16.86■□□□□ 0.29
GNPDA2-201ENST00000295448 SOGA1O94964 1423 aa16.82■□□□□ 0.28
GNPDA2-201ENST00000295448 TDRD9Q8NDG6 1382 aaKnown RBP16.8■□□□□ 0.28
GNPDA2-201ENST00000295448 FBLN2P98095 1184 aa16.8■□□□□ 0.28
GNPDA2-201ENST00000295448 CYB5RLQ6IPT4 315 aa16.8■□□□□ 0.28
GNPDA2-201ENST00000295448 FGD5Q6ZNL6 1462 aa16.78■□□□□ 0.28
GNPDA2-201ENST00000295448 ARAP1Q96P48 1450 aa16.77■□□□□ 0.28
GNPDA2-201ENST00000295448 CUX1P39880 1505 aa16.77■□□□□ 0.27
GNPDA2-201ENST00000295448 WDR97A6NE52 1622 aa16.74■□□□□ 0.27
GNPDA2-201ENST00000295448 SNAPC4Q5SXM2 1469 aa16.74■□□□□ 0.27
GNPDA2-201ENST00000295448 CLASP1Q7Z460 1538 aa16.7■□□□□ 0.26
GNPDA2-201ENST00000295448 MAGI1Q96QZ7 1491 aaPredicted RBP16.68■□□□□ 0.26
GNPDA2-201ENST00000295448 GRIN2BQ13224 1484 aa16.68■□□□□ 0.26
GNPDA2-201ENST00000295448 CHMP7Q8WUX9 453 aaPredicted RBP16.67■□□□□ 0.26
GNPDA2-201ENST00000295448 SYNJ1O43426 1573 aa16.65■□□□□ 0.26
GNPDA2-201ENST00000295448 SYNJ2O15056 1496 aa16.64■□□□□ 0.25
GNPDA2-201ENST00000295448 TRHP20396 242 aaPredicted RBP16.63■□□□□ 0.25
GNPDA2-201ENST00000295448 PBRM1Q86U86 1689 aa16.62■□□□□ 0.25
GNPDA2-201ENST00000295448 GAPVD1Q14C86 1478 aa16.61■□□□□ 0.25
GNPDA2-201ENST00000295448 ABCA10Q8WWZ4 1543 aa16.59■□□□□ 0.25
GNPDA2-201ENST00000295448 ABCA5Q8WWZ7 1642 aa16.58■□□□□ 0.24
GNPDA2-201ENST00000295448 SUPT5HO00267 1087 aaKnown RBP16.57■□□□□ 0.24
GNPDA2-201ENST00000295448 WRNQ14191 1432 aaPredicted RBP eCLIP16.49■□□□□ 0.23
GNPDA2-201ENST00000295448 BIVM-ERCC5R4GMW8 1640 aa16.47■□□□□ 0.23
GNPDA2-201ENST00000295448 GRIN2AQ12879 1464 aa16.47■□□□□ 0.23
GNPDA2-201ENST00000295448 TOP2BQ02880 1626 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms