RNA–Protein interactions for RNA: ENST00000294737.11

DENND1B-202, Transcript of DENN domain containing 1B, humanhuman

TSL 2

Gene DENND1B, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1B-202ENST00000294737 NISCHQ9Y2I1 1504 aa40.06■■■■■ 4
DENND1B-202ENST00000294737 CCDC180Q9P1Z9 1646 aa34.59■■■■□ 3.13
DENND1B-202ENST00000294737 ZCCHC6Q5VYS8 1495 aaKnown RBP33.72■■■□□ 2.99
DENND1B-202ENST00000294737 SHROOM4Q9ULL8 1493 aa33.32■■■□□ 2.92
DENND1B-202ENST00000294737 DCAF8L2P0C7V8 631 aa33.31■■■□□ 2.92
DENND1B-202ENST00000294737 DCAF1Q9Y4B6 1507 aa32.97■■■□□ 2.87
DENND1B-202ENST00000294737 ABCC9O60706 1549 aa32.62■■■□□ 2.81
DENND1B-202ENST00000294737 MYO15BQ96JP2 1530 aa32.38■■■□□ 2.77
DENND1B-202ENST00000294737 SUPT5HO00267 1087 aaKnown RBP32.26■■■□□ 2.76
DENND1B-202ENST00000294737 NACADO15069 1562 aa32.16■■■□□ 2.74
DENND1B-202ENST00000294737 SCRIBQ14160 1630 aa32.12■■■□□ 2.73
DENND1B-202ENST00000294737 RB1CC1Q8TDY2 1594 aa31.82■■■□□ 2.69
DENND1B-202ENST00000294737 RSF1Q96T23 1441 aaPredicted RBP31.31■■■□□ 2.6
DENND1B-202ENST00000294737 UNC13AQ9UPW8 1703 aa31.28■■■□□ 2.6
DENND1B-202ENST00000294737 CECR2Q9BXF3 1484 aa31.23■■■□□ 2.59
DENND1B-202ENST00000294737 MROH2BQ7Z745 1585 aa31.05■■■□□ 2.56
DENND1B-202ENST00000294737 CHIC1Q5VXU3 224 aa30.99■■■□□ 2.55
DENND1B-202ENST00000294737 PABPN1Q86U42 306 aaKnown RBP eCLIP30.96■■■□□ 2.55
DENND1B-202ENST00000294737 BICRAQ9NZM4 1560 aa30.91■■■□□ 2.54
DENND1B-202ENST00000294737 BAZ1AQ9NRL2 1556 aaPredicted RBP30.87■■■□□ 2.53
DENND1B-202ENST00000294737 WIZO95785 1651 aa30.84■■■□□ 2.53
DENND1B-202ENST00000294737 SMARCA4P51532 1647 aa30.71■■■□□ 2.51
DENND1B-202ENST00000294737 TOP2AP11388 1531 aaKnown RBP30.41■■■□□ 2.46
DENND1B-202ENST00000294737 PEG3Q9GZU2 1588 aa30.21■■■□□ 2.43
DENND1B-202ENST00000294737 CCDC88BA6NC98 1476 aa30.21■■■□□ 2.43
DENND1B-202ENST00000294737 TRIM41Q8WV44 630 aa30.2■■■□□ 2.42
DENND1B-202ENST00000294737 SMARCA2P51531 1590 aa30.19■■■□□ 2.42
DENND1B-202ENST00000294737 ATAD2BQ9ULI0 1458 aa30.12■■■□□ 2.41
DENND1B-202ENST00000294737 EIF4G1Q04637 1599 aaKnown RBP30.05■■■□□ 2.4
DENND1B-202ENST00000294737 BAZ1BQ9UIG0 1483 aaKnown RBP29.99■■■□□ 2.39
DENND1B-202ENST00000294737 LOC105371045A0A1W2PR82 267 aa29.96■■■□□ 2.39
DENND1B-202ENST00000294737 FAM9AQ8IZU1 332 aaPredicted RBP29.82■■■□□ 2.36
DENND1B-202ENST00000294737 ABCC8Q09428 1581 aa29.79■■■□□ 2.36
DENND1B-202ENST00000294737 NCAPD3P42695 1498 aa29.72■■■□□ 2.35
DENND1B-202ENST00000294737 HMGXB3Q12766 1538 aa29.67■■■□□ 2.34
DENND1B-202ENST00000294737 EHMT2Q96KQ7 1210 aa29.52■■■□□ 2.32
DENND1B-202ENST00000294737 WRNQ14191 1432 aaPredicted RBP eCLIP29.46■■■□□ 2.31
DENND1B-202ENST00000294737 CC2D2AQ9P2K1 1620 aa29.44■■■□□ 2.3
DENND1B-202ENST00000294737 SYNJ1O43426 1573 aa29.33■■■□□ 2.29
DENND1B-202ENST00000294737 SOGA1O94964 1423 aa29.32■■■□□ 2.28
DENND1B-202ENST00000294737 CFTRP13569 1480 aa29.22■■■□□ 2.27
DENND1B-202ENST00000294737 RUSC2Q8N2Y8 1516 aa29.21■■■□□ 2.27
DENND1B-202ENST00000294737 EEA1Q15075 1411 aa29.14■■■□□ 2.26
DENND1B-202ENST00000294737 CSRNP3Q8WYN3 585 aa29.12■■■□□ 2.25
DENND1B-202ENST00000294737 TOP2BQ02880 1626 aa29.1■■■□□ 2.25
DENND1B-202ENST00000294737 CADPSQ9ULU8 1353 aa29.06■■■□□ 2.24
DENND1B-202ENST00000294737 PCGF6Q9BYE7 350 aa29.04■■■□□ 2.24
DENND1B-202ENST00000294737 BIVM-ERCC5R4GMW8 1640 aa29.03■■■□□ 2.24
DENND1B-202ENST00000294737 PRDM2Q13029 1718 aa29.01■■■□□ 2.24
DENND1B-202ENST00000294737 CUX1P39880 1505 aa28.98■■■□□ 2.23
DENND1B-202ENST00000294737 UBTFP17480 764 aaKnown RBP28.88■■■□□ 2.21
DENND1B-202ENST00000294737 GOLGA3Q08378 1498 aa28.86■■■□□ 2.21
DENND1B-202ENST00000294737 TNIKQ9UKE5 1360 aa28.85■■■□□ 2.21
DENND1B-202ENST00000294737 CEP164Q9UPV0 1460 aa28.8■■■□□ 2.2
DENND1B-202ENST00000294737 DNAJC5BQ9UF47 199 aa28.79■■■□□ 2.2
DENND1B-202ENST00000294737 CEP162Q5TB80 1403 aa28.79■■■□□ 2.2
DENND1B-202ENST00000294737 TRIM26Q12899 539 aaPredicted RBP28.79■■■□□ 2.2
DENND1B-202ENST00000294737 NESP48681 1621 aa28.78■■■□□ 2.2
DENND1B-202ENST00000294737 KIF21BO75037 1637 aa28.77■■■□□ 2.2
DENND1B-202ENST00000294737 FANCD2Q9BXW9 1451 aa28.77■■■□□ 2.2
DENND1B-202ENST00000294737 RAPGEF2Q9Y4G8 1499 aa28.67■■■□□ 2.18
DENND1B-202ENST00000294737 KIF27Q86VH2 1401 aa28.65■■■□□ 2.18
DENND1B-202ENST00000294737 LAMC3Q9Y6N6 1575 aa28.63■■■□□ 2.17
DENND1B-202ENST00000294737 PPARGC1BQ86YN6 1023 aaKnown RBP28.62■■■□□ 2.17
DENND1B-202ENST00000294737 FGD5Q6ZNL6 1462 aa28.61■■■□□ 2.17
DENND1B-202ENST00000294737 PRXQ9BXM0 1461 aa28.54■■■□□ 2.16
DENND1B-202ENST00000294737 CUX2O14529 1486 aa28.53■■■□□ 2.16
DENND1B-202ENST00000294737 DNMBPQ6XZF7 1577 aa28.51■■■□□ 2.16
DENND1B-202ENST00000294737 TOPBP1Q92547 1522 aa28.49■■■□□ 2.15
DENND1B-202ENST00000294737 ERICH3Q5RHP9 1530 aa28.48■■■□□ 2.15
DENND1B-202ENST00000294737 CLIP1P30622 1438 aa28.46■■■□□ 2.15
DENND1B-202ENST00000294737 RANGAP1P46060 587 aaPredicted RBP28.46■■■□□ 2.15
DENND1B-202ENST00000294737 PDS5BQ9NTI5 1447 aa28.45■■■□□ 2.14
DENND1B-202ENST00000294737 HRCP23327 699 aa28.44■■■□□ 2.14
DENND1B-202ENST00000294737 POLA1P09884 1462 aaPredicted RBP28.4■■■□□ 2.14
DENND1B-202ENST00000294737 RAD54L2Q9Y4B4 1467 aa28.39■■■□□ 2.14
DENND1B-202ENST00000294737 IGF1RP08069 1367 aa28.39■■■□□ 2.14
DENND1B-202ENST00000294737 URB2Q14146 1524 aaKnown RBP28.39■■■□□ 2.14
DENND1B-202ENST00000294737 KIF21AQ7Z4S6 1674 aa28.36■■■□□ 2.13
DENND1B-202ENST00000294737 TTBK1Q5TCY1 1321 aaPredicted RBP28.33■■■□□ 2.13
DENND1B-202ENST00000294737 ABCA10Q8WWZ4 1543 aa28.29■■■□□ 2.12
DENND1B-202ENST00000294737 CARMIL1Q5VZK9 1371 aa28.27■■■□□ 2.12
DENND1B-202ENST00000294737 VPS8Q8N3P4 1428 aa28.23■■■□□ 2.11
DENND1B-202ENST00000294737 WDR97A6NE52 1622 aa28.13■■■□□ 2.09
DENND1B-202ENST00000294737 ARAP1Q96P48 1450 aa28.11■■■□□ 2.09
DENND1B-202ENST00000294737 TDRD9Q8NDG6 1382 aaKnown RBP28.1■■■□□ 2.09
DENND1B-202ENST00000294737 APLP2Q06481 763 aa28.07■■■□□ 2.08
DENND1B-202ENST00000294737 MRC2Q9UBG0 1479 aa28.05■■■□□ 2.08
DENND1B-202ENST00000294737 ARHGAP35Q9NRY4 1499 aa28.03■■■□□ 2.08
DENND1B-202ENST00000294737 ABCA5Q8WWZ7 1642 aa28.02■■■□□ 2.08
DENND1B-202ENST00000294737 CUL7Q14999 1698 aa28.02■■■□□ 2.08
DENND1B-202ENST00000294737 GAPVD1Q14C86 1478 aa28.01■■■□□ 2.07
DENND1B-202ENST00000294737 TARBP1Q13395 1621 aaKnown RBP27.99■■■□□ 2.07
DENND1B-202ENST00000294737 ERCC6Q03468 1493 aa27.89■■■□□ 2.05
DENND1B-202ENST00000294737 WDR62O43379 1518 aa27.86■■■□□ 2.05
DENND1B-202ENST00000294737 AQRO60306 1485 aaKnown RBP eCLIP27.84■■■□□ 2.05
DENND1B-202ENST00000294737 P3H3Q8IVL6 736 aa27.81■■■□□ 2.04
DENND1B-202ENST00000294737 CTTNBP2Q8WZ74 1663 aa27.81■■■□□ 2.04
DENND1B-202ENST00000294737 KANK4Q5T7N3 995 aaPredicted RBP27.78■■■□□ 2.04
DENND1B-202ENST00000294737 PBRM1Q86U86 1689 aa27.78■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms