RNA–Protein interactions for RNA: ENST00000274532.6

TIMD4-201, Transcript of T cell immunoglobulin and mucin domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TIMD4, Length 1,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4-201ENST00000274532 NISCHQ9Y2I1 1504 aa20.44■□□□□ 0.86
TIMD4-201ENST00000274532 AEBP2Q6ZN18 517 aaPredicted RBP18.87■□□□□ 0.61
TIMD4-201ENST00000274532 CCDC180Q9P1Z9 1646 aa18.36■□□□□ 0.53
TIMD4-201ENST00000274532 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
TIMD4-201ENST00000274532 ABCC9O60706 1549 aa17.88■□□□□ 0.45
TIMD4-201ENST00000274532 RB1CC1Q8TDY2 1594 aa17.22■□□□□ 0.35
TIMD4-201ENST00000274532 NACADO15069 1562 aa17.17■□□□□ 0.34
TIMD4-201ENST00000274532 ZCCHC6Q5VYS8 1495 aaKnown RBP17.07■□□□□ 0.32
TIMD4-201ENST00000274532 MYO15BQ96JP2 1530 aa17.02■□□□□ 0.32
TIMD4-201ENST00000274532 UNC13AQ9UPW8 1703 aa17■□□□□ 0.31
TIMD4-201ENST00000274532 POTEDQ86YR6 584 aa16.96■□□□□ 0.31
TIMD4-201ENST00000274532 DCAF1Q9Y4B6 1507 aa16.94■□□□□ 0.3
TIMD4-201ENST00000274532 DCAF8L2P0C7V8 631 aa16.85■□□□□ 0.29
TIMD4-201ENST00000274532 BICRAQ9NZM4 1560 aa16.75■□□□□ 0.27
TIMD4-201ENST00000274532 SCRIBQ14160 1630 aa16.69■□□□□ 0.26
TIMD4-201ENST00000274532 PABPN1Q86U42 306 aaKnown RBP eCLIP16.56■□□□□ 0.24
TIMD4-201ENST00000274532 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
TIMD4-201ENST00000274532 DNAJC5BQ9UF47 199 aa16.36■□□□□ 0.21
TIMD4-201ENST00000274532 EIF4G1Q04637 1599 aaKnown RBP16.29■□□□□ 0.2
TIMD4-201ENST00000274532 CC2D2AQ9P2K1 1620 aa16.24■□□□□ 0.19
TIMD4-201ENST00000274532 SENP3Q9H4L4 574 aaPredicted RBP16.1■□□□□ 0.17
TIMD4-201ENST00000274532 CECR2Q9BXF3 1484 aa16.07■□□□□ 0.16
TIMD4-201ENST00000274532 SMARCA4P51532 1647 aa15.96■□□□□ 0.15
TIMD4-201ENST00000274532 PHF23Q9BUL5 403 aaPredicted RBP15.88■□□□□ 0.13
TIMD4-201ENST00000274532 BAZ1AQ9NRL2 1556 aaPredicted RBP15.88■□□□□ 0.13
TIMD4-201ENST00000274532 SMARCA2P51531 1590 aa15.82■□□□□ 0.12
TIMD4-201ENST00000274532 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
TIMD4-201ENST00000274532 PEG3Q9GZU2 1588 aa15.8■□□□□ 0.12
TIMD4-201ENST00000274532 ATAD2BQ9ULI0 1458 aa15.79■□□□□ 0.12
TIMD4-201ENST00000274532 NCAPD3P42695 1498 aa15.77■□□□□ 0.11
TIMD4-201ENST00000274532 MROH2BQ7Z745 1585 aa15.76■□□□□ 0.11
TIMD4-201ENST00000274532 BAZ1BQ9UIG0 1483 aaKnown RBP15.68■□□□□ 0.1
TIMD4-201ENST00000274532 WIZO95785 1651 aa15.64■□□□□ 0.09
TIMD4-201ENST00000274532 RSF1Q96T23 1441 aaPredicted RBP15.48■□□□□ 0.07
TIMD4-201ENST00000274532 NESP48681 1621 aa15.47■□□□□ 0.07
TIMD4-201ENST00000274532 TOP2AP11388 1531 aaKnown RBP15.47■□□□□ 0.07
TIMD4-201ENST00000274532 LAMC3Q9Y6N6 1575 aa15.46■□□□□ 0.06
TIMD4-201ENST00000274532 KIF21AQ7Z4S6 1674 aa15.42■□□□□ 0.06
TIMD4-201ENST00000274532 ERCC6Q03468 1493 aa15.41■□□□□ 0.06
TIMD4-201ENST00000274532 THOC2Q8NI27 1593 aaKnown RBP15.38■□□□□ 0.05
TIMD4-201ENST00000274532 PRDM2Q13029 1718 aa15.35■□□□□ 0.05
TIMD4-201ENST00000274532 CUX2O14529 1486 aa15.3■□□□□ 0.04
TIMD4-201ENST00000274532 CADPSQ9ULU8 1353 aa15.26■□□□□ 0.03
TIMD4-201ENST00000274532 PDS5BQ9NTI5 1447 aa15.24■□□□□ 0.03
TIMD4-201ENST00000274532 CFTRP13569 1480 aa15.22■□□□□ 0.03
TIMD4-201ENST00000274532 WDR62O43379 1518 aa15.19■□□□□ 0.02
TIMD4-201ENST00000274532 CCDC88BA6NC98 1476 aa15.18■□□□□ 0.02
TIMD4-201ENST00000274532 CEP164Q9UPV0 1460 aa15.18■□□□□ 0.02
TIMD4-201ENST00000274532 MRC2Q9UBG0 1479 aa15.17■□□□□ 0.02
TIMD4-201ENST00000274532 FANCD2Q9BXW9 1451 aa15.17■□□□□ 0.02
TIMD4-201ENST00000274532 URB2Q14146 1524 aaKnown RBP15.05■□□□□ -0
TIMD4-201ENST00000274532 FOXD1Q16676 465 aa15.02■□□□□ -0
TIMD4-201ENST00000274532 DNMBPQ6XZF7 1577 aa14.96□□□□□ -0.01
TIMD4-201ENST00000274532 TOPBP1Q92547 1522 aa14.94□□□□□ -0.02
TIMD4-201ENST00000274532 SUPT5HO00267 1087 aaKnown RBP14.89□□□□□ -0.03
TIMD4-201ENST00000274532 ABCC8Q09428 1581 aa14.86□□□□□ -0.03
TIMD4-201ENST00000274532 EIF4G3O43432 1585 aaKnown RBP14.85□□□□□ -0.03
TIMD4-201ENST00000274532 TARBP1Q13395 1621 aaKnown RBP14.84□□□□□ -0.03
TIMD4-201ENST00000274532 IFT140Q96RY7 1462 aa14.83□□□□□ -0.04
TIMD4-201ENST00000274532 CUX1P39880 1505 aa14.82□□□□□ -0.04
TIMD4-201ENST00000274532 WDR97A6NE52 1622 aa14.81□□□□□ -0.04
TIMD4-201ENST00000274532 POLA1P09884 1462 aaPredicted RBP14.8□□□□□ -0.04
TIMD4-201ENST00000274532 ZNF608Q9ULD9 1512 aaPredicted RBP14.79□□□□□ -0.04
TIMD4-201ENST00000274532 DNAJC5Q9H3Z4 198 aa14.76□□□□□ -0.05
TIMD4-201ENST00000274532 FGD5Q6ZNL6 1462 aa14.76□□□□□ -0.05
TIMD4-201ENST00000274532 BIVM-ERCC5R4GMW8 1640 aa14.74□□□□□ -0.05
TIMD4-201ENST00000274532 CHD1O14646 1710 aa14.71□□□□□ -0.05
TIMD4-201ENST00000274532 RAD54L2Q9Y4B4 1467 aa14.7□□□□□ -0.06
TIMD4-201ENST00000274532 SYNJ1O43426 1573 aa14.7□□□□□ -0.06
TIMD4-201ENST00000274532 TOP2BQ02880 1626 aa14.69□□□□□ -0.06
TIMD4-201ENST00000274532 PBRM1Q86U86 1689 aa14.69□□□□□ -0.06
TIMD4-201ENST00000274532 ABCA5Q8WWZ7 1642 aa14.66□□□□□ -0.06
TIMD4-201ENST00000274532 SOGA1O94964 1423 aa14.64□□□□□ -0.07
TIMD4-201ENST00000274532 AQRO60306 1485 aaKnown RBP eCLIP14.63□□□□□ -0.07
TIMD4-201ENST00000274532 WRNQ14191 1432 aaPredicted RBP eCLIP14.61□□□□□ -0.07
TIMD4-201ENST00000274532 MSH5O43196 834 aa14.6□□□□□ -0.07
TIMD4-201ENST00000274532 ABCA10Q8WWZ4 1543 aa14.6□□□□□ -0.07
TIMD4-201ENST00000274532 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
TIMD4-201ENST00000274532 TDRD9Q8NDG6 1382 aaKnown RBP14.56□□□□□ -0.08
TIMD4-201ENST00000274532 MAGI1Q96QZ7 1491 aaPredicted RBP14.55□□□□□ -0.08
TIMD4-201ENST00000274532 GRIN2BQ13224 1484 aa14.54□□□□□ -0.08
TIMD4-201ENST00000274532 ADAMTS12P58397 1594 aa14.53□□□□□ -0.08
TIMD4-201ENST00000274532 GAPVD1Q14C86 1478 aa14.52□□□□□ -0.08
TIMD4-201ENST00000274532 RIMBP3CA6NJZ7 1639 aa14.5□□□□□ -0.09
TIMD4-201ENST00000274532 RIMBP3BA6NNM3 1639 aa14.5□□□□□ -0.09
TIMD4-201ENST00000274532 RIMBP3Q9UFD9 1639 aa14.5□□□□□ -0.09
TIMD4-201ENST00000274532 SYNJ2O15056 1496 aa14.48□□□□□ -0.09
TIMD4-201ENST00000274532 CLASP1Q7Z460 1538 aa14.47□□□□□ -0.09
TIMD4-201ENST00000274532 PLPPR3Q6T4P5 718 aa14.47□□□□□ -0.09
TIMD4-201ENST00000274532 OSCARQ8IYS5 282 aa14.46□□□□□ -0.1
TIMD4-201ENST00000274532 ARHGEF11O15085 1522 aa14.45□□□□□ -0.1
TIMD4-201ENST00000274532 ERICH3Q5RHP9 1530 aa14.44□□□□□ -0.1
TIMD4-201ENST00000274532 GRIN2AQ12879 1464 aa14.4□□□□□ -0.1
TIMD4-201ENST00000274532 CEP170Q5SW79 1584 aa14.38□□□□□ -0.11
TIMD4-201ENST00000274532 CUL7Q14999 1698 aa14.36□□□□□ -0.11
TIMD4-201ENST00000274532 FBLN2P98095 1184 aa14.36□□□□□ -0.11
TIMD4-201ENST00000274532 FHAD1B1AJZ9 1412 aa14.34□□□□□ -0.11
TIMD4-201ENST00000274532 RUSC2Q8N2Y8 1516 aa14.33□□□□□ -0.12
TIMD4-201ENST00000274532 ARAP1Q96P48 1450 aa14.32□□□□□ -0.12
TIMD4-201ENST00000274532 SHROOM2Q13796 1616 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms