RNA–Protein interactions for RNA: ENST00000266775.13

TDG-201, Transcript of thymine DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDG, Length 1,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDG-201ENST00000266775 NISCHQ9Y2I1 1504 aa28.05■■■□□ 2.08
TDG-201ENST00000266775 ABCC9O60706 1549 aa25.38■■□□□ 1.65
TDG-201ENST00000266775 CCDC180Q9P1Z9 1646 aa25.3■■□□□ 1.64
TDG-201ENST00000266775 RB1CC1Q8TDY2 1594 aa24.1■■□□□ 1.45
TDG-201ENST00000266775 DNAJC5BQ9UF47 199 aa23.98■■□□□ 1.43
TDG-201ENST00000266775 NACADO15069 1562 aa23.91■■□□□ 1.42
TDG-201ENST00000266775 UNC13AQ9UPW8 1703 aa23.67■■□□□ 1.38
TDG-201ENST00000266775 DCAF8L2P0C7V8 631 aa23.6■■□□□ 1.37
TDG-201ENST00000266775 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
TDG-201ENST00000266775 MYO15BQ96JP2 1530 aa23.55■■□□□ 1.36
TDG-201ENST00000266775 BICRAQ9NZM4 1560 aa23.47■■□□□ 1.35
TDG-201ENST00000266775 ZCCHC6Q5VYS8 1495 aaKnown RBP23.23■■□□□ 1.31
TDG-201ENST00000266775 DCAF1Q9Y4B6 1507 aa23.18■■□□□ 1.3
TDG-201ENST00000266775 SHROOM4Q9ULL8 1493 aa23.1■■□□□ 1.29
TDG-201ENST00000266775 SCRIBQ14160 1630 aa22.98■■□□□ 1.27
TDG-201ENST00000266775 CC2D2AQ9P2K1 1620 aa22.96■■□□□ 1.27
TDG-201ENST00000266775 AEBP2Q6ZN18 517 aaPredicted RBP22.96■■□□□ 1.27
TDG-201ENST00000266775 CECR2Q9BXF3 1484 aa22.88■■□□□ 1.25
TDG-201ENST00000266775 EIF4G1Q04637 1599 aaKnown RBP22.87■■□□□ 1.25
TDG-201ENST00000266775 CHIC1Q5VXU3 224 aa22.27■■□□□ 1.16
TDG-201ENST00000266775 DNAJC5Q9H3Z4 198 aa22.12■■□□□ 1.13
TDG-201ENST00000266775 NCAPD3P42695 1498 aa22.07■■□□□ 1.12
TDG-201ENST00000266775 ATAD2BQ9ULI0 1458 aa21.98■■□□□ 1.11
TDG-201ENST00000266775 CUX2O14529 1486 aa21.97■■□□□ 1.11
TDG-201ENST00000266775 SMARCA4P51532 1647 aa21.93■■□□□ 1.1
TDG-201ENST00000266775 HMGXB3Q12766 1538 aa21.91■■□□□ 1.1
TDG-201ENST00000266775 SMARCA2P51531 1590 aa21.9■■□□□ 1.1
TDG-201ENST00000266775 ERCC6Q03468 1493 aa21.89■■□□□ 1.1
TDG-201ENST00000266775 NESP48681 1621 aa21.77■■□□□ 1.08
TDG-201ENST00000266775 BAZ1AQ9NRL2 1556 aaPredicted RBP21.77■■□□□ 1.08
TDG-201ENST00000266775 PEG3Q9GZU2 1588 aa21.75■■□□□ 1.07
TDG-201ENST00000266775 BAZ1BQ9UIG0 1483 aaKnown RBP21.73■■□□□ 1.07
TDG-201ENST00000266775 THOC2Q8NI27 1593 aaKnown RBP21.64■■□□□ 1.05
TDG-201ENST00000266775 MROH2BQ7Z745 1585 aa21.61■■□□□ 1.05
TDG-201ENST00000266775 LAMC3Q9Y6N6 1575 aa21.61■■□□□ 1.05
TDG-201ENST00000266775 KIF21AQ7Z4S6 1674 aa21.54■■□□□ 1.04
TDG-201ENST00000266775 PDS5BQ9NTI5 1447 aa21.44■■□□□ 1.02
TDG-201ENST00000266775 CADPSQ9ULU8 1353 aa21.37■■□□□ 1.01
TDG-201ENST00000266775 WIZO95785 1651 aa21.36■■□□□ 1.01
TDG-201ENST00000266775 MRC2Q9UBG0 1479 aa21.3■■□□□ 1
TDG-201ENST00000266775 WDR62O43379 1518 aa21.28■■□□□ 1
TDG-201ENST00000266775 CEP164Q9UPV0 1460 aa21.17■□□□□ 0.98
TDG-201ENST00000266775 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
TDG-201ENST00000266775 CFTRP13569 1480 aa21.11■□□□□ 0.97
TDG-201ENST00000266775 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.97
TDG-201ENST00000266775 TOP2AP11388 1531 aaKnown RBP21.07■□□□□ 0.96
TDG-201ENST00000266775 TRIM41Q8WV44 630 aa21.02■□□□□ 0.96
TDG-201ENST00000266775 URB2Q14146 1524 aaKnown RBP21■□□□□ 0.95
TDG-201ENST00000266775 PRDM2Q13029 1718 aa20.98■□□□□ 0.95
TDG-201ENST00000266775 OSCARQ8IYS5 282 aa20.86■□□□□ 0.93
TDG-201ENST00000266775 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
TDG-201ENST00000266775 ZNF608Q9ULD9 1512 aaPredicted RBP20.76■□□□□ 0.91
TDG-201ENST00000266775 IFT140Q96RY7 1462 aa20.75■□□□□ 0.91
TDG-201ENST00000266775 TOPBP1Q92547 1522 aa20.74■□□□□ 0.91
TDG-201ENST00000266775 RIMBP3CA6NJZ7 1639 aa20.71■□□□□ 0.91
TDG-201ENST00000266775 RIMBP3BA6NNM3 1639 aa20.71■□□□□ 0.91
TDG-201ENST00000266775 RIMBP3Q9UFD9 1639 aa20.71■□□□□ 0.91
TDG-201ENST00000266775 EIF4G3O43432 1585 aaKnown RBP20.65■□□□□ 0.9
TDG-201ENST00000266775 ABCC8Q09428 1581 aa20.65■□□□□ 0.9
TDG-201ENST00000266775 DNMBPQ6XZF7 1577 aa20.65■□□□□ 0.9
TDG-201ENST00000266775 ARHGEF11O15085 1522 aa20.6■□□□□ 0.89
TDG-201ENST00000266775 TARBP1Q13395 1621 aaKnown RBP20.59■□□□□ 0.89
TDG-201ENST00000266775 CHD1O14646 1710 aa20.56■□□□□ 0.88
TDG-201ENST00000266775 AQRO60306 1485 aaKnown RBP eCLIP20.52■□□□□ 0.874e-6■■■■■ 31
TDG-201ENST00000266775 POLA1P09884 1462 aaPredicted RBP20.5■□□□□ 0.87
TDG-201ENST00000266775 RAD54L2Q9Y4B4 1467 aa20.42■□□□□ 0.86
TDG-201ENST00000266775 ARAP1Q96P48 1450 aa20.4■□□□□ 0.86
TDG-201ENST00000266775 CYB5RLQ6IPT4 315 aa20.38■□□□□ 0.85
TDG-201ENST00000266775 SOGA1O94964 1423 aa20.37■□□□□ 0.85
TDG-201ENST00000266775 WDR97A6NE52 1622 aa20.36■□□□□ 0.85
TDG-201ENST00000266775 SUPT5HO00267 1087 aaKnown RBP20.35■□□□□ 0.85
TDG-201ENST00000266775 FGD5Q6ZNL6 1462 aa20.35■□□□□ 0.85
TDG-201ENST00000266775 TDRD9Q8NDG6 1382 aaKnown RBP20.34■□□□□ 0.85
TDG-201ENST00000266775 FBLN2P98095 1184 aa20.34■□□□□ 0.85
TDG-201ENST00000266775 CUX1P39880 1505 aa20.32■□□□□ 0.84
TDG-201ENST00000266775 SNAPC4Q5SXM2 1469 aa20.32■□□□□ 0.84
TDG-201ENST00000266775 CLASP1Q7Z460 1538 aa20.31■□□□□ 0.84
TDG-201ENST00000266775 MAGI1Q96QZ7 1491 aaPredicted RBP20.27■□□□□ 0.83
TDG-201ENST00000266775 SYNJ1O43426 1573 aa20.24■□□□□ 0.83
TDG-201ENST00000266775 GRIN2BQ13224 1484 aa20.23■□□□□ 0.83
TDG-201ENST00000266775 PBRM1Q86U86 1689 aa20.21■□□□□ 0.83
TDG-201ENST00000266775 SYNJ2O15056 1496 aa20.19■□□□□ 0.82
TDG-201ENST00000266775 TRHP20396 242 aaPredicted RBP20.18■□□□□ 0.82
TDG-201ENST00000266775 CHMP7Q8WUX9 453 aaPredicted RBP20.18■□□□□ 0.82
TDG-201ENST00000266775 ABCA5Q8WWZ7 1642 aa20.14■□□□□ 0.81
TDG-201ENST00000266775 GAPVD1Q14C86 1478 aa20.13■□□□□ 0.81
TDG-201ENST00000266775 ABCA10Q8WWZ4 1543 aa20.12■□□□□ 0.81
TDG-201ENST00000266775 ADAMTS12P58397 1594 aa19.99■□□□□ 0.79
TDG-201ENST00000266775 GRIN2AQ12879 1464 aa19.99■□□□□ 0.79
TDG-201ENST00000266775 BIVM-ERCC5R4GMW8 1640 aa19.98■□□□□ 0.79
TDG-201ENST00000266775 ERCC6L2Q5T890 1561 aa19.97■□□□□ 0.79
TDG-201ENST00000266775 CEP170Q5SW79 1584 aa19.96■□□□□ 0.79
TDG-201ENST00000266775 TOP2BQ02880 1626 aa19.95■□□□□ 0.78
TDG-201ENST00000266775 WRNQ14191 1432 aaPredicted RBP eCLIP19.95■□□□□ 0.78
TDG-201ENST00000266775 NUP160Q12769 1436 aa19.94■□□□□ 0.78
TDG-201ENST00000266775 SHROOM2Q13796 1616 aa19.91■□□□□ 0.78
TDG-201ENST00000266775 FHAD1B1AJZ9 1412 aa19.87■□□□□ 0.77
TDG-201ENST00000266775 ERICH3Q5RHP9 1530 aa19.86■□□□□ 0.77
TDG-201ENST00000266775 KIF13AQ9H1H9 1805 aa19.76■□□□□ 0.75
TDG-201ENST00000266775 PRG4Q92954 1404 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms