RNA–Protein interactions for RNA: ENST00000265344.8

KCTD20-201, Transcript of potassium channel tetramerization domain containing 20, humanhuman

TSL 2

Gene KCTD20, Length 1,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD20-201ENST00000265344 NISCHQ9Y2I1 1504 aa46.38■■■■■ 5.02
KCTD20-201ENST00000265344 CCDC180Q9P1Z9 1646 aa41.16■■■■■ 4.18
KCTD20-201ENST00000265344 ABCC9O60706 1549 aa40.39■■■■■ 4.06
KCTD20-201ENST00000265344 RB1CC1Q8TDY2 1594 aa38.79■■■■□ 3.8
KCTD20-201ENST00000265344 DCAF8L2P0C7V8 631 aa38.79■■■■□ 3.8
KCTD20-201ENST00000265344 NACADO15069 1562 aa38.76■■■■□ 3.8
KCTD20-201ENST00000265344 ZCCHC6Q5VYS8 1495 aaKnown RBP38.62■■■■□ 3.77
KCTD20-201ENST00000265344 MYO15BQ96JP2 1530 aa38.55■■■■□ 3.76
KCTD20-201ENST00000265344 DCAF1Q9Y4B6 1507 aa38.38■■■■□ 3.73
KCTD20-201ENST00000265344 UNC13AQ9UPW8 1703 aa37.87■■■■□ 3.65
KCTD20-201ENST00000265344 PABPN1Q86U42 306 aaKnown RBP eCLIP37.78■■■■□ 3.64
KCTD20-201ENST00000265344 BICRAQ9NZM4 1560 aa37.66■■■■□ 3.62
KCTD20-201ENST00000265344 SCRIBQ14160 1630 aa37.58■■■■□ 3.61
KCTD20-201ENST00000265344 SHROOM4Q9ULL8 1493 aa37.24■■■■□ 3.55
KCTD20-201ENST00000265344 DNAJC5BQ9UF47 199 aa37.19■■■■□ 3.54
KCTD20-201ENST00000265344 EIF4G1Q04637 1599 aaKnown RBP36.65■■■■□ 3.46
KCTD20-201ENST00000265344 CC2D2AQ9P2K1 1620 aa36.5■■■■□ 3.43
KCTD20-201ENST00000265344 CECR2Q9BXF3 1484 aa36.29■■■■□ 3.4
KCTD20-201ENST00000265344 SMARCA4P51532 1647 aa35.96■■■■□ 3.35
KCTD20-201ENST00000265344 BAZ1AQ9NRL2 1556 aaPredicted RBP35.92■■■■□ 3.34
KCTD20-201ENST00000265344 NCAPD3P42695 1498 aa35.83■■■■□ 3.33
KCTD20-201ENST00000265344 ATAD2BQ9ULI0 1458 aa35.83■■■■□ 3.33
KCTD20-201ENST00000265344 MROH2BQ7Z745 1585 aa35.75■■■■□ 3.31
KCTD20-201ENST00000265344 SMARCA2P51531 1590 aa35.73■■■■□ 3.31
KCTD20-201ENST00000265344 PEG3Q9GZU2 1588 aa35.63■■■■□ 3.29
KCTD20-201ENST00000265344 HMGXB3Q12766 1538 aa35.58■■■■□ 3.29
KCTD20-201ENST00000265344 BAZ1BQ9UIG0 1483 aaKnown RBP35.49■■■■□ 3.27
KCTD20-201ENST00000265344 RSF1Q96T23 1441 aaPredicted RBP35.36■■■■□ 3.25
KCTD20-201ENST00000265344 WIZO95785 1651 aa35.32■■■■□ 3.24
KCTD20-201ENST00000265344 NESP48681 1621 aa34.95■■■■□ 3.19
KCTD20-201ENST00000265344 TOP2AP11388 1531 aaKnown RBP34.95■■■■□ 3.19
KCTD20-201ENST00000265344 LAMC3Q9Y6N6 1575 aa34.81■■■■□ 3.16
KCTD20-201ENST00000265344 CADPSQ9ULU8 1353 aa34.78■■■■□ 3.16
KCTD20-201ENST00000265344 ERCC6Q03468 1493 aa34.78■■■■□ 3.16
KCTD20-201ENST00000265344 PDS5BQ9NTI5 1447 aa34.62■■■■□ 3.13
KCTD20-201ENST00000265344 CCDC88BA6NC98 1476 aa34.59■■■■□ 3.13
KCTD20-201ENST00000265344 CFTRP13569 1480 aa34.55■■■■□ 3.12
KCTD20-201ENST00000265344 KIF21AQ7Z4S6 1674 aa34.46■■■■□ 3.11
KCTD20-201ENST00000265344 SUPT5HO00267 1087 aaKnown RBP34.44■■■■□ 3.1
KCTD20-201ENST00000265344 CUX2O14529 1486 aa34.44■■■■□ 3.1
KCTD20-201ENST00000265344 THOC2Q8NI27 1593 aaKnown RBP34.38■■■■□ 3.09
KCTD20-201ENST00000265344 FANCD2Q9BXW9 1451 aa34.34■■■■□ 3.09
KCTD20-201ENST00000265344 CEP164Q9UPV0 1460 aa34.29■■■■□ 3.08
KCTD20-201ENST00000265344 MRC2Q9UBG0 1479 aa34.25■■■■□ 3.07
KCTD20-201ENST00000265344 PRDM2Q13029 1718 aa34.15■■■■□ 3.06
KCTD20-201ENST00000265344 WDR62O43379 1518 aa34.14■■■■□ 3.06
KCTD20-201ENST00000265344 URB2Q14146 1524 aaKnown RBP34.01■■■■□ 3.04
KCTD20-201ENST00000265344 TOPBP1Q92547 1522 aa33.79■■■■□ 3
KCTD20-201ENST00000265344 ABCC8Q09428 1581 aa33.78■■■■□ 3
KCTD20-201ENST00000265344 DNMBPQ6XZF7 1577 aa33.72■■■□□ 2.99
KCTD20-201ENST00000265344 IFT140Q96RY7 1462 aa33.58■■■□□ 2.97
KCTD20-201ENST00000265344 CUX1P39880 1505 aa33.53■■■□□ 2.96
KCTD20-201ENST00000265344 POLA1P09884 1462 aaPredicted RBP33.51■■■□□ 2.96
KCTD20-201ENST00000265344 DNAJC5Q9H3Z4 198 aa33.5■■■□□ 2.95
KCTD20-201ENST00000265344 ZNF608Q9ULD9 1512 aaPredicted RBP33.45■■■□□ 2.95
KCTD20-201ENST00000265344 TARBP1Q13395 1621 aaKnown RBP33.42■■■□□ 2.94
KCTD20-201ENST00000265344 FGD5Q6ZNL6 1462 aa33.41■■■□□ 2.94
KCTD20-201ENST00000265344 SOGA1O94964 1423 aa33.39■■■□□ 2.94
KCTD20-201ENST00000265344 RAD54L2Q9Y4B4 1467 aa33.38■■■□□ 2.93
KCTD20-201ENST00000265344 WRNQ14191 1432 aaPredicted RBP eCLIP33.31■■■□□ 2.92
KCTD20-201ENST00000265344 AQRO60306 1485 aaKnown RBP eCLIP33.28■■■□□ 2.921e-7■■■□□ 14.7
KCTD20-201ENST00000265344 EIF4G3O43432 1585 aaKnown RBP33.25■■■□□ 2.91
KCTD20-201ENST00000265344 TDRD9Q8NDG6 1382 aaKnown RBP33.22■■■□□ 2.91
KCTD20-201ENST00000265344 TOP2BQ02880 1626 aa33.21■■■□□ 2.91
KCTD20-201ENST00000265344 SYNJ1O43426 1573 aa33.21■■■□□ 2.91
KCTD20-201ENST00000265344 BIVM-ERCC5R4GMW8 1640 aa33.18■■■□□ 2.9
KCTD20-201ENST00000265344 WDR97A6NE52 1622 aa33.11■■■□□ 2.89
KCTD20-201ENST00000265344 ABCA10Q8WWZ4 1543 aa33.1■■■□□ 2.89
KCTD20-201ENST00000265344 OSCARQ8IYS5 282 aa33.06■■■□□ 2.88
KCTD20-201ENST00000265344 GAPVD1Q14C86 1478 aa32.99■■■□□ 2.87
KCTD20-201ENST00000265344 GRIN2BQ13224 1484 aa32.98■■■□□ 2.87
KCTD20-201ENST00000265344 ABCA5Q8WWZ7 1642 aa32.93■■■□□ 2.86
KCTD20-201ENST00000265344 SNAPC4Q5SXM2 1469 aa32.93■■■□□ 2.86
KCTD20-201ENST00000265344 MAGI1Q96QZ7 1491 aaPredicted RBP32.88■■■□□ 2.85
KCTD20-201ENST00000265344 FBLN2P98095 1184 aa32.87■■■□□ 2.85
KCTD20-201ENST00000265344 PBRM1Q86U86 1689 aa32.82■■■□□ 2.84
KCTD20-201ENST00000265344 CHD1O14646 1710 aa32.81■■■□□ 2.84
KCTD20-201ENST00000265344 CHMP7Q8WUX9 453 aaPredicted RBP32.78■■■□□ 2.84
KCTD20-201ENST00000265344 SYNJ2O15056 1496 aa32.76■■■□□ 2.84
KCTD20-201ENST00000265344 ERICH3Q5RHP9 1530 aa32.69■■■□□ 2.82
KCTD20-201ENST00000265344 ADAMTS12P58397 1594 aa32.62■■■□□ 2.81
KCTD20-201ENST00000265344 KIF27Q86VH2 1401 aa32.61■■■□□ 2.81
KCTD20-201ENST00000265344 FHAD1B1AJZ9 1412 aa32.61■■■□□ 2.81
KCTD20-201ENST00000265344 GRIN2AQ12879 1464 aa32.56■■■□□ 2.8
KCTD20-201ENST00000265344 IGF1RP08069 1367 aa32.55■■■□□ 2.8
KCTD20-201ENST00000265344 CLASP1Q7Z460 1538 aa32.53■■■□□ 2.8
KCTD20-201ENST00000265344 TRIM41Q8WV44 630 aa32.52■■■□□ 2.8
KCTD20-201ENST00000265344 ARHGEF11O15085 1522 aa32.48■■■□□ 2.79
KCTD20-201ENST00000265344 RIMBP3CA6NJZ7 1639 aa32.46■■■□□ 2.79
KCTD20-201ENST00000265344 RIMBP3BA6NNM3 1639 aa32.46■■■□□ 2.79
KCTD20-201ENST00000265344 RIMBP3Q9UFD9 1639 aa32.46■■■□□ 2.79
KCTD20-201ENST00000265344 NUP160Q12769 1436 aa32.43■■■□□ 2.78
KCTD20-201ENST00000265344 CEP170Q5SW79 1584 aa32.37■■■□□ 2.77
KCTD20-201ENST00000265344 RUSC2Q8N2Y8 1516 aa32.34■■■□□ 2.77
KCTD20-201ENST00000265344 CUL7Q14999 1698 aa32.33■■■□□ 2.77
KCTD20-201ENST00000265344 CARMIL1Q5VZK9 1371 aa32.33■■■□□ 2.77
KCTD20-201ENST00000265344 ARAP1Q96P48 1450 aa32.23■■■□□ 2.75
KCTD20-201ENST00000265344 CYB5RLQ6IPT4 315 aa32.23■■■□□ 2.75
KCTD20-201ENST00000265344 CHIC1Q5VXU3 224 aa32.16■■■□□ 2.74
KCTD20-201ENST00000265344 SHROOM2Q13796 1616 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms