RNA–Protein interactions for RNA: ENST00000260943.10

ERBB4-201, Transcript of erb-b2 receptor tyrosine kinase 4, humanhuman

TSL 5

Gene ERBB4, Length 2,194 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB4-201ENST00000260943 NISCHQ9Y2I1 1504 aa32.58■■■□□ 2.81
ERBB4-201ENST00000260943 CCDC180Q9P1Z9 1646 aa28.21■■■□□ 2.11
ERBB4-201ENST00000260943 ZCCHC6Q5VYS8 1495 aaKnown RBP27.43■■□□□ 1.98
ERBB4-201ENST00000260943 SHROOM4Q9ULL8 1493 aa26.94■■□□□ 1.9
ERBB4-201ENST00000260943 DCAF8L2P0C7V8 631 aa26.91■■□□□ 1.9
ERBB4-201ENST00000260943 DCAF1Q9Y4B6 1507 aa26.88■■□□□ 1.89
ERBB4-201ENST00000260943 ABCC9O60706 1549 aa26.47■■□□□ 1.83
ERBB4-201ENST00000260943 MYO15BQ96JP2 1530 aa26.42■■□□□ 1.82
ERBB4-201ENST00000260943 NACADO15069 1562 aa26.2■■□□□ 1.78
ERBB4-201ENST00000260943 SUPT5HO00267 1087 aaKnown RBP26.09■■□□□ 1.77
ERBB4-201ENST00000260943 SCRIBQ14160 1630 aa26.08■■□□□ 1.77
ERBB4-201ENST00000260943 RB1CC1Q8TDY2 1594 aa25.91■■□□□ 1.74
ERBB4-201ENST00000260943 UNC13AQ9UPW8 1703 aa25.47■■□□□ 1.67
ERBB4-201ENST00000260943 RSF1Q96T23 1441 aaPredicted RBP25.43■■□□□ 1.66
ERBB4-201ENST00000260943 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
ERBB4-201ENST00000260943 MROH2BQ7Z745 1585 aa25.22■■□□□ 1.63
ERBB4-201ENST00000260943 BICRAQ9NZM4 1560 aa25.15■■□□□ 1.62
ERBB4-201ENST00000260943 BAZ1AQ9NRL2 1556 aaPredicted RBP25.12■■□□□ 1.61
ERBB4-201ENST00000260943 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
ERBB4-201ENST00000260943 PABPN1Q86U42 306 aaKnown RBP eCLIP25.05■■□□□ 1.6
ERBB4-201ENST00000260943 WIZO95785 1651 aa25.05■■□□□ 1.6
ERBB4-201ENST00000260943 SMARCA4P51532 1647 aa24.98■■□□□ 1.59
ERBB4-201ENST00000260943 TOP2AP11388 1531 aaKnown RBP24.74■■□□□ 1.55
ERBB4-201ENST00000260943 PEG3Q9GZU2 1588 aa24.62■■□□□ 1.53
ERBB4-201ENST00000260943 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
ERBB4-201ENST00000260943 CCDC88BA6NC98 1476 aa24.53■■□□□ 1.52
ERBB4-201ENST00000260943 ATAD2BQ9ULI0 1458 aa24.48■■□□□ 1.51
ERBB4-201ENST00000260943 EIF4G1Q04637 1599 aaKnown RBP24.47■■□□□ 1.51
ERBB4-201ENST00000260943 TRIM41Q8WV44 630 aa24.46■■□□□ 1.51
ERBB4-201ENST00000260943 BAZ1BQ9UIG0 1483 aaKnown RBP24.37■■□□□ 1.49
ERBB4-201ENST00000260943 LOC105371045A0A1W2PR82 267 aa24.22■■□□□ 1.47
ERBB4-201ENST00000260943 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
ERBB4-201ENST00000260943 HMGXB3Q12766 1538 aa24.18■■□□□ 1.46
ERBB4-201ENST00000260943 ABCC8Q09428 1581 aa24.16■■□□□ 1.46
ERBB4-201ENST00000260943 FAM9AQ8IZU1 332 aaPredicted RBP24.08■■□□□ 1.45
ERBB4-201ENST00000260943 CC2D2AQ9P2K1 1620 aa23.93■■□□□ 1.42
ERBB4-201ENST00000260943 WRNQ14191 1432 aaPredicted RBP eCLIP23.92■■□□□ 1.42
ERBB4-201ENST00000260943 SYNJ1O43426 1573 aa23.82■■□□□ 1.4
ERBB4-201ENST00000260943 EHMT2Q96KQ7 1210 aa23.78■■□□□ 1.4
ERBB4-201ENST00000260943 SOGA1O94964 1423 aa23.77■■□□□ 1.4
ERBB4-201ENST00000260943 CFTRP13569 1480 aa23.76■■□□□ 1.39
ERBB4-201ENST00000260943 EEA1Q15075 1411 aa23.72■■□□□ 1.39
ERBB4-201ENST00000260943 PRDM2Q13029 1718 aa23.68■■□□□ 1.38
ERBB4-201ENST00000260943 RUSC2Q8N2Y8 1516 aa23.68■■□□□ 1.38
ERBB4-201ENST00000260943 TOP2BQ02880 1626 aa23.67■■□□□ 1.38
ERBB4-201ENST00000260943 BIVM-ERCC5R4GMW8 1640 aa23.65■■□□□ 1.38
ERBB4-201ENST00000260943 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
ERBB4-201ENST00000260943 CSRNP3Q8WYN3 585 aa23.61■■□□□ 1.37
ERBB4-201ENST00000260943 CUX1P39880 1505 aa23.55■■□□□ 1.36
ERBB4-201ENST00000260943 PCGF6Q9BYE7 350 aa23.47■■□□□ 1.35
ERBB4-201ENST00000260943 GOLGA3Q08378 1498 aa23.45■■□□□ 1.34
ERBB4-201ENST00000260943 TNIKQ9UKE5 1360 aa23.44■■□□□ 1.34
ERBB4-201ENST00000260943 KIF21BO75037 1637 aa23.42■■□□□ 1.34
ERBB4-201ENST00000260943 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
ERBB4-201ENST00000260943 UBTFP17480 764 aaKnown RBP23.38■■□□□ 1.33
ERBB4-201ENST00000260943 FANCD2Q9BXW9 1451 aa23.37■■□□□ 1.33
ERBB4-201ENST00000260943 CEP162Q5TB80 1403 aa23.36■■□□□ 1.33
ERBB4-201ENST00000260943 NESP48681 1621 aa23.35■■□□□ 1.33
ERBB4-201ENST00000260943 TRIM26Q12899 539 aaPredicted RBP23.33■■□□□ 1.33
ERBB4-201ENST00000260943 LAMC3Q9Y6N6 1575 aa23.31■■□□□ 1.32
ERBB4-201ENST00000260943 DNAJC5BQ9UF47 199 aa23.28■■□□□ 1.32
ERBB4-201ENST00000260943 KIF27Q86VH2 1401 aa23.28■■□□□ 1.32
ERBB4-201ENST00000260943 RAPGEF2Q9Y4G8 1499 aa23.26■■□□□ 1.31
ERBB4-201ENST00000260943 FGD5Q6ZNL6 1462 aa23.24■■□□□ 1.31
ERBB4-201ENST00000260943 DNMBPQ6XZF7 1577 aa23.21■■□□□ 1.31
ERBB4-201ENST00000260943 PRXQ9BXM0 1461 aa23.2■■□□□ 1.3
ERBB4-201ENST00000260943 ERICH3Q5RHP9 1530 aa23.19■■□□□ 1.3
ERBB4-201ENST00000260943 CUX2O14529 1486 aa23.17■■□□□ 1.3
ERBB4-201ENST00000260943 TOPBP1Q92547 1522 aa23.16■■□□□ 1.3
ERBB4-201ENST00000260943 PDS5BQ9NTI5 1447 aa23.13■■□□□ 1.29
ERBB4-201ENST00000260943 CLIP1P30622 1438 aa23.1■■□□□ 1.29
ERBB4-201ENST00000260943 PPARGC1BQ86YN6 1023 aaKnown RBP23.08■■□□□ 1.29
ERBB4-201ENST00000260943 POLA1P09884 1462 aaPredicted RBP23.07■■□□□ 1.28
ERBB4-201ENST00000260943 URB2Q14146 1524 aaKnown RBP23.06■■□□□ 1.28
ERBB4-201ENST00000260943 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
ERBB4-201ENST00000260943 IGF1RP08069 1367 aa23.05■■□□□ 1.28
ERBB4-201ENST00000260943 HRCP23327 699 aa23.04■■□□□ 1.28
ERBB4-201ENST00000260943 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
ERBB4-201ENST00000260943 ABCA10Q8WWZ4 1543 aa23.02■■□□□ 1.27
ERBB4-201ENST00000260943 RANGAP1P46060 587 aaPredicted RBP22.95■■□□□ 1.26
ERBB4-201ENST00000260943 CARMIL1Q5VZK9 1371 aa22.94■■□□□ 1.26
ERBB4-201ENST00000260943 VPS8Q8N3P4 1428 aa22.93■■□□□ 1.26
ERBB4-201ENST00000260943 WDR97A6NE52 1622 aa22.92■■□□□ 1.26
ERBB4-201ENST00000260943 TTBK1Q5TCY1 1321 aaPredicted RBP22.84■■□□□ 1.25
ERBB4-201ENST00000260943 ARAP1Q96P48 1450 aa22.83■■□□□ 1.24
ERBB4-201ENST00000260943 CUL7Q14999 1698 aa22.82■■□□□ 1.24
ERBB4-201ENST00000260943 MRC2Q9UBG0 1479 aa22.82■■□□□ 1.24
ERBB4-201ENST00000260943 ABCA5Q8WWZ7 1642 aa22.8■■□□□ 1.24
ERBB4-201ENST00000260943 TARBP1Q13395 1621 aaKnown RBP22.78■■□□□ 1.24
ERBB4-201ENST00000260943 TDRD9Q8NDG6 1382 aaKnown RBP22.78■■□□□ 1.24
ERBB4-201ENST00000260943 ARHGAP35Q9NRY4 1499 aa22.76■■□□□ 1.23
ERBB4-201ENST00000260943 GAPVD1Q14C86 1478 aa22.76■■□□□ 1.23
ERBB4-201ENST00000260943 APLP2Q06481 763 aa22.74■■□□□ 1.23
ERBB4-201ENST00000260943 WDR62O43379 1518 aa22.67■■□□□ 1.22
ERBB4-201ENST00000260943 CTTNBP2Q8WZ74 1663 aa22.65■■□□□ 1.22
ERBB4-201ENST00000260943 ERCC6Q03468 1493 aa22.64■■□□□ 1.21
ERBB4-201ENST00000260943 PBRM1Q86U86 1689 aa22.61■■□□□ 1.21
ERBB4-201ENST00000260943 IFT140Q96RY7 1462 aa22.58■■□□□ 1.21
ERBB4-201ENST00000260943 AQRO60306 1485 aaKnown RBP eCLIP22.57■■□□□ 1.2
ERBB4-201ENST00000260943 ZEB1P37275 1124 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms