RNA–Protein interactions for RNA: ENST00000260056.6

RAB30-201, Transcript of RAB30, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB30, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB30-201ENST00000260056 NISCHQ9Y2I1 1504 aa27.1■■□□□ 1.93
RAB30-201ENST00000260056 ABCC9O60706 1549 aa25.17■■□□□ 1.62
RAB30-201ENST00000260056 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
RAB30-201ENST00000260056 DNAJC5BQ9UF47 199 aa24.17■■□□□ 1.46
RAB30-201ENST00000260056 RB1CC1Q8TDY2 1594 aa23.62■■□□□ 1.37
RAB30-201ENST00000260056 PABPN1Q86U42 306 aaKnown RBP eCLIP23.29■■□□□ 1.32
RAB30-201ENST00000260056 NACADO15069 1562 aa23.24■■□□□ 1.31
RAB30-201ENST00000260056 UNC13AQ9UPW8 1703 aa23.17■■□□□ 1.3
RAB30-201ENST00000260056 DCAF8L2P0C7V8 631 aa23.02■■□□□ 1.28
RAB30-201ENST00000260056 BICRAQ9NZM4 1560 aa22.95■■□□□ 1.27
RAB30-201ENST00000260056 MYO15BQ96JP2 1530 aa22.9■■□□□ 1.26
RAB30-201ENST00000260056 CECR2Q9BXF3 1484 aa22.72■■□□□ 1.23
RAB30-201ENST00000260056 CC2D2AQ9P2K1 1620 aa22.7■■□□□ 1.22
RAB30-201ENST00000260056 DNAJC5Q9H3Z4 198 aa22.68■■□□□ 1.22
RAB30-201ENST00000260056 SHROOM4Q9ULL8 1493 aa22.52■■□□□ 1.2
RAB30-201ENST00000260056 DCAF1Q9Y4B6 1507 aa22.49■■□□□ 1.19
RAB30-201ENST00000260056 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
RAB30-201ENST00000260056 ZCCHC6Q5VYS8 1495 aaKnown RBP22.43■■□□□ 1.18
RAB30-201ENST00000260056 SCRIBQ14160 1630 aa22.3■■□□□ 1.16
RAB30-201ENST00000260056 CUX2O14529 1486 aa21.93■■□□□ 1.1
RAB30-201ENST00000260056 ERCC6Q03468 1493 aa21.79■■□□□ 1.08
RAB30-201ENST00000260056 TRIM41Q8WV44 630 aa21.49■■□□□ 1.03
RAB30-201ENST00000260056 NCAPD3P42695 1498 aa21.43■■□□□ 1.02
RAB30-201ENST00000260056 NESP48681 1621 aa21.42■■□□□ 1.02
RAB30-201ENST00000260056 THOC2Q8NI27 1593 aaKnown RBP21.36■■□□□ 1.01
RAB30-201ENST00000260056 ATAD2BQ9ULI0 1458 aa21.31■■□□□ 1
RAB30-201ENST00000260056 HMGXB3Q12766 1538 aa21.26■□□□□ 0.99
RAB30-201ENST00000260056 SMARCA2P51531 1590 aa21.24■□□□□ 0.99
RAB30-201ENST00000260056 SMARCA4P51532 1647 aa21.19■□□□□ 0.98
RAB30-201ENST00000260056 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
RAB30-201ENST00000260056 LAMC3Q9Y6N6 1575 aa21.12■□□□□ 0.97
RAB30-201ENST00000260056 BAZ1BQ9UIG0 1483 aaKnown RBP21.09■□□□□ 0.97
RAB30-201ENST00000260056 BAZ1AQ9NRL2 1556 aaPredicted RBP21.09■□□□□ 0.97
RAB30-201ENST00000260056 PEG3Q9GZU2 1588 aa21.08■□□□□ 0.96
RAB30-201ENST00000260056 PDS5BQ9NTI5 1447 aa20.99■□□□□ 0.95
RAB30-201ENST00000260056 MRC2Q9UBG0 1479 aa20.88■□□□□ 0.93
RAB30-201ENST00000260056 WDR62O43379 1518 aa20.86■□□□□ 0.93
RAB30-201ENST00000260056 MROH2BQ7Z745 1585 aa20.82■□□□□ 0.92
RAB30-201ENST00000260056 OSCARQ8IYS5 282 aa20.77■□□□□ 0.92
RAB30-201ENST00000260056 CADPSQ9ULU8 1353 aa20.76■□□□□ 0.91
RAB30-201ENST00000260056 RIMBP3CA6NJZ7 1639 aa20.69■□□□□ 0.9
RAB30-201ENST00000260056 RIMBP3BA6NNM3 1639 aa20.69■□□□□ 0.9
RAB30-201ENST00000260056 RIMBP3Q9UFD9 1639 aa20.69■□□□□ 0.9
RAB30-201ENST00000260056 CEP164Q9UPV0 1460 aa20.67■□□□□ 0.9
RAB30-201ENST00000260056 FANCD2Q9BXW9 1451 aa20.58■□□□□ 0.88
RAB30-201ENST00000260056 WIZO95785 1651 aa20.55■□□□□ 0.88
RAB30-201ENST00000260056 ARHGEF11O15085 1522 aa20.52■□□□□ 0.88
RAB30-201ENST00000260056 URB2Q14146 1524 aaKnown RBP20.46■□□□□ 0.87
RAB30-201ENST00000260056 CFTRP13569 1480 aa20.44■□□□□ 0.86
RAB30-201ENST00000260056 TRHP20396 242 aaPredicted RBP20.42■□□□□ 0.86
RAB30-201ENST00000260056 CYB5RLQ6IPT4 315 aa20.38■□□□□ 0.85
RAB30-201ENST00000260056 TOP2AP11388 1531 aaKnown RBP20.35■□□□□ 0.85
RAB30-201ENST00000260056 AEBP2Q6ZN18 517 aaPredicted RBP20.34■□□□□ 0.85
RAB30-201ENST00000260056 ZNF608Q9ULD9 1512 aaPredicted RBP20.33■□□□□ 0.84
RAB30-201ENST00000260056 RSF1Q96T23 1441 aaPredicted RBP20.33■□□□□ 0.84
RAB30-201ENST00000260056 PRDM2Q13029 1718 aa20.29■□□□□ 0.84
RAB30-201ENST00000260056 ARAP1Q96P48 1450 aa20.26■□□□□ 0.83
RAB30-201ENST00000260056 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
RAB30-201ENST00000260056 CHD1O14646 1710 aa20.25■□□□□ 0.83
RAB30-201ENST00000260056 EIF4G3O43432 1585 aaKnown RBP20.22■□□□□ 0.83
RAB30-201ENST00000260056 TOPBP1Q92547 1522 aa20.1■□□□□ 0.81
RAB30-201ENST00000260056 FBLN2P98095 1184 aa20.08■□□□□ 0.8
RAB30-201ENST00000260056 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
RAB30-201ENST00000260056 CCDC88BA6NC98 1476 aa20.06■□□□□ 0.8
RAB30-201ENST00000260056 AQRO60306 1485 aaKnown RBP eCLIP20.04■□□□□ 0.8
RAB30-201ENST00000260056 TARBP1Q13395 1621 aaKnown RBP20■□□□□ 0.79
RAB30-201ENST00000260056 DNMBPQ6XZF7 1577 aa19.98■□□□□ 0.79
RAB30-201ENST00000260056 CLASP1Q7Z460 1538 aa19.91■□□□□ 0.78
RAB30-201ENST00000260056 POLA1P09884 1462 aaPredicted RBP19.85■□□□□ 0.77
RAB30-201ENST00000260056 SYNJ1O43426 1573 aa19.85■□□□□ 0.77
RAB30-201ENST00000260056 SNAPC4Q5SXM2 1469 aa19.84■□□□□ 0.77
RAB30-201ENST00000260056 RAD54L2Q9Y4B4 1467 aa19.81■□□□□ 0.76
RAB30-201ENST00000260056 WDR97A6NE52 1622 aa19.81■□□□□ 0.76
RAB30-201ENST00000260056 TDRD9Q8NDG6 1382 aaKnown RBP19.79■□□□□ 0.76
RAB30-201ENST00000260056 CHMP7Q8WUX9 453 aaPredicted RBP19.76■□□□□ 0.75
RAB30-201ENST00000260056 GAPVD1Q14C86 1478 aa19.75■□□□□ 0.75
RAB30-201ENST00000260056 SOGA1O94964 1423 aa19.72■□□□□ 0.75
RAB30-201ENST00000260056 MAGI1Q96QZ7 1491 aaPredicted RBP19.72■□□□□ 0.75
RAB30-201ENST00000260056 SYNJ2O15056 1496 aa19.66■□□□□ 0.74
RAB30-201ENST00000260056 GRIN2BQ13224 1484 aa19.65■□□□□ 0.74
RAB30-201ENST00000260056 FGD5Q6ZNL6 1462 aa19.65■□□□□ 0.74
RAB30-201ENST00000260056 PBRM1Q86U86 1689 aa19.62■□□□□ 0.73
RAB30-201ENST00000260056 ERCC6L2Q5T890 1561 aa19.59■□□□□ 0.73
RAB30-201ENST00000260056 CUX1P39880 1505 aa19.59■□□□□ 0.73
RAB30-201ENST00000260056 KIF13AQ9H1H9 1805 aa19.58■□□□□ 0.73
RAB30-201ENST00000260056 ILDR1Q86SU0 546 aaPredicted RBP19.55■□□□□ 0.72
RAB30-201ENST00000260056 CEP170Q5SW79 1584 aa19.47■□□□□ 0.71
RAB30-201ENST00000260056 ABCA10Q8WWZ4 1543 aa19.47■□□□□ 0.71
RAB30-201ENST00000260056 ABCA5Q8WWZ7 1642 aa19.45■□□□□ 0.7
RAB30-201ENST00000260056 GRIN2AQ12879 1464 aa19.41■□□□□ 0.7
RAB30-201ENST00000260056 SHROOM2Q13796 1616 aa19.37■□□□□ 0.69
RAB30-201ENST00000260056 KDM4FA0A1W2PPD8 638 aa19.37■□□□□ 0.69
RAB30-201ENST00000260056 ADAMTS12P58397 1594 aa19.34■□□□□ 0.69
RAB30-201ENST00000260056 NUP160Q12769 1436 aa19.34■□□□□ 0.69
RAB30-201ENST00000260056 KDM6BO15054 1643 aa19.32■□□□□ 0.68
RAB30-201ENST00000260056 WRNQ14191 1432 aaPredicted RBP eCLIP19.32■□□□□ 0.68
RAB30-201ENST00000260056 FAM69CQ0P6D2 419 aa19.32■□□□□ 0.68
RAB30-201ENST00000260056 BIVM-ERCC5R4GMW8 1640 aa19.29■□□□□ 0.68
RAB30-201ENST00000260056 ABCC10Q5T3U5 1492 aa19.29■□□□□ 0.68
RAB30-201ENST00000260056 TOP2BQ02880 1626 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms