RNA–Protein interactions for RNA: ENST00000253788.9

RPL27-201, Transcript of ribosomal protein L27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL27, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL27-201ENST00000253788 NISCHQ9Y2I1 1504 aa23.94■■□□□ 1.42
RPL27-201ENST00000253788 AEBP2Q6ZN18 517 aaPredicted RBP21.68■■□□□ 1.06
RPL27-201ENST00000253788 CCDC180Q9P1Z9 1646 aa21.38■■□□□ 1.01
RPL27-201ENST00000253788 ABCC9O60706 1549 aa21.26■□□□□ 0.99
RPL27-201ENST00000253788 CHIC1Q5VXU3 224 aa20.38■□□□□ 0.85
RPL27-201ENST00000253788 RB1CC1Q8TDY2 1594 aa20.34■□□□□ 0.85
RPL27-201ENST00000253788 DCAF8L2P0C7V8 631 aa20.28■□□□□ 0.84
RPL27-201ENST00000253788 NACADO15069 1562 aa20.25■□□□□ 0.83
RPL27-201ENST00000253788 MYO15BQ96JP2 1530 aa20.02■□□□□ 0.8
RPL27-201ENST00000253788 PABPN1Q86U42 306 aaKnown RBP eCLIP19.87■□□□□ 0.77
RPL27-201ENST00000253788 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.77
RPL27-201ENST00000253788 ZCCHC6Q5VYS8 1495 aaKnown RBP19.83■□□□□ 0.76
RPL27-201ENST00000253788 DCAF1Q9Y4B6 1507 aa19.8■□□□□ 0.76
RPL27-201ENST00000253788 UNC13AQ9UPW8 1703 aa19.73■□□□□ 0.75
RPL27-201ENST00000253788 BICRAQ9NZM4 1560 aa19.64■□□□□ 0.73
RPL27-201ENST00000253788 SHROOM4Q9ULL8 1493 aa19.51■□□□□ 0.71
RPL27-201ENST00000253788 SCRIBQ14160 1630 aa19.45■□□□□ 0.7
RPL27-201ENST00000253788 EIF4G1Q04637 1599 aaKnown RBP19.19■□□□□ 0.66
RPL27-201ENST00000253788 CC2D2AQ9P2K1 1620 aa19.19■□□□□ 0.66
RPL27-201ENST00000253788 CECR2Q9BXF3 1484 aa19.17■□□□□ 0.66
RPL27-201ENST00000253788 NCAPD3P42695 1498 aa18.71■□□□□ 0.59
RPL27-201ENST00000253788 ATAD2BQ9ULI0 1458 aa18.63■□□□□ 0.57
RPL27-201ENST00000253788 SMARCA2P51531 1590 aa18.61■□□□□ 0.57
RPL27-201ENST00000253788 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
RPL27-201ENST00000253788 SMARCA4P51532 1647 aa18.6■□□□□ 0.57
RPL27-201ENST00000253788 BAZ1AQ9NRL2 1556 aaPredicted RBP18.59■□□□□ 0.57
RPL27-201ENST00000253788 HMGXB3Q12766 1538 aa18.53■□□□□ 0.56
RPL27-201ENST00000253788 BAZ1BQ9UIG0 1483 aaKnown RBP18.47■□□□□ 0.55
RPL27-201ENST00000253788 PEG3Q9GZU2 1588 aa18.43■□□□□ 0.54
RPL27-201ENST00000253788 ERCC6Q03468 1493 aa18.4■□□□□ 0.54
RPL27-201ENST00000253788 MROH2BQ7Z745 1585 aa18.4■□□□□ 0.54
RPL27-201ENST00000253788 CUX2O14529 1486 aa18.32■□□□□ 0.52
RPL27-201ENST00000253788 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
RPL27-201ENST00000253788 NESP48681 1621 aa18.27■□□□□ 0.51
RPL27-201ENST00000253788 DNAJC5Q9H3Z4 198 aa18.24■□□□□ 0.51
RPL27-201ENST00000253788 LAMC3Q9Y6N6 1575 aa18.22■□□□□ 0.51
RPL27-201ENST00000253788 PDS5BQ9NTI5 1447 aa18.19■□□□□ 0.5
RPL27-201ENST00000253788 CADPSQ9ULU8 1353 aa18.17■□□□□ 0.5
RPL27-201ENST00000253788 WIZO95785 1651 aa18.16■□□□□ 0.5
RPL27-201ENST00000253788 RSF1Q96T23 1441 aaPredicted RBP18.13■□□□□ 0.49
RPL27-201ENST00000253788 THOC2Q8NI27 1593 aaKnown RBP18.01■□□□□ 0.47
RPL27-201ENST00000253788 KIF21AQ7Z4S6 1674 aa18■□□□□ 0.47
RPL27-201ENST00000253788 TOP2AP11388 1531 aaKnown RBP17.98■□□□□ 0.47
RPL27-201ENST00000253788 MRC2Q9UBG0 1479 aa17.95■□□□□ 0.46
RPL27-201ENST00000253788 CFTRP13569 1480 aa17.95■□□□□ 0.46
RPL27-201ENST00000253788 CEP164Q9UPV0 1460 aa17.92■□□□□ 0.46
RPL27-201ENST00000253788 FANCD2Q9BXW9 1451 aa17.91■□□□□ 0.46
RPL27-201ENST00000253788 WDR62O43379 1518 aa17.86■□□□□ 0.45
RPL27-201ENST00000253788 CCDC88BA6NC98 1476 aa17.81■□□□□ 0.44
RPL27-201ENST00000253788 URB2Q14146 1524 aaKnown RBP17.71■□□□□ 0.43
RPL27-201ENST00000253788 PRDM2Q13029 1718 aa17.67■□□□□ 0.42
RPL27-201ENST00000253788 ABCC8Q09428 1581 aa17.65■□□□□ 0.42
RPL27-201ENST00000253788 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
RPL27-201ENST00000253788 IFT140Q96RY7 1462 aa17.57■□□□□ 0.4
RPL27-201ENST00000253788 TOPBP1Q92547 1522 aa17.57■□□□□ 0.4
RPL27-201ENST00000253788 SUPT5HO00267 1087 aaKnown RBP17.51■□□□□ 0.39
RPL27-201ENST00000253788 DNMBPQ6XZF7 1577 aa17.5■□□□□ 0.39
RPL27-201ENST00000253788 ZNF608Q9ULD9 1512 aaPredicted RBP17.46■□□□□ 0.39
RPL27-201ENST00000253788 TRIM41Q8WV44 630 aa17.45■□□□□ 0.38
RPL27-201ENST00000253788 POLA1P09884 1462 aaPredicted RBP17.39■□□□□ 0.37
RPL27-201ENST00000253788 SOGA1O94964 1423 aa17.38■□□□□ 0.37
RPL27-201ENST00000253788 AQRO60306 1485 aaKnown RBP eCLIP17.37■□□□□ 0.374e-8■■■■□ 20.1
RPL27-201ENST00000253788 TARBP1Q13395 1621 aaKnown RBP17.36■□□□□ 0.37
RPL27-201ENST00000253788 EIF4G3O43432 1585 aaKnown RBP17.33■□□□□ 0.37
RPL27-201ENST00000253788 FBLN2P98095 1184 aa17.33■□□□□ 0.36
RPL27-201ENST00000253788 RAD54L2Q9Y4B4 1467 aa17.32■□□□□ 0.36
RPL27-201ENST00000253788 FOXD1Q16676 465 aa17.32■□□□□ 0.36
RPL27-201ENST00000253788 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
RPL27-201ENST00000253788 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
RPL27-201ENST00000253788 CUX1P39880 1505 aa17.28■□□□□ 0.36
RPL27-201ENST00000253788 WDR97A6NE52 1622 aa17.25■□□□□ 0.35
RPL27-201ENST00000253788 CHMP7Q8WUX9 453 aaPredicted RBP17.24■□□□□ 0.35
RPL27-201ENST00000253788 GRIN2BQ13224 1484 aa17.2■□□□□ 0.34
RPL27-201ENST00000253788 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
RPL27-201ENST00000253788 RIMBP3CA6NJZ7 1639 aa17.18■□□□□ 0.34
RPL27-201ENST00000253788 RIMBP3BA6NNM3 1639 aa17.18■□□□□ 0.34
RPL27-201ENST00000253788 RIMBP3Q9UFD9 1639 aa17.18■□□□□ 0.34
RPL27-201ENST00000253788 ARHGEF11O15085 1522 aa17.17■□□□□ 0.34
RPL27-201ENST00000253788 CHD1O14646 1710 aa17.17■□□□□ 0.34
RPL27-201ENST00000253788 WRNQ14191 1432 aaPredicted RBP eCLIP17.16■□□□□ 0.345e-10■■□□□ 13.4
RPL27-201ENST00000253788 SNAPC4Q5SXM2 1469 aa17.16■□□□□ 0.34
RPL27-201ENST00000253788 CYB5RLQ6IPT4 315 aa17.15■□□□□ 0.34
RPL27-201ENST00000253788 GAPVD1Q14C86 1478 aa17.15■□□□□ 0.34
RPL27-201ENST00000253788 ABCA10Q8WWZ4 1543 aa17.14■□□□□ 0.33
RPL27-201ENST00000253788 SYNJ2O15056 1496 aa17.11■□□□□ 0.33
RPL27-201ENST00000253788 SYNJ1O43426 1573 aa17.07■□□□□ 0.32
RPL27-201ENST00000253788 TOP2BQ02880 1626 aa17.07■□□□□ 0.32
RPL27-201ENST00000253788 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
RPL27-201ENST00000253788 BIVM-ERCC5R4GMW8 1640 aa17.03■□□□□ 0.32
RPL27-201ENST00000253788 PBRM1Q86U86 1689 aa17.02■□□□□ 0.32
RPL27-201ENST00000253788 CLASP1Q7Z460 1538 aa17.01■□□□□ 0.31
RPL27-201ENST00000253788 ARAP1Q96P48 1450 aa16.99■□□□□ 0.31
RPL27-201ENST00000253788 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.3
RPL27-201ENST00000253788 GRIN2AQ12879 1464 aa16.94■□□□□ 0.3
RPL27-201ENST00000253788 TRHP20396 242 aaPredicted RBP16.94■□□□□ 0.3
RPL27-201ENST00000253788 ERICH3Q5RHP9 1530 aa16.93■□□□□ 0.3
RPL27-201ENST00000253788 ADAMTS12P58397 1594 aa16.89■□□□□ 0.29
RPL27-201ENST00000253788 NUP160Q12769 1436 aa16.88■□□□□ 0.29
RPL27-201ENST00000253788 KIF27Q86VH2 1401 aa16.83■□□□□ 0.28
RPL27-201ENST00000253788 JPH4Q96JJ6 628 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms