RNA–Protein interactions for RNA: ENST00000243967.8

ARHGAP40-201, Transcript of Rho GTPase activating protein 40, humanhuman

APPRIS ALT2 TSL 5

Gene ARHGAP40, Length 1,825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP40-201ENST00000243967 NISCHQ9Y2I1 1504 aa32.43■■■□□ 2.78
ARHGAP40-201ENST00000243967 CCDC180Q9P1Z9 1646 aa28.21■■■□□ 2.11
ARHGAP40-201ENST00000243967 ZCCHC6Q5VYS8 1495 aaKnown RBP27.33■■□□□ 1.97
ARHGAP40-201ENST00000243967 DCAF1Q9Y4B6 1507 aa26.79■■□□□ 1.88
ARHGAP40-201ENST00000243967 SHROOM4Q9ULL8 1493 aa26.72■■□□□ 1.87
ARHGAP40-201ENST00000243967 DCAF8L2P0C7V8 631 aa26.65■■□□□ 1.86
ARHGAP40-201ENST00000243967 ABCC9O60706 1549 aa26.35■■□□□ 1.81
ARHGAP40-201ENST00000243967 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
ARHGAP40-201ENST00000243967 NACADO15069 1562 aa26.12■■□□□ 1.77
ARHGAP40-201ENST00000243967 SCRIBQ14160 1630 aa26.02■■□□□ 1.76
ARHGAP40-201ENST00000243967 RB1CC1Q8TDY2 1594 aa25.86■■□□□ 1.73
ARHGAP40-201ENST00000243967 SUPT5HO00267 1087 aaKnown RBP25.81■■□□□ 1.72
ARHGAP40-201ENST00000243967 UNC13AQ9UPW8 1703 aa25.5■■□□□ 1.67
ARHGAP40-201ENST00000243967 RSF1Q96T23 1441 aaPredicted RBP25.25■■□□□ 1.63
ARHGAP40-201ENST00000243967 CECR2Q9BXF3 1484 aa25.18■■□□□ 1.62
ARHGAP40-201ENST00000243967 MROH2BQ7Z745 1585 aa25.09■■□□□ 1.61
ARHGAP40-201ENST00000243967 BICRAQ9NZM4 1560 aa25.09■■□□□ 1.61
ARHGAP40-201ENST00000243967 BAZ1AQ9NRL2 1556 aaPredicted RBP25.04■■□□□ 1.6
ARHGAP40-201ENST00000243967 WIZO95785 1651 aa24.97■■□□□ 1.59
ARHGAP40-201ENST00000243967 SMARCA4P51532 1647 aa24.92■■□□□ 1.58
ARHGAP40-201ENST00000243967 PABPN1Q86U42 306 aaKnown RBP eCLIP24.85■■□□□ 1.57
ARHGAP40-201ENST00000243967 CHIC1Q5VXU3 224 aa24.83■■□□□ 1.57
ARHGAP40-201ENST00000243967 TOP2AP11388 1531 aaKnown RBP24.67■■□□□ 1.54
ARHGAP40-201ENST00000243967 PEG3Q9GZU2 1588 aa24.56■■□□□ 1.52
ARHGAP40-201ENST00000243967 SMARCA2P51531 1590 aa24.47■■□□□ 1.51
ARHGAP40-201ENST00000243967 EIF4G1Q04637 1599 aaKnown RBP24.43■■□□□ 1.5
ARHGAP40-201ENST00000243967 CCDC88BA6NC98 1476 aa24.38■■□□□ 1.49
ARHGAP40-201ENST00000243967 ATAD2BQ9ULI0 1458 aa24.36■■□□□ 1.49
ARHGAP40-201ENST00000243967 BAZ1BQ9UIG0 1483 aaKnown RBP24.28■■□□□ 1.48
ARHGAP40-201ENST00000243967 TRIM41Q8WV44 630 aa24.21■■□□□ 1.47
ARHGAP40-201ENST00000243967 HMGXB3Q12766 1538 aa24.13■■□□□ 1.45
ARHGAP40-201ENST00000243967 ABCC8Q09428 1581 aa24.06■■□□□ 1.44
ARHGAP40-201ENST00000243967 NCAPD3P42695 1498 aa24.05■■□□□ 1.44
ARHGAP40-201ENST00000243967 LOC105371045A0A1W2PR82 267 aa23.91■■□□□ 1.42
ARHGAP40-201ENST00000243967 CC2D2AQ9P2K1 1620 aa23.88■■□□□ 1.41
ARHGAP40-201ENST00000243967 FAM9AQ8IZU1 332 aaPredicted RBP23.82■■□□□ 1.4
ARHGAP40-201ENST00000243967 WRNQ14191 1432 aaPredicted RBP eCLIP23.78■■□□□ 1.4
ARHGAP40-201ENST00000243967 SYNJ1O43426 1573 aa23.75■■□□□ 1.39
ARHGAP40-201ENST00000243967 PRDM2Q13029 1718 aa23.74■■□□□ 1.39
ARHGAP40-201ENST00000243967 CFTRP13569 1480 aa23.64■■□□□ 1.38
ARHGAP40-201ENST00000243967 BIVM-ERCC5R4GMW8 1640 aa23.61■■□□□ 1.37
ARHGAP40-201ENST00000243967 TOP2BQ02880 1626 aa23.6■■□□□ 1.37
ARHGAP40-201ENST00000243967 SOGA1O94964 1423 aa23.6■■□□□ 1.37
ARHGAP40-201ENST00000243967 EEA1Q15075 1411 aa23.58■■□□□ 1.37
ARHGAP40-201ENST00000243967 EHMT2Q96KQ7 1210 aa23.52■■□□□ 1.36
ARHGAP40-201ENST00000243967 RUSC2Q8N2Y8 1516 aa23.5■■□□□ 1.35
ARHGAP40-201ENST00000243967 CADPSQ9ULU8 1353 aa23.46■■□□□ 1.35
ARHGAP40-201ENST00000243967 CUX1P39880 1505 aa23.45■■□□□ 1.34
ARHGAP40-201ENST00000243967 CSRNP3Q8WYN3 585 aa23.38■■□□□ 1.33
ARHGAP40-201ENST00000243967 KIF21BO75037 1637 aa23.35■■□□□ 1.33
ARHGAP40-201ENST00000243967 GOLGA3Q08378 1498 aa23.32■■□□□ 1.32
ARHGAP40-201ENST00000243967 CEP164Q9UPV0 1460 aa23.28■■□□□ 1.32
ARHGAP40-201ENST00000243967 LAMC3Q9Y6N6 1575 aa23.27■■□□□ 1.32
ARHGAP40-201ENST00000243967 FANCD2Q9BXW9 1451 aa23.26■■□□□ 1.31
ARHGAP40-201ENST00000243967 NESP48681 1621 aa23.25■■□□□ 1.31
ARHGAP40-201ENST00000243967 TNIKQ9UKE5 1360 aa23.24■■□□□ 1.31
ARHGAP40-201ENST00000243967 CEP162Q5TB80 1403 aa23.21■■□□□ 1.31
ARHGAP40-201ENST00000243967 PCGF6Q9BYE7 350 aa23.18■■□□□ 1.3
ARHGAP40-201ENST00000243967 DNMBPQ6XZF7 1577 aa23.15■■□□□ 1.3
ARHGAP40-201ENST00000243967 UBTFP17480 764 aaKnown RBP23.15■■□□□ 1.3
ARHGAP40-201ENST00000243967 FGD5Q6ZNL6 1462 aa23.14■■□□□ 1.3
ARHGAP40-201ENST00000243967 KIF27Q86VH2 1401 aa23.14■■□□□ 1.3
ARHGAP40-201ENST00000243967 RAPGEF2Q9Y4G8 1499 aa23.12■■□□□ 1.29
ARHGAP40-201ENST00000243967 ERICH3Q5RHP9 1530 aa23.11■■□□□ 1.29
ARHGAP40-201ENST00000243967 DNAJC5BQ9UF47 199 aa23.08■■□□□ 1.29
ARHGAP40-201ENST00000243967 KIF21AQ7Z4S6 1674 aa23.07■■□□□ 1.28
ARHGAP40-201ENST00000243967 TRIM26Q12899 539 aaPredicted RBP23.06■■□□□ 1.28
ARHGAP40-201ENST00000243967 TOPBP1Q92547 1522 aa23.06■■□□□ 1.28
ARHGAP40-201ENST00000243967 PRXQ9BXM0 1461 aa23.06■■□□□ 1.28
ARHGAP40-201ENST00000243967 CUX2O14529 1486 aa23.04■■□□□ 1.28
ARHGAP40-201ENST00000243967 PDS5BQ9NTI5 1447 aa23.01■■□□□ 1.27
ARHGAP40-201ENST00000243967 URB2Q14146 1524 aaKnown RBP22.97■■□□□ 1.27
ARHGAP40-201ENST00000243967 POLA1P09884 1462 aaPredicted RBP22.97■■□□□ 1.27
ARHGAP40-201ENST00000243967 CLIP1P30622 1438 aa22.94■■□□□ 1.26
ARHGAP40-201ENST00000243967 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
ARHGAP40-201ENST00000243967 ABCA10Q8WWZ4 1543 aa22.91■■□□□ 1.26
ARHGAP40-201ENST00000243967 RAD54L2Q9Y4B4 1467 aa22.89■■□□□ 1.26
ARHGAP40-201ENST00000243967 IGF1RP08069 1367 aa22.85■■□□□ 1.25
ARHGAP40-201ENST00000243967 PPARGC1BQ86YN6 1023 aaKnown RBP22.82■■□□□ 1.24
ARHGAP40-201ENST00000243967 CUL7Q14999 1698 aa22.79■■□□□ 1.24
ARHGAP40-201ENST00000243967 VPS8Q8N3P4 1428 aa22.79■■□□□ 1.24
ARHGAP40-201ENST00000243967 ABCA5Q8WWZ7 1642 aa22.78■■□□□ 1.24
ARHGAP40-201ENST00000243967 CARMIL1Q5VZK9 1371 aa22.76■■□□□ 1.23
ARHGAP40-201ENST00000243967 HRCP23327 699 aa22.75■■□□□ 1.23
ARHGAP40-201ENST00000243967 MRC2Q9UBG0 1479 aa22.74■■□□□ 1.23
ARHGAP40-201ENST00000243967 RANGAP1P46060 587 aaPredicted RBP22.73■■□□□ 1.23
ARHGAP40-201ENST00000243967 TARBP1Q13395 1621 aaKnown RBP22.73■■□□□ 1.23
ARHGAP40-201ENST00000243967 ARAP1Q96P48 1450 aa22.71■■□□□ 1.23
ARHGAP40-201ENST00000243967 CTTNBP2Q8WZ74 1663 aa22.66■■□□□ 1.22
ARHGAP40-201ENST00000243967 GAPVD1Q14C86 1478 aa22.64■■□□□ 1.21
ARHGAP40-201ENST00000243967 WDR62O43379 1518 aa22.64■■□□□ 1.21
ARHGAP40-201ENST00000243967 PBRM1Q86U86 1689 aa22.63■■□□□ 1.21
ARHGAP40-201ENST00000243967 ARHGAP35Q9NRY4 1499 aa22.63■■□□□ 1.21
ARHGAP40-201ENST00000243967 TTBK1Q5TCY1 1321 aaPredicted RBP22.62■■□□□ 1.21
ARHGAP40-201ENST00000243967 TDRD9Q8NDG6 1382 aaKnown RBP22.61■■□□□ 1.21
ARHGAP40-201ENST00000243967 ERCC6Q03468 1493 aa22.56■■□□□ 1.2
ARHGAP40-201ENST00000243967 THOC2Q8NI27 1593 aaKnown RBP22.55■■□□□ 1.2
ARHGAP40-201ENST00000243967 APLP2Q06481 763 aa22.52■■□□□ 1.2
ARHGAP40-201ENST00000243967 IFT140Q96RY7 1462 aa22.5■■□□□ 1.19
ARHGAP40-201ENST00000243967 EFCAB5A4FU69 1503 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms