RNA–Protein interactions for RNA: ENST00000239849.8

TNFSF11-201, Transcript of TNF superfamily member 11, humanhuman

TSL 5 BASIC

Gene TNFSF11, Length 911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-201ENST00000239849 NISCHQ9Y2I1 1504 aa33.41■■■□□ 2.94
TNFSF11-201ENST00000239849 ABCC9O60706 1549 aa31.18■■■□□ 2.58
TNFSF11-201ENST00000239849 CCDC180Q9P1Z9 1646 aa30.4■■■□□ 2.46
TNFSF11-201ENST00000239849 DNAJC5BQ9UF47 199 aa29.94■■■□□ 2.38
TNFSF11-201ENST00000239849 RB1CC1Q8TDY2 1594 aa29.4■■■□□ 2.3
TNFSF11-201ENST00000239849 NACADO15069 1562 aa28.99■■■□□ 2.23
TNFSF11-201ENST00000239849 PABPN1Q86U42 306 aaKnown RBP eCLIP28.86■■■□□ 2.21
TNFSF11-201ENST00000239849 DCAF8L2P0C7V8 631 aa28.57■■■□□ 2.16
TNFSF11-201ENST00000239849 UNC13AQ9UPW8 1703 aa28.49■■■□□ 2.15
TNFSF11-201ENST00000239849 BICRAQ9NZM4 1560 aa28.43■■■□□ 2.14
TNFSF11-201ENST00000239849 MYO15BQ96JP2 1530 aa28.35■■■□□ 2.13
TNFSF11-201ENST00000239849 DNAJC5Q9H3Z4 198 aa28.31■■■□□ 2.12
TNFSF11-201ENST00000239849 CECR2Q9BXF3 1484 aa28.25■■■□□ 2.11
TNFSF11-201ENST00000239849 SHROOM4Q9ULL8 1493 aa28.21■■■□□ 2.11
TNFSF11-201ENST00000239849 CC2D2AQ9P2K1 1620 aa28.12■■■□□ 2.09
TNFSF11-201ENST00000239849 EIF4G1Q04637 1599 aaKnown RBP27.88■■■□□ 2.05
TNFSF11-201ENST00000239849 DCAF1Q9Y4B6 1507 aa27.63■■■□□ 2.01
TNFSF11-201ENST00000239849 SCRIBQ14160 1630 aa27.53■■■□□ 2
TNFSF11-201ENST00000239849 ZCCHC6Q5VYS8 1495 aaKnown RBP27.5■■□□□ 1.99
TNFSF11-201ENST00000239849 CUX2O14529 1486 aa27.38■■□□□ 1.97
TNFSF11-201ENST00000239849 ERCC6Q03468 1493 aa27.09■■□□□ 1.93
TNFSF11-201ENST00000239849 NCAPD3P42695 1498 aa26.76■■□□□ 1.87
TNFSF11-201ENST00000239849 TRIM41Q8WV44 630 aa26.65■■□□□ 1.86
TNFSF11-201ENST00000239849 ATAD2BQ9ULI0 1458 aa26.51■■□□□ 1.83
TNFSF11-201ENST00000239849 HMGXB3Q12766 1538 aa26.49■■□□□ 1.83
TNFSF11-201ENST00000239849 NESP48681 1621 aa26.47■■□□□ 1.83
TNFSF11-201ENST00000239849 SMARCA2P51531 1590 aa26.46■■□□□ 1.83
TNFSF11-201ENST00000239849 THOC2Q8NI27 1593 aaKnown RBP26.44■■□□□ 1.82
TNFSF11-201ENST00000239849 LAMC3Q9Y6N6 1575 aa26.3■■□□□ 1.8
TNFSF11-201ENST00000239849 BAZ1BQ9UIG0 1483 aaKnown RBP26.23■■□□□ 1.79
TNFSF11-201ENST00000239849 PDS5BQ9NTI5 1447 aa26.23■■□□□ 1.79
TNFSF11-201ENST00000239849 SMARCA4P51532 1647 aa26.22■■□□□ 1.79
TNFSF11-201ENST00000239849 KIF21AQ7Z4S6 1674 aa26.09■■□□□ 1.77
TNFSF11-201ENST00000239849 BAZ1AQ9NRL2 1556 aaPredicted RBP26.05■■□□□ 1.76
TNFSF11-201ENST00000239849 PEG3Q9GZU2 1588 aa26.03■■□□□ 1.76
TNFSF11-201ENST00000239849 MRC2Q9UBG0 1479 aa25.99■■□□□ 1.75
TNFSF11-201ENST00000239849 OSCARQ8IYS5 282 aa25.96■■□□□ 1.75
TNFSF11-201ENST00000239849 WDR62O43379 1518 aa25.94■■□□□ 1.74
TNFSF11-201ENST00000239849 CADPSQ9ULU8 1353 aa25.9■■□□□ 1.74
TNFSF11-201ENST00000239849 CEP164Q9UPV0 1460 aa25.72■■□□□ 1.71
TNFSF11-201ENST00000239849 MROH2BQ7Z745 1585 aa25.66■■□□□ 1.7
TNFSF11-201ENST00000239849 RIMBP3CA6NJZ7 1639 aa25.6■■□□□ 1.69
TNFSF11-201ENST00000239849 RIMBP3BA6NNM3 1639 aa25.6■■□□□ 1.69
TNFSF11-201ENST00000239849 RIMBP3Q9UFD9 1639 aa25.6■■□□□ 1.69
TNFSF11-201ENST00000239849 FANCD2Q9BXW9 1451 aa25.59■■□□□ 1.69
TNFSF11-201ENST00000239849 ARHGEF11O15085 1522 aa25.47■■□□□ 1.67
TNFSF11-201ENST00000239849 CFTRP13569 1480 aa25.41■■□□□ 1.66
TNFSF11-201ENST00000239849 TRHP20396 242 aaPredicted RBP25.4■■□□□ 1.66
TNFSF11-201ENST00000239849 AEBP2Q6ZN18 517 aaPredicted RBP25.38■■□□□ 1.65
TNFSF11-201ENST00000239849 URB2Q14146 1524 aaKnown RBP25.37■■□□□ 1.65
TNFSF11-201ENST00000239849 CYB5RLQ6IPT4 315 aa25.35■■□□□ 1.65
TNFSF11-201ENST00000239849 WIZO95785 1651 aa25.27■■□□□ 1.64
TNFSF11-201ENST00000239849 IFT140Q96RY7 1462 aa25.26■■□□□ 1.63
TNFSF11-201ENST00000239849 ZNF608Q9ULD9 1512 aaPredicted RBP25.17■■□□□ 1.62
TNFSF11-201ENST00000239849 ARAP1Q96P48 1450 aa25.13■■□□□ 1.61
TNFSF11-201ENST00000239849 RSF1Q96T23 1441 aaPredicted RBP25.12■■□□□ 1.61
TNFSF11-201ENST00000239849 EIF4G3O43432 1585 aaKnown RBP25.03■■□□□ 1.6
TNFSF11-201ENST00000239849 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
TNFSF11-201ENST00000239849 ABCC8Q09428 1581 aa25.01■■□□□ 1.59
TNFSF11-201ENST00000239849 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
TNFSF11-201ENST00000239849 TOPBP1Q92547 1522 aa24.97■■□□□ 1.59
TNFSF11-201ENST00000239849 FBLN2P98095 1184 aa24.94■■□□□ 1.58
TNFSF11-201ENST00000239849 CHD1O14646 1710 aa24.94■■□□□ 1.58
TNFSF11-201ENST00000239849 AQRO60306 1485 aaKnown RBP eCLIP24.87■■□□□ 1.57
TNFSF11-201ENST00000239849 DNMBPQ6XZF7 1577 aa24.83■■□□□ 1.57
TNFSF11-201ENST00000239849 TARBP1Q13395 1621 aaKnown RBP24.79■■□□□ 1.56
TNFSF11-201ENST00000239849 CLASP1Q7Z460 1538 aa24.72■■□□□ 1.55
TNFSF11-201ENST00000239849 SYNJ1O43426 1573 aa24.7■■□□□ 1.54
TNFSF11-201ENST00000239849 CCDC88BA6NC98 1476 aa24.7■■□□□ 1.54
TNFSF11-201ENST00000239849 POLA1P09884 1462 aaPredicted RBP24.66■■□□□ 1.54
TNFSF11-201ENST00000239849 CHMP7Q8WUX9 453 aaPredicted RBP24.66■■□□□ 1.54
TNFSF11-201ENST00000239849 WDR97A6NE52 1622 aa24.63■■□□□ 1.53
TNFSF11-201ENST00000239849 SNAPC4Q5SXM2 1469 aa24.61■■□□□ 1.53
TNFSF11-201ENST00000239849 MAGI1Q96QZ7 1491 aaPredicted RBP24.59■■□□□ 1.53
TNFSF11-201ENST00000239849 TDRD9Q8NDG6 1382 aaKnown RBP24.58■■□□□ 1.53
TNFSF11-201ENST00000239849 SOGA1O94964 1423 aa24.58■■□□□ 1.53
TNFSF11-201ENST00000239849 GAPVD1Q14C86 1478 aa24.57■■□□□ 1.52
TNFSF11-201ENST00000239849 RAD54L2Q9Y4B4 1467 aa24.53■■□□□ 1.52
TNFSF11-201ENST00000239849 SYNJ2O15056 1496 aa24.51■■□□□ 1.51
TNFSF11-201ENST00000239849 GRIN2BQ13224 1484 aa24.49■■□□□ 1.51
TNFSF11-201ENST00000239849 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
TNFSF11-201ENST00000239849 ILDR1Q86SU0 546 aaPredicted RBP24.28■■□□□ 1.48
TNFSF11-201ENST00000239849 PBRM1Q86U86 1689 aa24.21■■□□□ 1.47
TNFSF11-201ENST00000239849 CUX1P39880 1505 aa24.17■■□□□ 1.46
TNFSF11-201ENST00000239849 ERCC6L2Q5T890 1561 aa24.16■■□□□ 1.46
TNFSF11-201ENST00000239849 CEP170Q5SW79 1584 aa24.14■■□□□ 1.45
TNFSF11-201ENST00000239849 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
TNFSF11-201ENST00000239849 KIF13AQ9H1H9 1805 aa24.12■■□□□ 1.45
TNFSF11-201ENST00000239849 ABCA10Q8WWZ4 1543 aa24.1■■□□□ 1.45
TNFSF11-201ENST00000239849 NUP160Q12769 1436 aa24.1■■□□□ 1.45
TNFSF11-201ENST00000239849 ABCA5Q8WWZ7 1642 aa24.09■■□□□ 1.45
TNFSF11-201ENST00000239849 KDM4FA0A1W2PPD8 638 aa24.07■■□□□ 1.44
TNFSF11-201ENST00000239849 FAM69CQ0P6D2 419 aa24.06■■□□□ 1.44
TNFSF11-201ENST00000239849 SHROOM2Q13796 1616 aa24.05■■□□□ 1.44
TNFSF11-201ENST00000239849 ABCC10Q5T3U5 1492 aa24.05■■□□□ 1.44
TNFSF11-201ENST00000239849 NPM1P06748 294 aaKnown RBP eCLIP24.03■■□□□ 1.44
TNFSF11-201ENST00000239849 ADAMTS12P58397 1594 aa23.98■■□□□ 1.43
TNFSF11-201ENST00000239849 KDM6BO15054 1643 aa23.97■■□□□ 1.43
TNFSF11-201ENST00000239849 MAPKBP1O60336 1514 aa23.95■■□□□ 1.43
TNFSF11-201ENST00000239849 FHAD1B1AJZ9 1412 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms