RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 NISCHQ9Y2I1 1504 aa21.2■□□□□ 0.98
IFT43-201ENST00000238628 ABCC9O60706 1549 aa20.26■□□□□ 0.83
IFT43-201ENST00000238628 DNAJC5BQ9UF47 199 aa19.77■□□□□ 0.76
IFT43-201ENST00000238628 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
IFT43-201ENST00000238628 RB1CC1Q8TDY2 1594 aa18.86■□□□□ 0.61
IFT43-201ENST00000238628 PABPN1Q86U42 306 aaKnown RBP eCLIP18.79■□□□□ 0.6
IFT43-201ENST00000238628 DNAJC5Q9H3Z4 198 aa18.78■□□□□ 0.6
IFT43-201ENST00000238628 NACADO15069 1562 aa18.51■□□□□ 0.55
IFT43-201ENST00000238628 DCAF8L2P0C7V8 631 aa18.46■□□□□ 0.55
IFT43-201ENST00000238628 UNC13AQ9UPW8 1703 aa18.37■□□□□ 0.53
IFT43-201ENST00000238628 CECR2Q9BXF3 1484 aa18.33■□□□□ 0.52
IFT43-201ENST00000238628 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
IFT43-201ENST00000238628 CC2D2AQ9P2K1 1620 aa18.2■□□□□ 0.5
IFT43-201ENST00000238628 SHROOM4Q9ULL8 1493 aa17.95■□□□□ 0.46
IFT43-201ENST00000238628 EIF4G1Q04637 1599 aaKnown RBP17.95■□□□□ 0.46
IFT43-201ENST00000238628 MYO15BQ96JP2 1530 aa17.94■□□□□ 0.46
IFT43-201ENST00000238628 AEBP2Q6ZN18 517 aaPredicted RBP17.93■□□□□ 0.46
IFT43-201ENST00000238628 CUX2O14529 1486 aa17.76■□□□□ 0.43
IFT43-201ENST00000238628 TRIM41Q8WV44 630 aa17.67■□□□□ 0.42
IFT43-201ENST00000238628 SCRIBQ14160 1630 aa17.62■□□□□ 0.41
IFT43-201ENST00000238628 ERCC6Q03468 1493 aa17.57■□□□□ 0.4
IFT43-201ENST00000238628 DCAF1Q9Y4B6 1507 aa17.42■□□□□ 0.38
IFT43-201ENST00000238628 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
IFT43-201ENST00000238628 NESP48681 1621 aa17.14■□□□□ 0.33
IFT43-201ENST00000238628 NCAPD3P42695 1498 aa17.12■□□□□ 0.33
IFT43-201ENST00000238628 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
IFT43-201ENST00000238628 SMARCA2P51531 1590 aa16.97■□□□□ 0.31
IFT43-201ENST00000238628 ATAD2BQ9ULI0 1458 aa16.96■□□□□ 0.31
IFT43-201ENST00000238628 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
IFT43-201ENST00000238628 HMGXB3Q12766 1538 aa16.87■□□□□ 0.29
IFT43-201ENST00000238628 PDS5BQ9NTI5 1447 aa16.85■□□□□ 0.29
IFT43-201ENST00000238628 LAMC3Q9Y6N6 1575 aa16.85■□□□□ 0.29
IFT43-201ENST00000238628 KIF21AQ7Z4S6 1674 aa16.84■□□□□ 0.29
IFT43-201ENST00000238628 BAZ1AQ9NRL2 1556 aaPredicted RBP16.82■□□□□ 0.28
IFT43-201ENST00000238628 BAZ1BQ9UIG0 1483 aaKnown RBP16.76■□□□□ 0.27
IFT43-201ENST00000238628 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
IFT43-201ENST00000238628 MRC2Q9UBG0 1479 aa16.72■□□□□ 0.27
IFT43-201ENST00000238628 SMARCA4P51532 1647 aa16.69■□□□□ 0.26
IFT43-201ENST00000238628 RIMBP3CA6NJZ7 1639 aa16.68■□□□□ 0.26
IFT43-201ENST00000238628 RIMBP3BA6NNM3 1639 aa16.68■□□□□ 0.26
IFT43-201ENST00000238628 RIMBP3Q9UFD9 1639 aa16.68■□□□□ 0.26
IFT43-201ENST00000238628 WDR62O43379 1518 aa16.66■□□□□ 0.26
IFT43-201ENST00000238628 CHIC1Q5VXU3 224 aa16.62■□□□□ 0.25
IFT43-201ENST00000238628 CYB5RLQ6IPT4 315 aa16.6■□□□□ 0.25
IFT43-201ENST00000238628 CADPSQ9ULU8 1353 aa16.6■□□□□ 0.25
IFT43-201ENST00000238628 ARHGEF11O15085 1522 aa16.55■□□□□ 0.24
IFT43-201ENST00000238628 PEG3Q9GZU2 1588 aa16.5■□□□□ 0.23
IFT43-201ENST00000238628 CEP164Q9UPV0 1460 aa16.49■□□□□ 0.23
IFT43-201ENST00000238628 FANCD2Q9BXW9 1451 aa16.4■□□□□ 0.22
IFT43-201ENST00000238628 MROH2BQ7Z745 1585 aa16.34■□□□□ 0.21
IFT43-201ENST00000238628 ARAP1Q96P48 1450 aa16.33■□□□□ 0.2
IFT43-201ENST00000238628 URB2Q14146 1524 aaKnown RBP16.29■□□□□ 0.2
IFT43-201ENST00000238628 ZNF608Q9ULD9 1512 aaPredicted RBP16.25■□□□□ 0.19
IFT43-201ENST00000238628 ILDR1Q86SU0 546 aaPredicted RBP16.22■□□□□ 0.19
IFT43-201ENST00000238628 CFTRP13569 1480 aa16.2■□□□□ 0.18
IFT43-201ENST00000238628 IFT140Q96RY7 1462 aa16.19■□□□□ 0.18
IFT43-201ENST00000238628 FBLN2P98095 1184 aa16.19■□□□□ 0.18
IFT43-201ENST00000238628 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
IFT43-201ENST00000238628 CHD1O14646 1710 aa16.11■□□□□ 0.17
IFT43-201ENST00000238628 WIZO95785 1651 aa16.09■□□□□ 0.17
IFT43-201ENST00000238628 EIF4G3O43432 1585 aaKnown RBP16.07■□□□□ 0.16
IFT43-201ENST00000238628 AQRO60306 1485 aaKnown RBP eCLIP16.03■□□□□ 0.16
IFT43-201ENST00000238628 TOPBP1Q92547 1522 aa15.98■□□□□ 0.15
IFT43-201ENST00000238628 CHMP7Q8WUX9 453 aaPredicted RBP15.9■□□□□ 0.14
IFT43-201ENST00000238628 ABCC8Q09428 1581 aa15.9■□□□□ 0.14
IFT43-201ENST00000238628 CLASP1Q7Z460 1538 aa15.89■□□□□ 0.13
IFT43-201ENST00000238628 PRDM2Q13029 1718 aa15.88■□□□□ 0.13
IFT43-201ENST00000238628 GAPVD1Q14C86 1478 aa15.86■□□□□ 0.13
IFT43-201ENST00000238628 SYNJ1O43426 1573 aa15.86■□□□□ 0.13
IFT43-201ENST00000238628 TARBP1Q13395 1621 aaKnown RBP15.86■□□□□ 0.13
IFT43-201ENST00000238628 DNMBPQ6XZF7 1577 aa15.83■□□□□ 0.12
IFT43-201ENST00000238628 KDM4FA0A1W2PPD8 638 aa15.82■□□□□ 0.12
IFT43-201ENST00000238628 TDRD9Q8NDG6 1382 aaKnown RBP15.82■□□□□ 0.12
IFT43-201ENST00000238628 TOP2AP11388 1531 aaKnown RBP15.82■□□□□ 0.12
IFT43-201ENST00000238628 SNAPC4Q5SXM2 1469 aa15.81■□□□□ 0.12
IFT43-201ENST00000238628 POLA1P09884 1462 aaPredicted RBP15.76■□□□□ 0.11
IFT43-201ENST00000238628 RAD54L2Q9Y4B4 1467 aa15.75■□□□□ 0.11
IFT43-201ENST00000238628 SOGA1O94964 1423 aa15.73■□□□□ 0.11
IFT43-201ENST00000238628 MAGI1Q96QZ7 1491 aaPredicted RBP15.71■□□□□ 0.11
IFT43-201ENST00000238628 CCDC88BA6NC98 1476 aa15.69■□□□□ 0.1
IFT43-201ENST00000238628 SYNJ2O15056 1496 aa15.69■□□□□ 0.1
IFT43-201ENST00000238628 KIF13AQ9H1H9 1805 aa15.66■□□□□ 0.1
IFT43-201ENST00000238628 GRIN2BQ13224 1484 aa15.65■□□□□ 0.1
IFT43-201ENST00000238628 FAM69CQ0P6D2 419 aa15.64■□□□□ 0.09
IFT43-201ENST00000238628 ERCC6L2Q5T890 1561 aa15.62■□□□□ 0.09
IFT43-201ENST00000238628 WDR97A6NE52 1622 aa15.62■□□□□ 0.09
IFT43-201ENST00000238628 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
IFT43-201ENST00000238628 KDM6BO15054 1643 aa15.54■□□□□ 0.08
IFT43-201ENST00000238628 FBXO41Q8TF61 875 aa15.54■□□□□ 0.08
IFT43-201ENST00000238628 ABCC10Q5T3U5 1492 aa15.52■□□□□ 0.08
IFT43-201ENST00000238628 NPM1P06748 294 aaKnown RBP eCLIP15.52■□□□□ 0.08
IFT43-201ENST00000238628 CEP170Q5SW79 1584 aa15.51■□□□□ 0.07
IFT43-201ENST00000238628 HECW2Q9P2P5 1572 aa15.49■□□□□ 0.07
IFT43-201ENST00000238628 PBRM1Q86U86 1689 aa15.47■□□□□ 0.07
IFT43-201ENST00000238628 ADGRL1O94910 1474 aa15.45■□□□□ 0.06
IFT43-201ENST00000238628 GRIN2AQ12879 1464 aa15.44■□□□□ 0.06
IFT43-201ENST00000238628 DIP2BQ9P265 1576 aa15.42■□□□□ 0.06
IFT43-201ENST00000238628 TSPOAP1O95153 1857 aa15.41■□□□□ 0.06
IFT43-201ENST00000238628 NUP160Q12769 1436 aa15.4■□□□□ 0.06
IFT43-201ENST00000238628 SHROOM2Q13796 1616 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms