RNA–Protein interactions for RNA: ENST00000234701.7

CLCA1-201, Transcript of chloride channel accessory 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCA1, Length 3,310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1-201ENST00000234701 NISCHQ9Y2I1 1504 aa11.92□□□□□ -0.5
CLCA1-201ENST00000234701 CCDC180Q9P1Z9 1646 aa11.22□□□□□ -0.61
CLCA1-201ENST00000234701 MYO15BQ96JP2 1530 aa10.53□□□□□ -0.72
CLCA1-201ENST00000234701 NACADO15069 1562 aa10.38□□□□□ -0.75
CLCA1-201ENST00000234701 SHROOM4Q9ULL8 1493 aa10.38□□□□□ -0.75
CLCA1-201ENST00000234701 RB1CC1Q8TDY2 1594 aa10.36□□□□□ -0.75
CLCA1-201ENST00000234701 UNC13AQ9UPW8 1703 aa10.35□□□□□ -0.75
CLCA1-201ENST00000234701 ABCC9O60706 1549 aa10.35□□□□□ -0.75
CLCA1-201ENST00000234701 DCAF1Q9Y4B6 1507 aa10.28□□□□□ -0.76
CLCA1-201ENST00000234701 BICRAQ9NZM4 1560 aa10.14□□□□□ -0.79
CLCA1-201ENST00000234701 ZCCHC6Q5VYS8 1495 aaKnown RBP9.96□□□□□ -0.81
CLCA1-201ENST00000234701 CC2D2AQ9P2K1 1620 aa9.75□□□□□ -0.85
CLCA1-201ENST00000234701 EIF4G1Q04637 1599 aaKnown RBP9.75□□□□□ -0.85
CLCA1-201ENST00000234701 DNAJC5BQ9UF47 199 aa9.73□□□□□ -0.85
CLCA1-201ENST00000234701 AEBP2Q6ZN18 517 aaPredicted RBP9.69□□□□□ -0.86
CLCA1-201ENST00000234701 PEG3Q9GZU2 1588 aa9.62□□□□□ -0.87
CLCA1-201ENST00000234701 HMGXB3Q12766 1538 aa9.56□□□□□ -0.88
CLCA1-201ENST00000234701 SMARCA2P51531 1590 aa9.53□□□□□ -0.88
CLCA1-201ENST00000234701 SCRIBQ14160 1630 aa9.53□□□□□ -0.88
CLCA1-201ENST00000234701 CECR2Q9BXF3 1484 aa9.52□□□□□ -0.88
CLCA1-201ENST00000234701 CUX2O14529 1486 aa9.52□□□□□ -0.89
CLCA1-201ENST00000234701 CHIC1Q5VXU3 224 aa9.47□□□□□ -0.89
CLCA1-201ENST00000234701 NCAPD3P42695 1498 aa9.46□□□□□ -0.9
CLCA1-201ENST00000234701 THOC2Q8NI27 1593 aaKnown RBP9.42□□□□□ -0.9
CLCA1-201ENST00000234701 SMARCA4P51532 1647 aa9.4□□□□□ -0.91
CLCA1-201ENST00000234701 PRDM2Q13029 1718 aa9.38□□□□□ -0.91
CLCA1-201ENST00000234701 LAMC3Q9Y6N6 1575 aa9.36□□□□□ -0.91
CLCA1-201ENST00000234701 BAZ1AQ9NRL2 1556 aaPredicted RBP9.29□□□□□ -0.92
CLCA1-201ENST00000234701 PABPN1Q86U42 306 aaKnown RBP eCLIP9.28□□□□□ -0.92
CLCA1-201ENST00000234701 ATAD2BQ9ULI0 1458 aa9.28□□□□□ -0.92
CLCA1-201ENST00000234701 WDR62O43379 1518 aa9.22□□□□□ -0.93
CLCA1-201ENST00000234701 KIF21AQ7Z4S6 1674 aa9.21□□□□□ -0.93
CLCA1-201ENST00000234701 DNAJC5Q9H3Z4 198 aa9.18□□□□□ -0.94
CLCA1-201ENST00000234701 WDR97A6NE52 1622 aa9.15□□□□□ -0.95
CLCA1-201ENST00000234701 BAZ1BQ9UIG0 1483 aaKnown RBP9.06□□□□□ -0.96
CLCA1-201ENST00000234701 MRC2Q9UBG0 1479 aa9.03□□□□□ -0.96
CLCA1-201ENST00000234701 MROH2BQ7Z745 1585 aa9.02□□□□□ -0.96
CLCA1-201ENST00000234701 TOP2AP11388 1531 aaKnown RBP9.02□□□□□ -0.97
CLCA1-201ENST00000234701 CFTRP13569 1480 aa8.99□□□□□ -0.97
CLCA1-201ENST00000234701 PDS5BQ9NTI5 1447 aa8.98□□□□□ -0.97
CLCA1-201ENST00000234701 NESP48681 1621 aa8.94□□□□□ -0.98
CLCA1-201ENST00000234701 WIZO95785 1651 aa8.94□□□□□ -0.98
CLCA1-201ENST00000234701 ERCC6Q03468 1493 aa8.94□□□□□ -0.98
CLCA1-201ENST00000234701 CADPSQ9ULU8 1353 aa8.92□□□□□ -0.98
CLCA1-201ENST00000234701 EHMT2Q96KQ7 1210 aa8.92□□□□□ -0.98
CLCA1-201ENST00000234701 SLC24A1O60721 1099 aa8.92□□□□□ -0.98
CLCA1-201ENST00000234701 TARBP1Q13395 1621 aaKnown RBP8.9□□□□□ -0.98
CLCA1-201ENST00000234701 ABCC8Q09428 1581 aa8.88□□□□□ -0.99
CLCA1-201ENST00000234701 CEP164Q9UPV0 1460 aa8.87□□□□□ -0.99
CLCA1-201ENST00000234701 URB2Q14146 1524 aaKnown RBP8.85□□□□□ -0.99
CLCA1-201ENST00000234701 DNMBPQ6XZF7 1577 aa8.84□□□□□ -0.99
CLCA1-201ENST00000234701 RIMBP3CA6NJZ7 1639 aa8.82□□□□□ -1
CLCA1-201ENST00000234701 RIMBP3BA6NNM3 1639 aa8.82□□□□□ -1
CLCA1-201ENST00000234701 RIMBP3Q9UFD9 1639 aa8.82□□□□□ -1
CLCA1-201ENST00000234701 IFT140Q96RY7 1462 aa8.81□□□□□ -1
CLCA1-201ENST00000234701 CLASP1Q7Z460 1538 aa8.81□□□□□ -1
CLCA1-201ENST00000234701 FANCD2Q9BXW9 1451 aa8.81□□□□□ -1
CLCA1-201ENST00000234701 DCAF8L2P0C7V8 631 aa8.8□□□□□ -1
CLCA1-201ENST00000234701 EIF4G3O43432 1585 aaKnown RBP8.8□□□□□ -1
CLCA1-201ENST00000234701 CHD1O14646 1710 aa8.79□□□□□ -1
CLCA1-201ENST00000234701 RSF1Q96T23 1441 aaPredicted RBP8.76□□□□□ -1.01
CLCA1-201ENST00000234701 SHROOM2Q13796 1616 aa8.75□□□□□ -1.01
CLCA1-201ENST00000234701 PBRM1Q86U86 1689 aa8.74□□□□□ -1.01
CLCA1-201ENST00000234701 ABCA5Q8WWZ7 1642 aa8.73□□□□□ -1.01
CLCA1-201ENST00000234701 TOPBP1Q92547 1522 aa8.73□□□□□ -1.01
CLCA1-201ENST00000234701 BIVM-ERCC5R4GMW8 1640 aa8.71□□□□□ -1.02
CLCA1-201ENST00000234701 SENP3Q9H4L4 574 aaPredicted RBP8.68□□□□□ -1.02
CLCA1-201ENST00000234701 ARHGEF11O15085 1522 aa8.67□□□□□ -1.02
CLCA1-201ENST00000234701 CCDC88BA6NC98 1476 aa8.65□□□□□ -1.02
CLCA1-201ENST00000234701 PHF23Q9BUL5 403 aaPredicted RBP8.65□□□□□ -1.02
CLCA1-201ENST00000234701 MAGI1Q96QZ7 1491 aaPredicted RBP8.65□□□□□ -1.03
CLCA1-201ENST00000234701 SYNJ1O43426 1573 aa8.61□□□□□ -1.03
CLCA1-201ENST00000234701 PLPPR3Q6T4P5 718 aa8.61□□□□□ -1.03
CLCA1-201ENST00000234701 POLA1P09884 1462 aaPredicted RBP8.58□□□□□ -1.04
CLCA1-201ENST00000234701 ABCA10Q8WWZ4 1543 aa8.58□□□□□ -1.04
CLCA1-201ENST00000234701 ARAP1Q96P48 1450 aa8.57□□□□□ -1.04
CLCA1-201ENST00000234701 ADAMTS12P58397 1594 aa8.57□□□□□ -1.04
CLCA1-201ENST00000234701 ZNF608Q9ULD9 1512 aaPredicted RBP8.56□□□□□ -1.04
CLCA1-201ENST00000234701 KIF13AQ9H1H9 1805 aa8.56□□□□□ -1.04
CLCA1-201ENST00000234701 TOP2BQ02880 1626 aa8.55□□□□□ -1.04
CLCA1-201ENST00000234701 CUX1P39880 1505 aa8.55□□□□□ -1.04
CLCA1-201ENST00000234701 ERICH3Q5RHP9 1530 aa8.53□□□□□ -1.04
CLCA1-201ENST00000234701 SYNJ2O15056 1496 aa8.53□□□□□ -1.04
CLCA1-201ENST00000234701 NUP160Q12769 1436 aa8.51□□□□□ -1.05
CLCA1-201ENST00000234701 GRIN2BQ13224 1484 aa8.5□□□□□ -1.05
CLCA1-201ENST00000234701 MAPKBP1O60336 1514 aa8.48□□□□□ -1.05
CLCA1-201ENST00000234701 RUSC2Q8N2Y8 1516 aa8.48□□□□□ -1.05
CLCA1-201ENST00000234701 OSCARQ8IYS5 282 aa8.47□□□□□ -1.05
CLCA1-201ENST00000234701 CEP170Q5SW79 1584 aa8.46□□□□□ -1.05
CLCA1-201ENST00000234701 CUL7Q14999 1698 aa8.46□□□□□ -1.05
CLCA1-201ENST00000234701 FGD5Q6ZNL6 1462 aa8.46□□□□□ -1.06
CLCA1-201ENST00000234701 GLI2P10070 1586 aa8.44□□□□□ -1.06
CLCA1-201ENST00000234701 SNAPC4Q5SXM2 1469 aa8.44□□□□□ -1.06
CLCA1-201ENST00000234701 PPRC1Q5VV67 1664 aaKnown RBP8.4□□□□□ -1.06
CLCA1-201ENST00000234701 GRIN2AQ12879 1464 aa8.4□□□□□ -1.06
CLCA1-201ENST00000234701 RTN4Q9NQC3 1192 aaKnown RBP8.38□□□□□ -1.07
CLCA1-201ENST00000234701 DIP2BQ9P265 1576 aa8.37□□□□□ -1.07
CLCA1-201ENST00000234701 GAPVD1Q14C86 1478 aa8.36□□□□□ -1.07
CLCA1-201ENST00000234701 SOGA1O94964 1423 aa8.36□□□□□ -1.07
CLCA1-201ENST00000234701 MAP3K4Q9Y6R4 1608 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms