RNA–Protein interactions for RNA: ENST00000220659.10

BRF2-201, Transcript of BRF2, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF2, Length 2,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2-201ENST00000220659 NISCHQ9Y2I1 1504 aa27.8■■■□□ 2.04
BRF2-201ENST00000220659 CCDC180Q9P1Z9 1646 aa24.07■■□□□ 1.44
BRF2-201ENST00000220659 ZCCHC6Q5VYS8 1495 aaKnown RBP23.43■■□□□ 1.34
BRF2-201ENST00000220659 DCAF1Q9Y4B6 1507 aa23.02■■□□□ 1.28
BRF2-201ENST00000220659 DCAF8L2P0C7V8 631 aa22.93■■□□□ 1.26
BRF2-201ENST00000220659 SHROOM4Q9ULL8 1493 aa22.84■■□□□ 1.25
BRF2-201ENST00000220659 MYO15BQ96JP2 1530 aa22.63■■□□□ 1.21
BRF2-201ENST00000220659 ABCC9O60706 1549 aa22.59■■□□□ 1.21
BRF2-201ENST00000220659 NACADO15069 1562 aa22.36■■□□□ 1.17
BRF2-201ENST00000220659 SCRIBQ14160 1630 aa22.16■■□□□ 1.14
BRF2-201ENST00000220659 SUPT5HO00267 1087 aaKnown RBP22.15■■□□□ 1.14
BRF2-201ENST00000220659 RB1CC1Q8TDY2 1594 aa22.06■■□□□ 1.12
BRF2-201ENST00000220659 RSF1Q96T23 1441 aaPredicted RBP21.7■■□□□ 1.06
BRF2-201ENST00000220659 UNC13AQ9UPW8 1703 aa21.63■■□□□ 1.05
BRF2-201ENST00000220659 CECR2Q9BXF3 1484 aa21.57■■□□□ 1.04
BRF2-201ENST00000220659 MROH2BQ7Z745 1585 aa21.48■■□□□ 1.03
BRF2-201ENST00000220659 PABPN1Q86U42 306 aaKnown RBP eCLIP21.47■■□□□ 1.03
BRF2-201ENST00000220659 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
BRF2-201ENST00000220659 BAZ1AQ9NRL2 1556 aaPredicted RBP21.43■■□□□ 1.02
BRF2-201ENST00000220659 BICRAQ9NZM4 1560 aa21.43■■□□□ 1.02
BRF2-201ENST00000220659 WIZO95785 1651 aa21.31■■□□□ 1
BRF2-201ENST00000220659 SMARCA4P51532 1647 aa21.29■■□□□ 1
BRF2-201ENST00000220659 TOP2AP11388 1531 aaKnown RBP21.12■□□□□ 0.97
BRF2-201ENST00000220659 PEG3Q9GZU2 1588 aa21.05■□□□□ 0.96
BRF2-201ENST00000220659 SMARCA2P51531 1590 aa20.93■□□□□ 0.94
BRF2-201ENST00000220659 EIF4G1Q04637 1599 aaKnown RBP20.91■□□□□ 0.94
BRF2-201ENST00000220659 CCDC88BA6NC98 1476 aa20.91■□□□□ 0.94
BRF2-201ENST00000220659 ATAD2BQ9ULI0 1458 aa20.87■□□□□ 0.93
BRF2-201ENST00000220659 TRIM41Q8WV44 630 aa20.82■□□□□ 0.92
BRF2-201ENST00000220659 BAZ1BQ9UIG0 1483 aaKnown RBP20.75■□□□□ 0.91
BRF2-201ENST00000220659 NCAPD3P42695 1498 aa20.65■□□□□ 0.9
BRF2-201ENST00000220659 HMGXB3Q12766 1538 aa20.63■□□□□ 0.89
BRF2-201ENST00000220659 LOC105371045A0A1W2PR82 267 aa20.6■□□□□ 0.89
BRF2-201ENST00000220659 ABCC8Q09428 1581 aa20.54■□□□□ 0.88
BRF2-201ENST00000220659 FAM9AQ8IZU1 332 aaPredicted RBP20.41■□□□□ 0.86
BRF2-201ENST00000220659 WRNQ14191 1432 aaPredicted RBP eCLIP20.39■□□□□ 0.85
BRF2-201ENST00000220659 CC2D2AQ9P2K1 1620 aa20.33■□□□□ 0.85
BRF2-201ENST00000220659 DNAJC5BQ9UF47 199 aa20.32■□□□□ 0.84
BRF2-201ENST00000220659 SYNJ1O43426 1573 aa20.3■□□□□ 0.84
BRF2-201ENST00000220659 EEA1Q15075 1411 aa20.3■□□□□ 0.84
BRF2-201ENST00000220659 EHMT2Q96KQ7 1210 aa20.29■□□□□ 0.84
BRF2-201ENST00000220659 CFTRP13569 1480 aa20.28■□□□□ 0.84
BRF2-201ENST00000220659 SOGA1O94964 1423 aa20.25■□□□□ 0.83
BRF2-201ENST00000220659 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
BRF2-201ENST00000220659 BIVM-ERCC5R4GMW8 1640 aa20.18■□□□□ 0.82
BRF2-201ENST00000220659 PRDM2Q13029 1718 aa20.16■□□□□ 0.82
BRF2-201ENST00000220659 RUSC2Q8N2Y8 1516 aa20.15■□□□□ 0.82
BRF2-201ENST00000220659 CSRNP3Q8WYN3 585 aa20.14■□□□□ 0.81
BRF2-201ENST00000220659 CADPSQ9ULU8 1353 aa20.13■□□□□ 0.81
BRF2-201ENST00000220659 CUX1P39880 1505 aa20.07■□□□□ 0.8
BRF2-201ENST00000220659 TNIKQ9UKE5 1360 aa20.03■□□□□ 0.8
BRF2-201ENST00000220659 GOLGA3Q08378 1498 aa20.01■□□□□ 0.79
BRF2-201ENST00000220659 KIF21BO75037 1637 aa20.01■□□□□ 0.79
BRF2-201ENST00000220659 PCGF6Q9BYE7 350 aa19.98■□□□□ 0.79
BRF2-201ENST00000220659 CEP164Q9UPV0 1460 aa19.98■□□□□ 0.79
BRF2-201ENST00000220659 TRIM26Q12899 539 aaPredicted RBP19.94■□□□□ 0.78
BRF2-201ENST00000220659 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
BRF2-201ENST00000220659 FANCD2Q9BXW9 1451 aa19.89■□□□□ 0.78
BRF2-201ENST00000220659 UBTFP17480 764 aaKnown RBP19.87■□□□□ 0.77
BRF2-201ENST00000220659 LAMC3Q9Y6N6 1575 aa19.86■□□□□ 0.77
BRF2-201ENST00000220659 KIF27Q86VH2 1401 aa19.85■□□□□ 0.77
BRF2-201ENST00000220659 NESP48681 1621 aa19.85■□□□□ 0.77
BRF2-201ENST00000220659 HRCP23327 699 aa19.85■□□□□ 0.77
BRF2-201ENST00000220659 PRXQ9BXM0 1461 aa19.83■□□□□ 0.76
BRF2-201ENST00000220659 RAPGEF2Q9Y4G8 1499 aa19.82■□□□□ 0.76
BRF2-201ENST00000220659 ERICH3Q5RHP9 1530 aa19.82■□□□□ 0.76
BRF2-201ENST00000220659 FGD5Q6ZNL6 1462 aa19.78■□□□□ 0.76
BRF2-201ENST00000220659 DNMBPQ6XZF7 1577 aa19.78■□□□□ 0.76
BRF2-201ENST00000220659 TOPBP1Q92547 1522 aa19.72■□□□□ 0.75
BRF2-201ENST00000220659 CUX2O14529 1486 aa19.71■□□□□ 0.75
BRF2-201ENST00000220659 PDS5BQ9NTI5 1447 aa19.7■□□□□ 0.74
BRF2-201ENST00000220659 CLIP1P30622 1438 aa19.7■□□□□ 0.74
BRF2-201ENST00000220659 IGF1RP08069 1367 aa19.67■□□□□ 0.74
BRF2-201ENST00000220659 POLA1P09884 1462 aaPredicted RBP19.65■□□□□ 0.74
BRF2-201ENST00000220659 URB2Q14146 1524 aaKnown RBP19.64■□□□□ 0.73
BRF2-201ENST00000220659 ABCA10Q8WWZ4 1543 aa19.64■□□□□ 0.73
BRF2-201ENST00000220659 VPS8Q8N3P4 1428 aa19.58■□□□□ 0.73
BRF2-201ENST00000220659 RAD54L2Q9Y4B4 1467 aa19.58■□□□□ 0.72
BRF2-201ENST00000220659 KIF21AQ7Z4S6 1674 aa19.57■□□□□ 0.72
BRF2-201ENST00000220659 CARMIL1Q5VZK9 1371 aa19.56■□□□□ 0.72
BRF2-201ENST00000220659 RANGAP1P46060 587 aaPredicted RBP19.55■□□□□ 0.72
BRF2-201ENST00000220659 PPARGC1BQ86YN6 1023 aaKnown RBP19.55■□□□□ 0.72
BRF2-201ENST00000220659 WDR97A6NE52 1622 aa19.54■□□□□ 0.72
BRF2-201ENST00000220659 ARAP1Q96P48 1450 aa19.48■□□□□ 0.71
BRF2-201ENST00000220659 CUL7Q14999 1698 aa19.46■□□□□ 0.71
BRF2-201ENST00000220659 ABCA5Q8WWZ7 1642 aa19.44■□□□□ 0.7
BRF2-201ENST00000220659 MRC2Q9UBG0 1479 aa19.43■□□□□ 0.7
BRF2-201ENST00000220659 ARHGAP35Q9NRY4 1499 aa19.41■□□□□ 0.7
BRF2-201ENST00000220659 TARBP1Q13395 1621 aaKnown RBP19.41■□□□□ 0.7
BRF2-201ENST00000220659 TTBK1Q5TCY1 1321 aaPredicted RBP19.41■□□□□ 0.7
BRF2-201ENST00000220659 GAPVD1Q14C86 1478 aa19.38■□□□□ 0.69
BRF2-201ENST00000220659 TDRD9Q8NDG6 1382 aaKnown RBP19.35■□□□□ 0.69
BRF2-201ENST00000220659 APLP2Q06481 763 aa19.35■□□□□ 0.69
BRF2-201ENST00000220659 WDR62O43379 1518 aa19.33■□□□□ 0.68
BRF2-201ENST00000220659 ZEB1P37275 1124 aaPredicted RBP19.32■□□□□ 0.68
BRF2-201ENST00000220659 CTTNBP2Q8WZ74 1663 aa19.27■□□□□ 0.68
BRF2-201ENST00000220659 IFT140Q96RY7 1462 aa19.25■□□□□ 0.67
BRF2-201ENST00000220659 EFCAB5A4FU69 1503 aa19.24■□□□□ 0.67
BRF2-201ENST00000220659 ERCC6Q03468 1493 aa19.23■□□□□ 0.67
BRF2-201ENST00000220659 PBRM1Q86U86 1689 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms