RNA–Protein interactions for RNA: ENST00000217407.2

LBP-201, Transcript of lipopolysaccharide binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LBP, Length 1,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBP-201ENST00000217407 NISCHQ9Y2I1 1504 aa27.81■■■□□ 2.04
LBP-201ENST00000217407 CCDC180Q9P1Z9 1646 aa24.15■■□□□ 1.46
LBP-201ENST00000217407 ZCCHC6Q5VYS8 1495 aaKnown RBP23.38■■□□□ 1.33
LBP-201ENST00000217407 DCAF8L2P0C7V8 631 aa22.99■■□□□ 1.27
LBP-201ENST00000217407 DCAF1Q9Y4B6 1507 aa22.98■■□□□ 1.27
LBP-201ENST00000217407 SHROOM4Q9ULL8 1493 aa22.83■■□□□ 1.25
LBP-201ENST00000217407 ABCC9O60706 1549 aa22.73■■□□□ 1.23
LBP-201ENST00000217407 MYO15BQ96JP2 1530 aa22.65■■□□□ 1.22
LBP-201ENST00000217407 NACADO15069 1562 aa22.47■■□□□ 1.19
LBP-201ENST00000217407 SCRIBQ14160 1630 aa22.26■■□□□ 1.15
LBP-201ENST00000217407 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
LBP-201ENST00000217407 SUPT5HO00267 1087 aaKnown RBP22.07■■□□□ 1.12
LBP-201ENST00000217407 UNC13AQ9UPW8 1703 aa21.8■■□□□ 1.08
LBP-201ENST00000217407 RSF1Q96T23 1441 aaPredicted RBP21.64■■□□□ 1.06
LBP-201ENST00000217407 CECR2Q9BXF3 1484 aa21.6■■□□□ 1.05
LBP-201ENST00000217407 BICRAQ9NZM4 1560 aa21.56■■□□□ 1.04
LBP-201ENST00000217407 PABPN1Q86U42 306 aaKnown RBP eCLIP21.5■■□□□ 1.03
LBP-201ENST00000217407 MROH2BQ7Z745 1585 aa21.49■■□□□ 1.03
LBP-201ENST00000217407 BAZ1AQ9NRL2 1556 aaPredicted RBP21.45■■□□□ 1.02
LBP-201ENST00000217407 SMARCA4P51532 1647 aa21.33■■□□□ 1.01
LBP-201ENST00000217407 WIZO95785 1651 aa21.33■■□□□ 1
LBP-201ENST00000217407 CHIC1Q5VXU3 224 aa21.19■□□□□ 0.98
LBP-201ENST00000217407 TOP2AP11388 1531 aaKnown RBP21.1■□□□□ 0.97
LBP-201ENST00000217407 PEG3Q9GZU2 1588 aa21.06■□□□□ 0.96
LBP-201ENST00000217407 ATAD2BQ9ULI0 1458 aa20.95■□□□□ 0.94
LBP-201ENST00000217407 SMARCA2P51531 1590 aa20.95■□□□□ 0.94
LBP-201ENST00000217407 CCDC88BA6NC98 1476 aa20.91■□□□□ 0.94
LBP-201ENST00000217407 EIF4G1Q04637 1599 aaKnown RBP20.91■□□□□ 0.94
LBP-201ENST00000217407 BAZ1BQ9UIG0 1483 aaKnown RBP20.85■□□□□ 0.93
LBP-201ENST00000217407 NCAPD3P42695 1498 aa20.75■□□□□ 0.91
LBP-201ENST00000217407 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
LBP-201ENST00000217407 HMGXB3Q12766 1538 aa20.72■□□□□ 0.91
LBP-201ENST00000217407 CC2D2AQ9P2K1 1620 aa20.56■□□□□ 0.88
LBP-201ENST00000217407 ABCC8Q09428 1581 aa20.51■□□□□ 0.87
LBP-201ENST00000217407 LOC105371045A0A1W2PR82 267 aa20.41■□□□□ 0.86
LBP-201ENST00000217407 WRNQ14191 1432 aaPredicted RBP eCLIP20.37■□□□□ 0.85
LBP-201ENST00000217407 FAM9AQ8IZU1 332 aaPredicted RBP20.36■□□□□ 0.85
LBP-201ENST00000217407 CFTRP13569 1480 aa20.33■□□□□ 0.85
LBP-201ENST00000217407 SYNJ1O43426 1573 aa20.26■□□□□ 0.83
LBP-201ENST00000217407 CADPSQ9ULU8 1353 aa20.25■□□□□ 0.83
LBP-201ENST00000217407 PRDM2Q13029 1718 aa20.22■□□□□ 0.83
LBP-201ENST00000217407 TOP2BQ02880 1626 aa20.17■□□□□ 0.82
LBP-201ENST00000217407 SOGA1O94964 1423 aa20.17■□□□□ 0.82
LBP-201ENST00000217407 EEA1Q15075 1411 aa20.16■□□□□ 0.82
LBP-201ENST00000217407 BIVM-ERCC5R4GMW8 1640 aa20.14■□□□□ 0.81
LBP-201ENST00000217407 CUX1P39880 1505 aa20.08■□□□□ 0.81
LBP-201ENST00000217407 RUSC2Q8N2Y8 1516 aa20.08■□□□□ 0.81
LBP-201ENST00000217407 EHMT2Q96KQ7 1210 aa20.08■□□□□ 0.8
LBP-201ENST00000217407 CSRNP3Q8WYN3 585 aa20.06■□□□□ 0.8
LBP-201ENST00000217407 DNAJC5BQ9UF47 199 aa20.03■□□□□ 0.8
LBP-201ENST00000217407 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
LBP-201ENST00000217407 LAMC3Q9Y6N6 1575 aa20.01■□□□□ 0.79
LBP-201ENST00000217407 NESP48681 1621 aa20.01■□□□□ 0.79
LBP-201ENST00000217407 GOLGA3Q08378 1498 aa19.89■□□□□ 0.77
LBP-201ENST00000217407 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
LBP-201ENST00000217407 PDS5BQ9NTI5 1447 aa19.88■□□□□ 0.77
LBP-201ENST00000217407 KIF21BO75037 1637 aa19.87■□□□□ 0.77
LBP-201ENST00000217407 TNIKQ9UKE5 1360 aa19.87■□□□□ 0.77
LBP-201ENST00000217407 DNMBPQ6XZF7 1577 aa19.85■□□□□ 0.77
LBP-201ENST00000217407 KIF27Q86VH2 1401 aa19.85■□□□□ 0.77
LBP-201ENST00000217407 UBTFP17480 764 aaKnown RBP19.84■□□□□ 0.77
LBP-201ENST00000217407 FGD5Q6ZNL6 1462 aa19.84■□□□□ 0.77
LBP-201ENST00000217407 TOPBP1Q92547 1522 aa19.81■□□□□ 0.76
LBP-201ENST00000217407 CEP162Q5TB80 1403 aa19.77■□□□□ 0.75
LBP-201ENST00000217407 KIF21AQ7Z4S6 1674 aa19.75■□□□□ 0.75
LBP-201ENST00000217407 URB2Q14146 1524 aaKnown RBP19.75■□□□□ 0.75
LBP-201ENST00000217407 CUX2O14529 1486 aa19.75■□□□□ 0.75
LBP-201ENST00000217407 RAPGEF2Q9Y4G8 1499 aa19.75■□□□□ 0.75
LBP-201ENST00000217407 PCGF6Q9BYE7 350 aa19.74■□□□□ 0.75
LBP-201ENST00000217407 PRXQ9BXM0 1461 aa19.74■□□□□ 0.75
LBP-201ENST00000217407 POLA1P09884 1462 aaPredicted RBP19.72■□□□□ 0.75
LBP-201ENST00000217407 ERICH3Q5RHP9 1530 aa19.72■□□□□ 0.75
LBP-201ENST00000217407 RAD54L2Q9Y4B4 1467 aa19.67■□□□□ 0.74
LBP-201ENST00000217407 ABCA10Q8WWZ4 1543 aa19.67■□□□□ 0.74
LBP-201ENST00000217407 IGF1RP08069 1367 aa19.66■□□□□ 0.74
LBP-201ENST00000217407 TRIM26Q12899 539 aaPredicted RBP19.65■□□□□ 0.74
LBP-201ENST00000217407 MRC2Q9UBG0 1479 aa19.59■□□□□ 0.73
LBP-201ENST00000217407 CLIP1P30622 1438 aa19.59■□□□□ 0.73
LBP-201ENST00000217407 CARMIL1Q5VZK9 1371 aa19.57■□□□□ 0.72
LBP-201ENST00000217407 WDR97A6NE52 1622 aa19.56■□□□□ 0.72
LBP-201ENST00000217407 TARBP1Q13395 1621 aaKnown RBP19.49■□□□□ 0.71
LBP-201ENST00000217407 ERCC6Q03468 1493 aa19.48■□□□□ 0.71
LBP-201ENST00000217407 TDRD9Q8NDG6 1382 aaKnown RBP19.48■□□□□ 0.71
LBP-201ENST00000217407 ABCA5Q8WWZ7 1642 aa19.48■□□□□ 0.71
LBP-201ENST00000217407 RANGAP1P46060 587 aaPredicted RBP19.47■□□□□ 0.71
LBP-201ENST00000217407 CUL7Q14999 1698 aa19.47■□□□□ 0.71
LBP-201ENST00000217407 WDR62O43379 1518 aa19.47■□□□□ 0.71
LBP-201ENST00000217407 GAPVD1Q14C86 1478 aa19.46■□□□□ 0.71
LBP-201ENST00000217407 PPARGC1BQ86YN6 1023 aaKnown RBP19.45■□□□□ 0.7
LBP-201ENST00000217407 VPS8Q8N3P4 1428 aa19.43■□□□□ 0.7
LBP-201ENST00000217407 IFT140Q96RY7 1462 aa19.38■□□□□ 0.69
LBP-201ENST00000217407 THOC2Q8NI27 1593 aaKnown RBP19.37■□□□□ 0.69
LBP-201ENST00000217407 HRCP23327 699 aa19.36■□□□□ 0.69
LBP-201ENST00000217407 ARAP1Q96P48 1450 aa19.36■□□□□ 0.69
LBP-201ENST00000217407 AQRO60306 1485 aaKnown RBP eCLIP19.33■□□□□ 0.69
LBP-201ENST00000217407 ARHGAP35Q9NRY4 1499 aa19.32■□□□□ 0.68
LBP-201ENST00000217407 PBRM1Q86U86 1689 aa19.32■□□□□ 0.68
LBP-201ENST00000217407 APLP2Q06481 763 aa19.29■□□□□ 0.68
LBP-201ENST00000217407 GRIN2BQ13224 1484 aa19.28■□□□□ 0.68
LBP-201ENST00000217407 ZNF608Q9ULD9 1512 aaPredicted RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms