RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W DSE4P53753 1117 aa7.95□□□□□ -1.14
PRE2YPR103W FAR11P53917 953 aa7.95□□□□□ -1.14
PRE2YPR103W YMR074CQ04773 145 aa7.95□□□□□ -1.14
PRE2YPR103W TDA5Q06417 326 aaKnown RBP7.95□□□□□ -1.14
PRE2YPR103W SEA4P38164 1038 aa7.94□□□□□ -1.14
PRE2YPR103W YNR063WP53749 607 aa7.94□□□□□ -1.14
PRE2YPR103W RKM2Q03942 479 aa7.94□□□□□ -1.14
PRE2YPR103W TIF35Q04067 274 aaKnown RBP7.94□□□□□ -1.14
PRE2YPR103W TY1A-NL1Q12391 440 aaKnown RBP7.94□□□□□ -1.14
PRE2YPR103W SYP1P25623 870 aaKnown RBP7.93□□□□□ -1.14
PRE2YPR103W ABD1P32783 436 aaPredicted RBP7.93□□□□□ -1.14
PRE2YPR103W YJL049WP47048 450 aa7.93□□□□□ -1.14
PRE2YPR103W YPL062WQ02781 134 aa7.93□□□□□ -1.14
PRE2YPR103W NSE3Q05541 303 aa7.93□□□□□ -1.14
PRE2YPR103W YLR225CQ05948 407 aaKnown RBP7.93□□□□□ -1.14
PRE2YPR103W MOT2P34909 587 aaKnown RBP7.92□□□□□ -1.14
PRE2YPR103W BUD9P53226 547 aa7.92□□□□□ -1.14
PRE2YPR103W NCE103P53615 221 aa7.92□□□□□ -1.14
PRE2YPR103W YNR014WP53719 212 aa7.92□□□□□ -1.14
PRE2YPR103W YAR028WP39548 234 aa7.91□□□□□ -1.14
PRE2YPR103W ELA1P53861 379 aaPredicted RBP7.91□□□□□ -1.14
PRE2YPR103W THI72Q08579 599 aa7.91□□□□□ -1.14
PRE2YPR103W YLL054CQ12244 843 aa7.91□□□□□ -1.14
PRE2YPR103W DBP5P20449 482 aaKnown RBP7.9□□□□□ -1.14
PRE2YPR103W AGP1P25376 633 aa7.9□□□□□ -1.14
PRE2YPR103W STE5P32917 917 aa7.9□□□□□ -1.14
PRE2YPR103W ALG3P38179 458 aa7.9□□□□□ -1.14
PRE2YPR103W AOS1Q06624 347 aa7.9□□□□□ -1.14
PRE2YPR103W BDF2Q07442 638 aa7.9□□□□□ -1.14
PRE2YPR103W YOR223WQ12015 292 aa7.9□□□□□ -1.14
PRE2YPR103W YPL066WQ12194 479 aa7.9□□□□□ -1.14
PRE2YPR103W INO1P11986 533 aa7.89□□□□□ -1.15
PRE2YPR103W SRP40P32583 406 aaPredicted RBP7.89□□□□□ -1.15
PRE2YPR103W MCX1P38323 520 aaPredicted RBP7.89□□□□□ -1.15
PRE2YPR103W CNN1P43618 361 aa7.89□□□□□ -1.15
PRE2YPR103W DOT1Q04089 582 aaKnown RBP7.89□□□□□ -1.15
PRE2YPR103W SPO20Q04359 397 aa7.89□□□□□ -1.15
PRE2YPR103W TDA6Q06466 467 aa7.89□□□□□ -1.15
PRE2YPR103W AVO1Q08236 1176 aa7.89□□□□□ -1.15
PRE2YPR103W RAD4P14736 754 aa7.88□□□□□ -1.15
PRE2YPR103W PUF4P25339 888 aaKnown RBP RIP-Chip data7.88□□□□□ -1.15not detected
PRE2YPR103W MDJ1P35191 511 aa7.88□□□□□ -1.15
PRE2YPR103W MPH1P40562 993 aa7.88□□□□□ -1.15
PRE2YPR103W NAN1Q02931 896 aaKnown RBP7.88□□□□□ -1.15
PRE2YPR103W SBA1P28707 216 aaKnown RBP7.87□□□□□ -1.15
PRE2YPR103W VBA5P36172 582 aa7.87□□□□□ -1.15
PRE2YPR103W HUL5P53119 910 aa7.87□□□□□ -1.15
PRE2YPR103W PTC5Q12511 572 aa7.87□□□□□ -1.15
PRE2YPR103W STI1P15705 589 aaKnown RBP RIP-Chip data7.86□□□□□ -1.15not detected
PRE2YPR103W SFA1P32771 386 aa7.86□□□□□ -1.15
PRE2YPR103W GPT2P36148 743 aa7.86□□□□□ -1.15
PRE2YPR103W YBR184WP38299 523 aa7.86□□□□□ -1.15
PRE2YPR103W AIM44Q99299 758 aa7.86□□□□□ -1.15
PRE2YPR103W MLS1P30952 554 aa7.85□□□□□ -1.15
PRE2YPR103W YKL091CP33324 310 aaKnown RBP7.85□□□□□ -1.15
PRE2YPR103W ATG14P38270 344 aa7.85□□□□□ -1.15
PRE2YPR103W PRY1P47032 299 aa7.85□□□□□ -1.15
PRE2YPR103W SHE9Q04172 456 aa7.85□□□□□ -1.15
PRE2YPR103W RSA3Q05942 220 aaKnown RBP7.85□□□□□ -1.15
PRE2YPR103W FPR4Q06205 392 aaPredicted RBP7.85□□□□□ -1.15
PRE2YPR103W LAP2Q10740 671 aa7.85□□□□□ -1.15
PRE2YPR103W CDC53Q12018 815 aaKnown RBP7.85□□□□□ -1.15
PRE2YPR103W AI3P03877 415 aa7.84□□□□□ -1.15
PRE2YPR103W CIT2P08679 460 aa7.84□□□□□ -1.15
PRE2YPR103W RET1P22276 1149 aaKnown RBP7.84□□□□□ -1.15
PRE2YPR103W QNS1P38795 714 aaKnown RBP7.84□□□□□ -1.15
PRE2YPR103W MSH4P40965 878 aaPredicted RBP7.84□□□□□ -1.15
PRE2YPR103W YGL176CP46945 554 aa7.84□□□□□ -1.15
PRE2YPR103W RPN4Q03465 531 aa7.84□□□□□ -1.15
PRE2YPR103W RKM4Q12504 494 aa7.84□□□□□ -1.15
PRE2YPR103W YCK2P23292 546 aaKnown RBP7.83□□□□□ -1.16
PRE2YPR103W MCM7P38132 845 aa7.83□□□□□ -1.16
PRE2YPR103W RGD1P38339 666 aa7.83□□□□□ -1.16
PRE2YPR103W YHR020WP38708 688 aaKnown RBP7.83□□□□□ -1.16
PRE2YPR103W BUD6P41697 788 aa7.83□□□□□ -1.16
PRE2YPR103W TIM54P47045 478 aa7.83□□□□□ -1.16
PRE2YPR103W NSG2P53898 299 aa7.83□□□□□ -1.16
PRE2YPR103W YDR215CQ12240 137 aa7.83□□□□□ -1.16
PRE2YPR103W PBP2P38151 413 aaKnown RBP RIP-Chip data7.82□□□□□ -1.16not detected
PRE2YPR103W NMD3P38861 518 aaKnown RBP7.82□□□□□ -1.16
PRE2YPR103W MBP1P39678 833 aa7.82□□□□□ -1.16
PRE2YPR103W SLN1P39928 1220 aaPredicted RBP7.82□□□□□ -1.16
PRE2YPR103W VPS53P47061 822 aa7.82□□□□□ -1.16
PRE2YPR103W YLR257WQ06146 321 aaKnown RBP7.82□□□□□ -1.16
PRE2YPR103W FMP25Q08023 583 aa7.82□□□□□ -1.16
PRE2YPR103W KIP1P28742 1111 aa7.81□□□□□ -1.16
PRE2YPR103W MRP8P35719 219 aa7.81□□□□□ -1.16
PRE2YPR103W SIP5P40210 489 aaKnown RBP7.81□□□□□ -1.16
PRE2YPR103W PFD1P46988 109 aa7.81□□□□□ -1.16
PRE2YPR103W HNT2P49775 206 aa7.81□□□□□ -1.16
PRE2YPR103W PPM2Q08282 695 aa7.81□□□□□ -1.16
PRE2YPR103W RSC6P25632 483 aa7.8□□□□□ -1.16
PRE2YPR103W RPL8BP29453 256 aaKnown RBP7.8□□□□□ -1.16
PRE2YPR103W SMY2P32909 740 aaKnown RBP7.8□□□□□ -1.16
PRE2YPR103W YKL107WP34251 309 aa7.8□□□□□ -1.16
PRE2YPR103W NNK1P36003 928 aa7.8□□□□□ -1.16
PRE2YPR103W HSE1P38753 452 aa7.8□□□□□ -1.16
PRE2YPR103W IRR1P40541 1150 aa7.8□□□□□ -1.16
PRE2YPR103W EAR1Q03212 550 aa7.8□□□□□ -1.16
PRE2YPR103W YER152CP10356 443 aa7.79□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms