RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCR1	YPL006W	YOR296W	Q08748	1289 aa		4.38	□□□□□ -1.71
NCR1	YPL006W	FLO1	P32768	1537 aa		4.38	□□□□□ -1.71
NCR1	YPL006W	RAD57	P25301	460 aa		4.38	□□□□□ -1.71
NCR1	YPL006W	RNT1	Q02555	471 aa		4.38	□□□□□ -1.71
NCR1	YPL006W	SFH1	Q06168	426 aa		4.38	□□□□□ -1.71
NCR1	YPL006W	PSR2	Q07949	397 aa		4.38	□□□□□ -1.71
NCR1	YPL006W	SNF3	P10870	884 aa		4.38	□□□□□ -1.71
NCR1	YPL006W	PSO2	P30620	661 aa		4.38	□□□□□ -1.71
NCR1	YPL006W	PTK1	P36002	662 aa	Predicted RBP	4.38	□□□□□ -1.71
NCR1	YPL006W	SPT8	P38915	602 aa		4.38	□□□□□ -1.71
NCR1	YPL006W	TIF4632	P39936	914 aa	Known RBP	4.38	□□□□□ -1.71
NCR1	YPL006W	THI6	P41835	540 aa		4.38	□□□□□ -1.71
NCR1	YPL006W	FYV8	P46949	817 aa	Known RBP	4.38	□□□□□ -1.71
NCR1	YPL006W	IRC4	Q03036	179 aa		4.38	□□□□□ -1.71
NCR1	YPL006W	SYF1	Q04048	859 aa	Predicted RBP	4.38	□□□□□ -1.71
NCR1	YPL006W	SPP382	Q06411	708 aa	Predicted RBP	4.38	□□□□□ -1.71
NCR1	YPL006W	LAM6	Q08001	693 aa		4.38	□□□□□ -1.71
NCR1	YPL006W	TOS4	Q06266	489 aa		4.37	□□□□□ -1.71
NCR1	YPL006W	RRP6	Q12149	733 aa	Known RBP	4.37	□□□□□ -1.71
NCR1	YPL006W	NBL1	Q3E7Y6	73 aa		4.37	□□□□□ -1.71
NCR1	YPL006W	PPR1	P07272	904 aa	Predicted RBP	4.37	□□□□□ -1.71
NCR1	YPL006W	MTF2	P10849	440 aa		4.37	□□□□□ -1.71
NCR1	YPL006W	RIT1	P23796	513 aa		4.37	□□□□□ -1.71
NCR1	YPL006W	ECM32	P32644	1121 aa	Known RBP	4.37	□□□□□ -1.71
NCR1	YPL006W	GDT1	P38301	280 aa	Predicted RBP	4.37	□□□□□ -1.71
NCR1	YPL006W	NPR2	P39923	615 aa		4.37	□□□□□ -1.71
NCR1	YPL006W	MIC19	P43594	170 aa		4.37	□□□□□ -1.71
NCR1	YPL006W	YGR153W	P48238	217 aa		4.37	□□□□□ -1.71
NCR1	YPL006W	VTC3	Q02725	835 aa		4.37	□□□□□ -1.71
NCR1	YPL006W	UME1	Q03010	460 aa		4.37	□□□□□ -1.71
NCR1	YPL006W	GIS4	Q04233	774 aa		4.37	□□□□□ -1.71
NCR1	YPL006W	NOP6	Q07623	225 aa	Known RBP	4.37	□□□□□ -1.71
NCR1	YPL006W	CWC2	Q12046	339 aa	Predicted RBP	4.37	□□□□□ -1.71
NCR1	YPL006W	TIP41	Q12199	356 aa		4.37	□□□□□ -1.71
NCR1	YPL006W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.37	□□□□□ -1.71	not detected
NCR1	YPL006W	PAP1	P29468	568 aa	Known RBP	4.37	□□□□□ -1.71
NCR1	YPL006W	PTC4	P38089	393 aa		4.37	□□□□□ -1.71
NCR1	YPL006W	STT3	P39007	718 aa	Known RBP	4.37	□□□□□ -1.71
NCR1	YPL006W	ALG2	P43636	503 aa		4.37	□□□□□ -1.71
NCR1	YPL006W	YDR341C	Q05506	607 aa	Known RBP	4.37	□□□□□ -1.71
NCR1	YPL006W	YOR223W	Q12015	292 aa		4.37	□□□□□ -1.71
NCR1	YPL006W	SRP54	P20424	541 aa	Known RBP	4.36	□□□□□ -1.71
NCR1	YPL006W	HXT1	P32465	570 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	SAP1	P39955	897 aa	Known RBP	4.36	□□□□□ -1.71
NCR1	YPL006W	RPT4	P53549	437 aa	Known RBP	4.36	□□□□□ -1.71
NCR1	YPL006W	RTC4	P53850	401 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	NSG2	P53898	299 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	PRP42	Q03776	544 aa	Known RBP	4.36	□□□□□ -1.71
NCR1	YPL006W	YLR287C	Q05881	355 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	OSH2	Q12451	1283 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	RAD61	Q99359	647 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	HKR1	P41809	1802 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	PMD1	P32634	1753 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	FOB1	O13329	566 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	PDC6	P26263	563 aa	Known RBP	4.36	□□□□□ -1.71
NCR1	YPL006W	KRE2	P27809	442 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	BYE1	P36106	594 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	RPN11	P43588	306 aa	Known RBP	4.36	□□□□□ -1.71
NCR1	YPL006W	YFH7	P43591	353 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	RET3	P53600	189 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	MRD1	Q06106	887 aa	Known RBP	4.36	□□□□□ -1.71
NCR1	YPL006W	DIB1	Q06819	143 aa	Predicted RBP	4.36	□□□□□ -1.71
NCR1	YPL006W	YAP7	Q08182	245 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	NUR1	Q12066	484 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	MYO1	P08964	1928 aa		4.36	□□□□□ -1.71
NCR1	YPL006W	RPC25	P35718	212 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	VID27	P40157	782 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	VTC2	P43585	828 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	YNL035C	P53962	389 aa	Known RBP	4.35	□□□□□ -1.71
NCR1	YPL006W	UTP5	Q04177	643 aa	Known RBP	4.35	□□□□□ -1.71
NCR1	YPL006W	TRS120	Q04183	1289 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	POB3	Q04636	552 aa	Known RBP	4.35	□□□□□ -1.71
NCR1	YPL006W	YLR001C	Q07895	862 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	TOM70	P07213	617 aa	Known RBP	4.35	□□□□□ -1.71
NCR1	YPL006W	TUP1	P16649	713 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	CKI1	P20485	582 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	CNS1	P33313	385 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	VPS8	P39702	1274 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	YJR079W	P47126	109 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	RPT6	Q01939	405 aa	Known RBP	4.35	□□□□□ -1.71
NCR1	YPL006W	DAL7	P21826	554 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	UGA2	P38067	497 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	YAP5	P40574	245 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	UBA2	P52488	636 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	TAD1	P53065	400 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	SOV1	Q04748	898 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	OMS1	Q06668	471 aa		4.35	□□□□□ -1.71
NCR1	YPL006W	ISY1	P21374	235 aa	Predicted RBP	4.34	□□□□□ -1.71
NCR1	YPL006W	IES1	P43579	692 aa		4.34	□□□□□ -1.71
NCR1	YPL006W	CCM1	P48237	864 aa	Predicted RBP	4.34	□□□□□ -1.71
NCR1	YPL006W	BDF2	Q07442	638 aa		4.34	□□□□□ -1.71
NCR1	YPL006W	SIL1	Q08199	421 aa		4.34	□□□□□ -1.71
NCR1	YPL006W	DSE3	Q08729	430 aa		4.34	□□□□□ -1.71
NCR1	YPL006W	MIP1	P15801	1254 aa		4.34	□□□□□ -1.71
NCR1	YPL006W	THR4	P16120	514 aa	Known RBP	4.34	□□□□□ -1.71
NCR1	YPL006W	SRB4	P32569	687 aa		4.34	□□□□□ -1.71
NCR1	YPL006W	FRD1	P32614	470 aa	Known RBP	4.34	□□□□□ -1.71
NCR1	YPL006W	NUC1	P08466	329 aa		4.34	□□□□□ -1.72
NCR1	YPL006W	RAD53	P22216	821 aa		4.34	□□□□□ -1.72
NCR1	YPL006W	NFU1	P32860	256 aa		4.34	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 56.7 ms