RNA–Protein interactions for RNA: YKL146W

AVT3, Transcript of Vacuolar transporter, yeast

Gene AVT3, Length 2,079 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AVT3	YKL146W	GET3	Q12154	354 aa	Known RBP	5.83	□□□□□ -1.48
AVT3	YKL146W	CEX1	Q12453	761 aa		5.83	□□□□□ -1.48
AVT3	YKL146W	CSR2	Q12734	1121 aa		5.83	□□□□□ -1.48
AVT3	YKL146W	NBL1	Q3E7Y6	73 aa		5.83	□□□□□ -1.48
AVT3	YKL146W	TUS1	Q06412	1307 aa		5.82	□□□□□ -1.48
AVT3	YKL146W	HXK1	P04806	485 aa	Known RBP	5.82	□□□□□ -1.48
AVT3	YKL146W	RPN12	P32496	274 aa		5.82	□□□□□ -1.48
AVT3	YKL146W	DID4	P36108	232 aa		5.82	□□□□□ -1.48
AVT3	YKL146W	ACA1	P39970	489 aa		5.82	□□□□□ -1.48
AVT3	YKL146W	NAF1	P53919	492 aa	Known RBP	5.82	□□□□□ -1.48
AVT3	YKL146W	CWC15	Q03772	175 aa	Known RBP	5.82	□□□□□ -1.48
AVT3	YKL146W	GIS4	Q04233	774 aa		5.82	□□□□□ -1.48
AVT3	YKL146W	CSC1	Q06538	782 aa		5.82	□□□□□ -1.48
AVT3	YKL146W	DDP1	Q99321	188 aa	Known RBP	5.82	□□□□□ -1.48
AVT3	YKL146W	ERG12	P07277	443 aa		5.81	□□□□□ -1.48
AVT3	YKL146W	TPM2	P40414	161 aa		5.81	□□□□□ -1.48
AVT3	YKL146W	NUP42	P49686	430 aa	Known RBP	5.81	□□□□□ -1.48
AVT3	YKL146W	YGL138C	P53122	345 aa		5.81	□□□□□ -1.48
AVT3	YKL146W	DOS2	P54858	310 aa		5.81	□□□□□ -1.48
AVT3	YKL146W	KRS1	P15180	591 aa	Known RBP	5.81	□□□□□ -1.48
AVT3	YKL146W	MAK11	P20484	414 aa	Known RBP	5.81	□□□□□ -1.48
AVT3	YKL146W	SEC20	P28791	383 aa		5.81	□□□□□ -1.48
AVT3	YKL146W	CCT3	P39077	534 aa	Known RBP	5.81	□□□□□ -1.48
AVT3	YKL146W	TIF4631	P39935	952 aa	Known RBP	5.81	□□□□□ -1.48
AVT3	YKL146W	VHR2	P40041	505 aa		5.81	□□□□□ -1.48
AVT3	YKL146W	LSB1	P53281	241 aa		5.81	□□□□□ -1.48
AVT3	YKL146W	EIS1	Q05050	843 aa	Known RBP	5.81	□□□□□ -1.48
AVT3	YKL146W	SMD2	Q06217	110 aa	Known RBP	5.81	□□□□□ -1.48
AVT3	YKL146W	RPL8A	P17076	256 aa	Known RBP	5.8	□□□□□ -1.48
AVT3	YKL146W	SWE1	P32944	819 aa		5.8	□□□□□ -1.48
AVT3	YKL146W	SPC42	P36094	363 aa		5.8	□□□□□ -1.48
AVT3	YKL146W	RFT1	P38206	574 aa	Predicted RBP	5.8	□□□□□ -1.48
AVT3	YKL146W	VIP1	Q06685	1146 aa	Known RBP	5.8	□□□□□ -1.48
AVT3	YKL146W	TIP41	Q12199	356 aa		5.8	□□□□□ -1.48
AVT3	YKL146W	GIN4	Q12263	1142 aa		5.8	□□□□□ -1.48
AVT3	YKL146W	PWP2	P25635	923 aa	Known RBP	5.79	□□□□□ -1.48
AVT3	YKL146W	KNS1	P32350	737 aa	Predicted RBP	5.79	□□□□□ -1.48
AVT3	YKL146W	SAS3	P34218	831 aa		5.79	□□□□□ -1.48
AVT3	YKL146W	ASE1	P50275	885 aa		5.79	□□□□□ -1.48
AVT3	YKL146W	RSC1	P53236	928 aa		5.79	□□□□□ -1.48
AVT3	YKL146W	SOL4	P53315	255 aa		5.79	□□□□□ -1.48
AVT3	YKL146W	KRE33	P53914	1056 aa	Known RBP	5.79	□□□□□ -1.48
AVT3	YKL146W	TFB3	Q03290	321 aa		5.79	□□□□□ -1.48
AVT3	YKL146W	YOR296W	Q08748	1289 aa		5.79	□□□□□ -1.48
AVT3	YKL146W	HAA1	Q12753	694 aa	Known RBP	5.79	□□□□□ -1.48
AVT3	YKL146W	TRS33	Q99394	268 aa		5.79	□□□□□ -1.48
AVT3	YKL146W	PNT1	P38969	423 aa		5.79	□□□□□ -1.48
AVT3	YKL146W	YER130C	P39959	443 aa		5.79	□□□□□ -1.48
AVT3	YKL146W	PEX21	P50091	288 aa		5.79	□□□□□ -1.48
AVT3	YKL146W	RTC4	P53850	401 aa		5.79	□□□□□ -1.48
AVT3	YKL146W	BNI5	P53890	448 aa	Known RBP	5.79	□□□□□ -1.48
AVT3	YKL146W	VMS1	Q04311	632 aa	Known RBP	5.79	□□□□□ -1.48
AVT3	YKL146W	CSM3	Q04659	317 aa		5.79	□□□□□ -1.48
AVT3	YKL146W	SUE1	Q06524	206 aa		5.79	□□□□□ -1.48
AVT3	YKL146W	UTP4	Q06679	776 aa	Known RBP	5.79	□□□□□ -1.48
AVT3	YKL146W	GPA1	P08539	472 aa		5.78	□□□□□ -1.48
AVT3	YKL146W	THR4	P16120	514 aa	Known RBP	5.78	□□□□□ -1.48
AVT3	YKL146W	URA1	P28272	314 aa	Predicted RBP	5.78	□□□□□ -1.48
AVT3	YKL146W	RRN6	P32786	894 aa		5.78	□□□□□ -1.48
AVT3	YKL146W	YKT6	P36015	200 aa	Known RBP	5.78	□□□□□ -1.48
AVT3	YKL146W	NPR3	P38742	1146 aa		5.78	□□□□□ -1.48
AVT3	YKL146W	YPT11	P48559	417 aa		5.78	□□□□□ -1.48
AVT3	YKL146W	PEX29	Q03370	554 aa		5.78	□□□□□ -1.48
AVT3	YKL146W	TRS120	Q04183	1289 aa		5.78	□□□□□ -1.48
AVT3	YKL146W	SGD1	Q06132	899 aa		5.78	□□□□□ -1.48
AVT3	YKL146W	PTC5	Q12511	572 aa		5.78	□□□□□ -1.48
AVT3	YKL146W	MCM4	P30665	933 aa	Known RBP	5.78	□□□□□ -1.48
AVT3	YKL146W	BCH2	P36122	765 aa		5.78	□□□□□ -1.48
AVT3	YKL146W	RKM3	P38222	552 aa		5.78	□□□□□ -1.48
AVT3	YKL146W	LYS14	P40971	790 aa		5.78	□□□□□ -1.48
AVT3	YKL146W	RRT6	P53117	311 aa	Predicted RBP	5.78	□□□□□ -1.48
AVT3	YKL146W	RET3	P53600	189 aa		5.78	□□□□□ -1.48
AVT3	YKL146W	DSE4	P53753	1117 aa		5.78	□□□□□ -1.48
AVT3	YKL146W	LCD1	Q04377	747 aa		5.78	□□□□□ -1.48
AVT3	YKL146W	ALG1	P16661	449 aa		5.77	□□□□□ -1.49
AVT3	YKL146W	MCM3	P24279	971 aa	Known RBP	5.77	□□□□□ -1.49
AVT3	YKL146W	MRM1	P25270	412 aa		5.77	□□□□□ -1.49
AVT3	YKL146W	OCT1	P35999	772 aa		5.77	□□□□□ -1.49
AVT3	YKL146W	OCA5	P38738	679 aa		5.77	□□□□□ -1.49
AVT3	YKL146W	STT3	P39007	718 aa	Known RBP	5.77	□□□□□ -1.49
AVT3	YKL146W	CUE3	P53137	624 aa	Known RBP	5.77	□□□□□ -1.49
AVT3	YKL146W	MMR1	Q06324	491 aa		5.77	□□□□□ -1.49
AVT3	YKL146W	SLK19	Q08581	821 aa	Known RBP	5.77	□□□□□ -1.49
AVT3	YKL146W	FBP1	P09201	348 aa		5.76	□□□□□ -1.49
AVT3	YKL146W	BMH1	P29311	267 aa	Known RBP	5.76	□□□□□ -1.49
AVT3	YKL146W	SLD2	P34252	453 aa		5.76	□□□□□ -1.49
AVT3	YKL146W	RRM3	P38766	723 aa		5.76	□□□□□ -1.49
AVT3	YKL146W	YIL089W	P40500	205 aa		5.76	□□□□□ -1.49
AVT3	YKL146W	FMS1	P50264	508 aa		5.76	□□□□□ -1.49
AVT3	YKL146W	SDA1	P53313	767 aa	Known RBP	5.76	□□□□□ -1.49
AVT3	YKL146W	YML037C	Q03703	340 aa		5.76	□□□□□ -1.49
AVT3	YKL146W	TUF1	P02992	437 aa	Known RBP	5.76	□□□□□ -1.49
AVT3	YKL146W	RAD18	P10862	487 aa		5.76	□□□□□ -1.49
AVT3	YKL146W	TAF13	P11747	167 aa		5.76	□□□□□ -1.49
AVT3	YKL146W	SSA4	P22202	642 aa	Known RBP	5.76	□□□□□ -1.49
AVT3	YKL146W	PER1	P25625	357 aa		5.76	□□□□□ -1.49
AVT3	YKL146W	VAB2	P40003	282 aa		5.76	□□□□□ -1.49
AVT3	YKL146W	CIT3	P43635	486 aa		5.76	□□□□□ -1.49
AVT3	YKL146W	OXR1	Q08952	273 aa		5.76	□□□□□ -1.49
AVT3	YKL146W	HIS4	P00815	799 aa	Known RBP	5.75	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 160.3 ms