RNA–Protein interactions for RNA: YHR031C

RRM3, Transcript of DNA helicase involved in rDNA replication and Ty1 transposition, yeastyeast

Gene RRM3, Length 2,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRM3YHR031C YHR219WP38900 624 aa3.36□□□□□ -1.87
RRM3YHR031C VPS41P38959 992 aa3.36□□□□□ -1.87
RRM3YHR031C BUD6P41697 788 aa3.36□□□□□ -1.87
RRM3YHR031C STU2P46675 888 aa3.36□□□□□ -1.87
RRM3YHR031C BFA1P47113 574 aa3.36□□□□□ -1.87
RRM3YHR031C RPA14P50106 137 aa3.36□□□□□ -1.87
RRM3YHR031C ELA1P53861 379 aaPredicted RBP3.36□□□□□ -1.87
RRM3YHR031C CTF4Q01454 927 aa3.36□□□□□ -1.87
RRM3YHR031C OYE2Q03558 400 aaKnown RBP3.36□□□□□ -1.87
RRM3YHR031C ALR1Q08269 859 aa3.36□□□□□ -1.87
RRM3YHR031C THO2P53552 1597 aaKnown RBP3.36□□□□□ -1.87
RRM3YHR031C IRC20Q06554 1556 aa3.36□□□□□ -1.87
RRM3YHR031C PET494P07390 489 aaPredicted RBP3.36□□□□□ -1.87
RRM3YHR031C RPA135P22138 1203 aaKnown RBP3.36□□□□□ -1.87
RRM3YHR031C CDC10P25342 322 aaKnown RBP3.36□□□□□ -1.87
RRM3YHR031C MSH1P25846 959 aa3.36□□□□□ -1.87
RRM3YHR031C NOC2P39744 710 aaKnown RBP3.36□□□□□ -1.87
RRM3YHR031C MET18P40469 1032 aa3.36□□□□□ -1.87
RRM3YHR031C IES1P43579 692 aa3.36□□□□□ -1.87
RRM3YHR031C REX2P54964 269 aaKnown RBP3.36□□□□□ -1.87
RRM3YHR031C YMR111CQ04461 462 aaPredicted RBP3.36□□□□□ -1.87
RRM3YHR031C CLP1Q08685 445 aaPredicted RBP3.36□□□□□ -1.87
RRM3YHR031C RKM4Q12504 494 aa3.36□□□□□ -1.87
RRM3YHR031C SSK22P25390 1331 aaPredicted RBP3.36□□□□□ -1.87
RRM3YHR031C CMP2P14747 604 aa3.35□□□□□ -1.87
RRM3YHR031C SEC15P22224 910 aa3.35□□□□□ -1.87
RRM3YHR031C CDC48P25694 835 aaKnown RBP3.35□□□□□ -1.87
RRM3YHR031C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
RRM3YHR031C UBP13P38187 747 aa3.35□□□□□ -1.87
RRM3YHR031C SSZ1P38788 538 aaKnown RBP3.35□□□□□ -1.87
RRM3YHR031C FAF1P40546 346 aaPredicted RBP3.35□□□□□ -1.87
RRM3YHR031C YFL066CP43538 392 aa3.35□□□□□ -1.87
RRM3YHR031C EMP47P43555 445 aa3.35□□□□□ -1.87
RRM3YHR031C YJR107WP47145 328 aa3.35□□□□□ -1.87
RRM3YHR031C ARP5P53946 755 aa3.35□□□□□ -1.87
RRM3YHR031C RSM28Q03430 361 aa3.35□□□□□ -1.87
RRM3YHR031C SSQ1Q05931 657 aaPredicted RBP3.35□□□□□ -1.87
RRM3YHR031C YPR097WQ06839 1073 aa3.35□□□□□ -1.87
RRM3YHR031C YOL057WQ08225 711 aa3.35□□□□□ -1.87
RRM3YHR031C SLK19Q08581 821 aaKnown RBP3.35□□□□□ -1.87
RRM3YHR031C TAF2P23255 1407 aa3.35□□□□□ -1.87
RRM3YHR031C TSC11P40061 1430 aa3.35□□□□□ -1.87
RRM3YHR031C PDR10P51533 1564 aa3.35□□□□□ -1.87
RRM3YHR031C CDC37P06101 506 aaKnown RBP3.35□□□□□ -1.87
RRM3YHR031C SSB1P11484 613 aaKnown RBP3.35□□□□□ -1.87
RRM3YHR031C PUF4P25339 888 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
RRM3YHR031C PPH3P32345 308 aa3.35□□□□□ -1.87
RRM3YHR031C GDT1P38301 280 aaPredicted RBP3.35□□□□□ -1.87
RRM3YHR031C HXT5P38695 592 aa3.35□□□□□ -1.87
RRM3YHR031C ERP2P39704 215 aa3.35□□□□□ -1.87
RRM3YHR031C SPC72P39723 622 aa3.35□□□□□ -1.87
RRM3YHR031C MAM1P40065 302 aa3.35□□□□□ -1.87
RRM3YHR031C SSB2P40150 613 aaKnown RBP3.35□□□□□ -1.87
RRM3YHR031C YTA6P40328 754 aa3.35□□□□□ -1.87
RRM3YHR031C KTR7P40504 517 aa3.35□□□□□ -1.87
RRM3YHR031C BUD27P43573 796 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87not detected
RRM3YHR031C ENP2P48234 707 aaKnown RBP3.35□□□□□ -1.87
RRM3YHR031C OCA1P50946 238 aaPredicted RBP3.35□□□□□ -1.87
RRM3YHR031C LSC1P53598 329 aaKnown RBP3.35□□□□□ -1.87
RRM3YHR031C YNL058CP53947 316 aa3.35□□□□□ -1.87
RRM3YHR031C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.35□□□□□ -1.87 RIP-Chip
RRM3YHR031C ECM23Q02710 187 aa3.35□□□□□ -1.87
RRM3YHR031C MSH6Q03834 1242 aa3.35□□□□□ -1.87
RRM3YHR031C PMT7Q06644 662 aa3.35□□□□□ -1.87
RRM3YHR031C TY1B-DR4Q07793 1604 aa3.34□□□□□ -1.87
RRM3YHR031C MCM2P29469 868 aa3.34□□□□□ -1.87
RRM3YHR031C RME1P32338 300 aaKnown RBP3.34□□□□□ -1.87
RRM3YHR031C MET4P32389 672 aa3.34□□□□□ -1.87
RRM3YHR031C PPG1P32838 368 aa3.34□□□□□ -1.87
RRM3YHR031C DLD1P32891 587 aa3.34□□□□□ -1.87
RRM3YHR031C TBS1P38114 1094 aa3.34□□□□□ -1.87
RRM3YHR031C RFC1P38630 861 aaKnown RBP3.34□□□□□ -1.87
RRM3YHR031C PPX1P38698 397 aa3.34□□□□□ -1.87
RRM3YHR031C ETP1P38748 585 aaKnown RBP3.34□□□□□ -1.87
RRM3YHR031C VAC8P39968 578 aa3.34□□□□□ -1.87
RRM3YHR031C PNG1Q02890 363 aa3.34□□□□□ -1.87
RRM3YHR031C SVL3Q03088 825 aaKnown RBP3.34□□□□□ -1.87
RRM3YHR031C VPS20Q04272 221 aa3.34□□□□□ -1.87
RRM3YHR031C KRE28Q04431 385 aa3.34□□□□□ -1.87
RRM3YHR031C FUS2Q05670 677 aa3.34□□□□□ -1.87
RRM3YHR031C YPR084WQ06821 456 aa3.34□□□□□ -1.87
RRM3YHR031C DNL4Q08387 944 aaPredicted RBP3.34□□□□□ -1.87
RRM3YHR031C THI72Q08579 599 aa3.34□□□□□ -1.87
RRM3YHR031C CIR2Q08822 631 aa3.34□□□□□ -1.87
RRM3YHR031C ERP4Q12450 207 aa3.34□□□□□ -1.87
RRM3YHR031C SWI1P09547 1314 aa3.34□□□□□ -1.87
RRM3YHR031C AI1P03875 834 aa3.34□□□□□ -1.88
RRM3YHR031C ARD1P07347 238 aaPredicted RBP3.34□□□□□ -1.88
RRM3YHR031C PWP2P25635 923 aaKnown RBP3.34□□□□□ -1.88
RRM3YHR031C NIP100P33420 868 aa3.34□□□□□ -1.88
RRM3YHR031C YBL086CP38177 466 aa3.34□□□□□ -1.88
RRM3YHR031C HSM3P38348 480 aa3.34□□□□□ -1.88
RRM3YHR031C YHR218WP38899 603 aa3.34□□□□□ -1.88
RRM3YHR031C SWD1P39706 426 aa3.34□□□□□ -1.88
RRM3YHR031C UTP18P40362 594 aaPredicted RBP3.34□□□□□ -1.88
RRM3YHR031C FIG4P42837 879 aa3.34□□□□□ -1.88
RRM3YHR031C FMP30Q02883 468 aa3.34□□□□□ -1.88
RRM3YHR031C CWC15Q03772 175 aaKnown RBP3.34□□□□□ -1.88
RRM3YHR031C TSR1Q07381 788 aaKnown RBP3.34□□□□□ -1.88
RRM3YHR031C FRA1Q07825 749 aa3.34□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms