RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C PIP2P52960 996 aa6.56□□□□□ -1.36
SEC20YDR498C MET6P05694 767 aaKnown RBP6.55□□□□□ -1.36
SEC20YDR498C GAP1P19145 602 aaPredicted RBP6.55□□□□□ -1.36
SEC20YDR498C YKU70P32807 602 aa6.55□□□□□ -1.36
SEC20YDR498C RXT2P38255 430 aa6.55□□□□□ -1.36
SEC20YDR498C RSM25P40496 264 aa6.55□□□□□ -1.36
SEC20YDR498C MSH4P40965 878 aaPredicted RBP6.55□□□□□ -1.36
SEC20YDR498C MTC3P53077 123 aa6.55□□□□□ -1.36
SEC20YDR498C PUS6P53294 404 aa6.55□□□□□ -1.36
SEC20YDR498C YPL260WQ08977 551 aa6.55□□□□□ -1.36
SEC20YDR498C PSF3Q12146 194 aa6.55□□□□□ -1.36
SEC20YDR498C GET3Q12154 354 aaKnown RBP6.55□□□□□ -1.36
SEC20YDR498C PGI1P12709 554 aaKnown RBP6.54□□□□□ -1.36
SEC20YDR498C RNR3P21672 869 aaKnown RBP6.54□□□□□ -1.36
SEC20YDR498C CHS3P29465 1165 aa6.54□□□□□ -1.36
SEC20YDR498C AFG2P32794 780 aa6.54□□□□□ -1.36
SEC20YDR498C PSY4P38193 441 aa6.54□□□□□ -1.36
SEC20YDR498C VMS1Q04311 632 aaKnown RBP6.54□□□□□ -1.36
SEC20YDR498C MRD1Q06106 887 aaKnown RBP6.54□□□□□ -1.36
SEC20YDR498C SGD1Q06132 899 aa6.54□□□□□ -1.36
SEC20YDR498C KEL3Q08979 651 aaPredicted RBP6.54□□□□□ -1.36
SEC20YDR498C ISU2Q12056 156 aa6.54□□□□□ -1.36
SEC20YDR498C ACE2P21192 770 aa6.53□□□□□ -1.36
SEC20YDR498C MPE1P35728 441 aaKnown RBP6.53□□□□□ -1.36
SEC20YDR498C MRPL10P36520 322 aa6.53□□□□□ -1.36
SEC20YDR498C YER156CP40093 338 aaKnown RBP6.53□□□□□ -1.36
SEC20YDR498C LYS14P40971 790 aa6.53□□□□□ -1.36
SEC20YDR498C PEX21P50091 288 aa6.53□□□□□ -1.36
SEC20YDR498C YGL138CP53122 345 aa6.53□□□□□ -1.36
SEC20YDR498C RRG1Q12167 365 aaPredicted RBP6.53□□□□□ -1.36
SEC20YDR498C STI1P15705 589 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
SEC20YDR498C GSY2P27472 705 aa6.52□□□□□ -1.37
SEC20YDR498C SPT23P35210 1082 aa6.52□□□□□ -1.37
SEC20YDR498C ORC6P38826 435 aa6.52□□□□□ -1.37
SEC20YDR498C RPT6Q01939 405 aaKnown RBP6.52□□□□□ -1.37
SEC20YDR498C SKG3Q06315 1026 aa6.52□□□□□ -1.37
SEC20YDR498C TOP1P04786 769 aa6.51□□□□□ -1.37
SEC20YDR498C HXK1P04806 485 aaKnown RBP6.51□□□□□ -1.37
SEC20YDR498C RGP1P16664 663 aa6.51□□□□□ -1.37
SEC20YDR498C MAL31P38156 614 aa6.51□□□□□ -1.37
SEC20YDR498C CUE3P53137 624 aaKnown RBP6.51□□□□□ -1.37
SEC20YDR498C CTR9P89105 1077 aa6.51□□□□□ -1.37
SEC20YDR498C GIS4Q04233 774 aa6.51□□□□□ -1.37
SEC20YDR498C SUE1Q06524 206 aa6.51□□□□□ -1.37
SEC20YDR498C TUS1Q06412 1307 aa6.5□□□□□ -1.37
SEC20YDR498C PRE8P23639 250 aa6.5□□□□□ -1.37
SEC20YDR498C MCM3P24279 971 aaKnown RBP6.5□□□□□ -1.37
SEC20YDR498C SHC1P39000 512 aa6.5□□□□□ -1.37
SEC20YDR498C VPS4P52917 437 aa6.5□□□□□ -1.37
SEC20YDR498C BNI4P53858 892 aa6.5□□□□□ -1.37
SEC20YDR498C GDE1Q02979 1223 aa6.5□□□□□ -1.37
SEC20YDR498C WAR1Q03631 944 aa6.5□□□□□ -1.37
SEC20YDR498C CSC1Q06538 782 aa6.5□□□□□ -1.37
SEC20YDR498C ACK1Q07622 623 aaPredicted RBP6.5□□□□□ -1.37
SEC20YDR498C DSE3Q08729 430 aa6.5□□□□□ -1.37
SEC20YDR498C ECM29P38737 1868 aa6.49□□□□□ -1.37
SEC20YDR498C TUB2P02557 457 aaKnown RBP6.49□□□□□ -1.37
SEC20YDR498C SAM2P19358 384 aaKnown RBP6.49□□□□□ -1.37
SEC20YDR498C SRM1P21827 482 aa6.49□□□□□ -1.37
SEC20YDR498C PXL1P36166 706 aa6.49□□□□□ -1.37
SEC20YDR498C NDT80P38830 627 aa6.49□□□□□ -1.37
SEC20YDR498C KEL1P38853 1164 aaKnown RBP6.49□□□□□ -1.37
SEC20YDR498C YGR153WP48238 217 aa6.49□□□□□ -1.37
SEC20YDR498C ASE1P50275 885 aa6.49□□□□□ -1.37
SEC20YDR498C YDR341CQ05506 607 aaKnown RBP6.49□□□□□ -1.37
SEC20YDR498C ATG20Q07528 640 aa6.49□□□□□ -1.37
SEC20YDR498C TMA16Q08687 178 aa6.49□□□□□ -1.37
SEC20YDR498C PCL8Q08966 492 aa6.49□□□□□ -1.37
SEC20YDR498C SES1P07284 462 aaKnown RBP6.48□□□□□ -1.37
SEC20YDR498C NUC1P08466 329 aa6.48□□□□□ -1.37
SEC20YDR498C KIN1P13185 1064 aa6.48□□□□□ -1.37
SEC20YDR498C ALG1P16661 449 aa6.48□□□□□ -1.37
SEC20YDR498C YKT6P36015 200 aaKnown RBP6.48□□□□□ -1.37
SEC20YDR498C MIC60P36112 540 aa6.48□□□□□ -1.37
SEC20YDR498C ERG7P38604 731 aa6.48□□□□□ -1.37
SEC20YDR498C VPS8P39702 1274 aa6.48□□□□□ -1.37
SEC20YDR498C PTC2P39966 464 aaKnown RBP6.48□□□□□ -1.37
SEC20YDR498C STR2P47164 639 aa6.48□□□□□ -1.37
SEC20YDR498C NUP42P49686 430 aaKnown RBP6.48□□□□□ -1.37
SEC20YDR498C FOL1P53848 824 aa6.48□□□□□ -1.37
SEC20YDR498C MDM1Q01846 1127 aa6.48□□□□□ -1.37
SEC20YDR498C TIM50Q02776 476 aa6.48□□□□□ -1.37
SEC20YDR498C MMR1Q06324 491 aa6.48□□□□□ -1.37
SEC20YDR498C CIT1P00890 479 aa6.47□□□□□ -1.37
SEC20YDR498C BMH1P29311 267 aaKnown RBP6.47□□□□□ -1.37
SEC20YDR498C RPL8BP29453 256 aaKnown RBP6.47□□□□□ -1.37
SEC20YDR498C SHM1P37292 490 aaPredicted RBP6.47□□□□□ -1.37
SEC20YDR498C RRM3P38766 723 aa6.47□□□□□ -1.37
SEC20YDR498C MVP1P40959 511 aaKnown RBP6.47□□□□□ -1.37
SEC20YDR498C CIT3P43635 486 aa6.47□□□□□ -1.37
SEC20YDR498C LSC2P53312 427 aa6.47□□□□□ -1.37
SEC20YDR498C NAF1P53919 492 aaKnown RBP6.47□□□□□ -1.37
SEC20YDR498C TRM44Q02648 567 aaKnown RBP6.47□□□□□ -1.37
SEC20YDR498C VPS30Q02948 557 aa6.47□□□□□ -1.37
SEC20YDR498C EIS1Q05050 843 aaKnown RBP6.47□□□□□ -1.37
SEC20YDR498C YDL124WQ07551 312 aaKnown RBP6.47□□□□□ -1.37
SEC20YDR498C ETT1Q08421 412 aaKnown RBP6.47□□□□□ -1.37
SEC20YDR498C TFB4Q12004 338 aa6.47□□□□□ -1.37
SEC20YDR498C YRR1Q12172 810 aa6.47□□□□□ -1.37
SEC20YDR498C TAF13P11747 167 aa6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms