RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 RVS167P39743 482 aaKnown RBP8.63□□□□□ -1.03
snR78snR78 YAF9P53930 226 aa8.63□□□□□ -1.03
snR78snR78 LIP5P32875 414 aa8.62□□□□□ -1.03
snR78snR78 CIC1P38779 376 aaKnown RBP8.62□□□□□ -1.03
snR78snR78 DOT1Q04089 582 aaKnown RBP8.62□□□□□ -1.03
snR78snR78 GPT2P36148 743 aa8.61□□□□□ -1.03
snR78snR78 MEC3Q02574 474 aa8.61□□□□□ -1.03
snR78snR78 REI1P38344 393 aaPredicted RBP8.59□□□□□ -1.03
snR78snR78 STM1P39015 273 aaKnown RBP8.59□□□□□ -1.03
snR78snR78 YCS4Q06156 1176 aa8.59□□□□□ -1.03
snR78snR78 PUB1P32588 453 aaKnown RBP RIP-Chip data8.58□□□□□ -1.04not detected
snR78snR78 BRE4Q07660 1125 aa8.58□□□□□ -1.04
snR78snR78 ALG6Q12001 544 aaKnown RBP8.58□□□□□ -1.04
snR78snR78 MMM1P41800 426 aa8.57□□□□□ -1.04
snR78snR78 YKL077WP36081 392 aa8.56□□□□□ -1.04
snR78snR78 SHU2P38957 223 aa8.55□□□□□ -1.04
snR78snR78 CTH1P47976 325 aa8.55□□□□□ -1.04
snR78snR78 MSC6Q08818 692 aaKnown RBP8.55□□□□□ -1.04
snR78snR78 GCD6P32501 712 aaKnown RBP8.54□□□□□ -1.04
snR78snR78 VPS35P34110 944 aa8.54□□□□□ -1.04
snR78snR78 WHI3P34761 661 aaKnown RBP8.54□□□□□ -1.04
snR78snR78 PPX1P38698 397 aa8.54□□□□□ -1.04
snR78snR78 THI12P42883 340 aa8.54□□□□□ -1.04
snR78snR78 THI5P43534 340 aa8.54□□□□□ -1.04
snR78snR78 THI11P47183 340 aa8.54□□□□□ -1.04
snR78snR78 THI13Q07748 340 aa8.54□□□□□ -1.04
snR78snR78 ARL1P38116 183 aaKnown RBP8.53□□□□□ -1.04
snR78snR78 CIT3P43635 486 aa8.53□□□□□ -1.04
snR78snR78 MAG2Q06436 670 aaKnown RBP8.53□□□□□ -1.04
snR78snR78 NSI1Q12457 570 aa8.53□□□□□ -1.04
snR78snR78 PHO4P07270 312 aaKnown RBP8.52□□□□□ -1.05
snR78snR78 TY1A-LR4P0C2I8 440 aaKnown RBP8.52□□□□□ -1.05
snR78snR78 TY1A-DR6P0CX70 440 aa8.52□□□□□ -1.05
snR78snR78 TY1A-ER1P0CX71 440 aa8.52□□□□□ -1.05
snR78snR78 TY1A-LR2P0CX72 440 aa8.52□□□□□ -1.05
snR78snR78 TY1A-PLP0CX73 440 aa8.52□□□□□ -1.05
snR78snR78 TY1A-JR1P0CX74 440 aa8.52□□□□□ -1.05
snR78snR78 TY1A-LR3P0CX75 440 aa8.52□□□□□ -1.05
snR78snR78 TY1A-ML2P0CX76 440 aa8.52□□□□□ -1.05
snR78snR78 AVO1Q08236 1176 aa8.52□□□□□ -1.05
snR78snR78 TY1A-GR1Q12085 440 aa8.52□□□□□ -1.05
snR78snR78 TY1A-PR3Q6Q5H1 440 aaKnown RBP8.52□□□□□ -1.05
snR78snR78 TY1A-OLQ92392 440 aaKnown RBP8.52□□□□□ -1.05
snR78snR78 RPS4AP0CX35 261 aaKnown RBP8.51□□□□□ -1.05
snR78snR78 RPS4BP0CX36 261 aaKnown RBP8.51□□□□□ -1.05
snR78snR78 MSH4P40965 878 aaPredicted RBP8.51□□□□□ -1.05
snR78snR78 MET4P32389 672 aa8.5□□□□□ -1.05
snR78snR78 EXO5P38289 585 aa8.5□□□□□ -1.05
snR78snR78 YGR045CP53229 120 aa8.5□□□□□ -1.05
snR78snR78 ELA1P53861 379 aaPredicted RBP8.5□□□□□ -1.05
snR78snR78 RCM1P53972 490 aa8.5□□□□□ -1.05
snR78snR78 YOR059CQ08448 450 aaKnown RBP8.5□□□□□ -1.05
snR78snR78 PRP40P33203 583 aaKnown RBP8.49□□□□□ -1.05
snR78snR78 SLS1P42900 643 aa8.49□□□□□ -1.05
snR78snR78 SDH1Q00711 640 aa8.49□□□□□ -1.05
snR78snR78 DAL4Q04895 635 aa8.49□□□□□ -1.05
snR78snR78 GCD1P09032 578 aaPredicted RBP8.48□□□□□ -1.05
snR78snR78 KAR2P16474 682 aaKnown RBP8.48□□□□□ -1.05
snR78snR78 SEC20P28791 383 aa8.48□□□□□ -1.05
snR78snR78 DAK2P43550 591 aa8.48□□□□□ -1.05
snR78snR78 OXR1Q08952 273 aa8.48□□□□□ -1.05
snR78snR78 WHI5Q12416 295 aa8.48□□□□□ -1.05
snR78snR78 PEX13P80667 386 aa8.47□□□□□ -1.05
snR78snR78 NOG1Q02892 647 aaKnown RBP8.47□□□□□ -1.05
snR78snR78 NFS1P25374 497 aa8.46□□□□□ -1.06
snR78snR78 AVT1P47082 602 aa8.46□□□□□ -1.06
snR78snR78 RSM26P47141 266 aa8.46□□□□□ -1.06
snR78snR78 ALT1P52893 592 aa8.46□□□□□ -1.06
snR78snR78 MSH3P25336 1018 aa8.45□□□□□ -1.06
snR78snR78 UGA4P32837 571 aa8.45□□□□□ -1.06
snR78snR78 SMY2P32909 740 aaKnown RBP8.45□□□□□ -1.06
snR78snR78 MTR4P47047 1073 aaKnown RBP8.45□□□□□ -1.06
snR78snR78 ULP1Q02724 621 aa8.45□□□□□ -1.06
snR78snR78 NNK1P36003 928 aa8.44□□□□□ -1.06
snR78snR78 NEM1P38757 446 aa8.44□□□□□ -1.06
snR78snR78 SQT1P35184 431 aa8.43□□□□□ -1.06
snR78snR78 IPL1P38991 367 aa8.43□□□□□ -1.06
snR78snR78 EAR1Q03212 550 aa8.43□□□□□ -1.06
snR78snR78 SLD2P34252 453 aa8.42□□□□□ -1.06
snR78snR78 SEA4P38164 1038 aa8.42□□□□□ -1.06
snR78snR78 OYE3P41816 400 aaPredicted RBP8.42□□□□□ -1.06
snR78snR78 ATG14P38270 344 aa8.41□□□□□ -1.06
snR78snR78 YAR028WP39548 234 aa8.41□□□□□ -1.06
snR78snR78 IRC24P40580 263 aa8.4□□□□□ -1.06
snR78snR78 UTP5Q04177 643 aaKnown RBP8.4□□□□□ -1.06
snR78snR78 TOS4Q06266 489 aa8.4□□□□□ -1.06
snR78snR78 RPT1P33299 467 aaKnown RBP8.39□□□□□ -1.07
snR78snR78 PEX28P38848 579 aa8.39□□□□□ -1.07
snR78snR78 SEN54Q02825 467 aaPredicted RBP8.39□□□□□ -1.07
snR78snR78 YVC1Q12324 675 aa8.39□□□□□ -1.07
snR78snR78 VMA4P22203 233 aaKnown RBP8.38□□□□□ -1.07
snR78snR78 TRE1Q08919 783 aa8.38□□□□□ -1.07
snR78snR78 LAP2Q10740 671 aa8.38□□□□□ -1.07
snR78snR78 HSE1P38753 452 aa8.37□□□□□ -1.07
snR78snR78 XKS1P42826 600 aa8.37□□□□□ -1.07
snR78snR78 ADI1Q03677 179 aa8.37□□□□□ -1.07
snR78snR78 RET1P22276 1149 aaKnown RBP8.36□□□□□ -1.07
snR78snR78 ADP1P25371 1049 aa8.36□□□□□ -1.07
snR78snR78 POL12P38121 705 aaPredicted RBP8.36□□□□□ -1.07
snR78snR78 YNR063WP53749 607 aa8.36□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms