RNA–Protein interactions for RNA: snR78

snR78, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR78, Length 87 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR78snR78 MTC1P47018 478 aaKnown RBP21.29■■□□□ 1
snR78snR78 DRS1P32892 752 aaKnown RBP20.36■□□□□ 0.85
snR78snR78 FAP1P53971 965 aa18.75■□□□□ 0.59
snR78snR78 PRI1P10363 409 aa17.7■□□□□ 0.42
snR78snR78 DIP2Q12220 943 aaPredicted RBP17.69■□□□□ 0.42
snR78snR78 ISW2Q08773 1120 aa17.6■□□□□ 0.41
snR78snR78 PRY3P47033 881 aa17.58■□□□□ 0.4
snR78snR78 AAD16Q02895 342 aa17.58■□□□□ 0.4
snR78snR78 RPG1P38249 964 aaKnown RBP17.39■□□□□ 0.37
snR78snR78 BFR2Q06631 534 aaKnown RBP17.13■□□□□ 0.33
snR78snR78 AVT3P36062 692 aa17.11■□□□□ 0.33
snR78snR78 RSE1Q04693 1361 aaKnown RBP16.98■□□□□ 0.31
snR78snR78 TSR3Q12094 313 aaKnown RBP16.78■□□□□ 0.28
snR78snR78 HAA1Q12753 694 aaKnown RBP16.51■□□□□ 0.23
snR78snR78 YCK3P39962 524 aa16.49■□□□□ 0.23
snR78snR78 RPL17AP05740 184 aaKnown RBP16.41■□□□□ 0.22
snR78snR78 RPL17BP46990 184 aaKnown RBP16.41■□□□□ 0.22
snR78snR78 REB1P21538 810 aa16.33■□□□□ 0.2
snR78snR78 MRPL32P25348 183 aa16.16■□□□□ 0.18
snR78snR78 SPT21P35209 758 aa15.66■□□□□ 0.1
snR78snR78 YKR023WP36119 530 aaKnown RBP15.42■□□□□ 0.06
snR78snR78 YGL015CP33199 130 aa15.37■□□□□ 0.05
snR78snR78 CDC27P38042 758 aa15.36■□□□□ 0.05
snR78snR78 TFA1P36100 482 aa15.34■□□□□ 0.05
snR78snR78 RIM101P33400 625 aa15.24■□□□□ 0.03
snR78snR78 HOP09932 586 aa15.14■□□□□ 0.01
snR78snR78 TFC8Q12308 588 aa15.12■□□□□ 0.01
snR78snR78 DCD1P06773 312 aa15.05■□□□□ -0
snR78snR78 UBP10P53874 792 aaPredicted RBP14.88□□□□□ -0.03
snR78snR78 MAP2P38174 421 aaKnown RBP14.85□□□□□ -0.03
snR78snR78 OXP1P28273 1286 aa14.74□□□□□ -0.05
snR78snR78 BCH2P36122 765 aa14.65□□□□□ -0.06
snR78snR78 SCY1P53009 804 aa14.65□□□□□ -0.06
snR78snR78 YIL055CP40523 627 aaKnown RBP14.62□□□□□ -0.07
snR78snR78 PTP3P40048 928 aa14.57□□□□□ -0.08
snR78snR78 SLX5P32828 619 aaKnown RBP14.44□□□□□ -0.1
snR78snR78 YAH1Q12184 172 aaKnown RBP14.43□□□□□ -0.1
snR78snR78 RSM7P47150 247 aa14.35□□□□□ -0.11
snR78snR78 EPS1P40557 701 aa14.33□□□□□ -0.12
snR78snR78 TIF4632P39936 914 aaKnown RBP14.32□□□□□ -0.12
snR78snR78 BDF1P35817 686 aa14.24□□□□□ -0.13
snR78snR78 TGL3P40308 642 aa14.21□□□□□ -0.13
snR78snR78 BBC1P47068 1157 aa14.19□□□□□ -0.14
snR78snR78 AI2P03876 854 aa14.18□□□□□ -0.14
snR78snR78 YLR271WQ06152 274 aa14.16□□□□□ -0.14
snR78snR78 SSP1P38871 571 aa14.12□□□□□ -0.15
snR78snR78 ARP8Q12386 881 aaKnown RBP RIP-Chip data14.03□□□□□ -0.16not detected
snR78snR78 PSD2P53037 1138 aaKnown RBP13.88□□□□□ -0.19
snR78snR78 BUD31P25337 157 aaPredicted RBP13.85□□□□□ -0.19
snR78snR78 MGA2P40578 1113 aa13.73□□□□□ -0.21
snR78snR78 MRM1P25270 412 aa13.7□□□□□ -0.22
snR78snR78 UBP9P39967 754 aa13.7□□□□□ -0.22
snR78snR78 YOR238WQ08634 303 aa13.69□□□□□ -0.22
snR78snR78 CST9Q06032 482 aa13.68□□□□□ -0.22
snR78snR78 NSR1P27476 414 aaKnown RBP RIP-Chip data13.67□□□□□ -0.22not detected
snR78snR78 YAP5P40574 245 aa13.65□□□□□ -0.22
snR78snR78 MST1P07236 462 aa13.62□□□□□ -0.23
snR78snR78 RTG3P38165 486 aa13.44□□□□□ -0.26
snR78snR78 PIB1Q06651 286 aa13.39□□□□□ -0.27
snR78snR78 YBL029C-AQ3E756 94 aa13.37□□□□□ -0.27
snR78snR78 GTT3P39996 337 aa13.36□□□□□ -0.27
snR78snR78 VPS29P38759 282 aa13.35□□□□□ -0.27
snR78snR78 YMR1P47147 688 aaKnown RBP RIP-Chip data13.34□□□□□ -0.27not detected
snR78snR78 RCR1P38212 213 aa13.3□□□□□ -0.28
snR78snR78 SIS1P25294 352 aaKnown RBP13.29□□□□□ -0.28
snR78snR78 WSC3Q12215 556 aa13.29□□□□□ -0.28
snR78snR78 DBP1P24784 617 aaKnown RBP13.28□□□□□ -0.28
snR78snR78 VNX1P42839 908 aa13.26□□□□□ -0.29
snR78snR78 YFR006WP43590 535 aa13.23□□□□□ -0.29
snR78snR78 STS1P38637 319 aa13.19□□□□□ -0.3
snR78snR78 SPP1Q03012 353 aa13.18□□□□□ -0.3
snR78snR78 VMA1P17255 1071 aaKnown RBP13.07□□□□□ -0.32
snR78snR78 TIF11P38912 153 aaKnown RBP13.07□□□□□ -0.32
snR78snR78 RAM2P29703 316 aa13.03□□□□□ -0.32
snR78snR78 MSB4Q12317 492 aa13.01□□□□□ -0.33
snR78snR78 SET4P42948 560 aa12.99□□□□□ -0.33
snR78snR78 YOL036WQ08206 761 aa12.99□□□□□ -0.33
snR78snR78 ULI1P43604 169 aa12.98□□□□□ -0.33
snR78snR78 SAM3Q08986 587 aa12.96□□□□□ -0.33
snR78snR78 MAK11P20484 414 aaKnown RBP12.95□□□□□ -0.34
snR78snR78 EAP1P36041 632 aaKnown RBP12.94□□□□□ -0.34
snR78snR78 MIF2P35201 549 aa12.87□□□□□ -0.35
snR78snR78 IOC2Q12072 812 aa12.87□□□□□ -0.35
snR78snR78 LDB19Q12502 818 aa12.86□□□□□ -0.35
snR78snR78 GYP5Q12344 894 aa12.84□□□□□ -0.35
snR78snR78 TRP5P00931 707 aaKnown RBP12.83□□□□□ -0.36
snR78snR78 ABP1P15891 592 aaKnown RBP12.77□□□□□ -0.37
snR78snR78 COQ8P27697 501 aa12.77□□□□□ -0.37
snR78snR78 FKH1P40466 484 aa12.77□□□□□ -0.37
snR78snR78 DCW1P36091 449 aa12.75□□□□□ -0.37
snR78snR78 EDS1P38073 919 aa12.75□□□□□ -0.37
snR78snR78 AIR2Q12476 344 aaKnown RBP12.75□□□□□ -0.37
snR78snR78 GRE2Q12068 342 aaKnown RBP12.73□□□□□ -0.37
snR78snR78 PTC3P34221 468 aaKnown RBP12.72□□□□□ -0.37
snR78snR78 RTG1P32607 177 aa12.71□□□□□ -0.37
snR78snR78 HTA1P04911 132 aaKnown RBP12.7□□□□□ -0.38
snR78snR78 HTA2P04912 132 aa12.7□□□□□ -0.38
snR78snR78 YJL171CP46992 396 aa12.69□□□□□ -0.38
snR78snR78 YNL035CP53962 389 aaKnown RBP12.68□□□□□ -0.38
snR78snR78 ATH1P48016 1211 aa12.67□□□□□ -0.38
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms