RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W THS1P04801 734 aaKnown RBP4.48□□□□□ -1.69
ROD1YOR018W MBR1P23493 339 aa4.48□□□□□ -1.69
ROD1YOR018W MPC54Q08550 464 aa4.48□□□□□ -1.69
ROD1YOR018W MMP1Q12372 583 aa4.48□□□□□ -1.69
ROD1YOR018W PIF1P07271 859 aa4.48□□□□□ -1.69
ROD1YOR018W SSA1P10591 642 aaKnown RBP4.48□□□□□ -1.69
ROD1YOR018W HPR1P17629 752 aaKnown RBP4.48□□□□□ -1.69
ROD1YOR018W UTP7P40055 554 aaKnown RBP4.48□□□□□ -1.69
ROD1YOR018W FET4P40988 552 aa4.48□□□□□ -1.69
ROD1YOR018W ATG20Q07528 640 aa4.48□□□□□ -1.69
ROD1YOR018W RRG1Q12167 365 aaPredicted RBP4.48□□□□□ -1.69
ROD1YOR018W TAH18Q12181 623 aa4.48□□□□□ -1.69
ROD1YOR018W GRX6Q12438 231 aa4.48□□□□□ -1.69
ROD1YOR018W HKR1P41809 1802 aa4.48□□□□□ -1.69
ROD1YOR018W TTI1P36097 1038 aa4.47□□□□□ -1.69
ROD1YOR018W SHC1P39000 512 aa4.47□□□□□ -1.69
ROD1YOR018W CTF18P49956 741 aa4.47□□□□□ -1.69
ROD1YOR018W ESF1Q06344 628 aaKnown RBP4.47□□□□□ -1.69
ROD1YOR018W YDJ1P25491 409 aaKnown RBP4.47□□□□□ -1.69
ROD1YOR018W RER2P35196 286 aa4.47□□□□□ -1.69
ROD1YOR018W MET1P36150 593 aa4.47□□□□□ -1.69
ROD1YOR018W GEF1P37020 779 aa4.47□□□□□ -1.69
ROD1YOR018W CSM2P40465 213 aa4.47□□□□□ -1.69
ROD1YOR018W YNL108CP53929 270 aa4.47□□□□□ -1.69
ROD1YOR018W UFD2P54860 961 aa4.47□□□□□ -1.69
ROD1YOR018W HCA4P20448 770 aaKnown RBP4.46□□□□□ -1.69
ROD1YOR018W OPI1P21957 404 aa4.46□□□□□ -1.69
ROD1YOR018W PEP3P27801 918 aa4.46□□□□□ -1.69
ROD1YOR018W EAP1P36041 632 aaKnown RBP4.46□□□□□ -1.69
ROD1YOR018W VID27P40157 782 aa4.46□□□□□ -1.69
ROD1YOR018W YJL171CP46992 396 aa4.46□□□□□ -1.69
ROD1YOR018W JIP4Q03361 876 aa4.46□□□□□ -1.69
ROD1YOR018W YML020WQ03722 664 aa4.46□□□□□ -1.69
ROD1YOR018W MRX10Q05648 414 aa4.46□□□□□ -1.69
ROD1YOR018W VPS1P21576 704 aaKnown RBP4.46□□□□□ -1.7
ROD1YOR018W YBL036CP38197 257 aa4.46□□□□□ -1.7
ROD1YOR018W ARP5P53946 755 aa4.46□□□□□ -1.7
ROD1YOR018W SEN54Q02825 467 aaPredicted RBP4.46□□□□□ -1.7
ROD1YOR018W ERF2Q06551 359 aa4.46□□□□□ -1.7
ROD1YOR018W ENO2P00925 437 aaKnown RBP4.45□□□□□ -1.7
ROD1YOR018W KRS1P15180 591 aaKnown RBP4.45□□□□□ -1.7
ROD1YOR018W CHS3P29465 1165 aa4.45□□□□□ -1.7
ROD1YOR018W PNT1P38969 423 aa4.45□□□□□ -1.7
ROD1YOR018W SLN1P39928 1220 aaPredicted RBP4.45□□□□□ -1.7
ROD1YOR018W APL6P46682 809 aa4.45□□□□□ -1.7
ROD1YOR018W RPS15Q01855 142 aaKnown RBP4.45□□□□□ -1.7
ROD1YOR018W ECM23Q02710 187 aa4.45□□□□□ -1.7
ROD1YOR018W PML39Q03760 334 aa4.45□□□□□ -1.7
ROD1YOR018W YDR344CQ05510 147 aa4.45□□□□□ -1.7
ROD1YOR018W MRD1Q06106 887 aaKnown RBP4.45□□□□□ -1.7
ROD1YOR018W PUS5Q06244 254 aa4.45□□□□□ -1.7
ROD1YOR018W TFC6Q06339 672 aa4.45□□□□□ -1.7
ROD1YOR018W KEL3Q08979 651 aaPredicted RBP4.45□□□□□ -1.7
ROD1YOR018W CYB2P00175 591 aa4.45□□□□□ -1.7
ROD1YOR018W RIT1P23796 513 aa4.45□□□□□ -1.7
ROD1YOR018W FBP26P32604 452 aa4.45□□□□□ -1.7
ROD1YOR018W RTG2P32608 588 aaKnown RBP4.45□□□□□ -1.7
ROD1YOR018W MYO3P36006 1272 aa4.45□□□□□ -1.7
ROD1YOR018W KEL1P38853 1164 aaKnown RBP4.45□□□□□ -1.7
ROD1YOR018W AKR1P39010 764 aa4.45□□□□□ -1.7
ROD1YOR018W PIP2P52960 996 aa4.45□□□□□ -1.7
ROD1YOR018W YOR111WQ99210 232 aa4.45□□□□□ -1.7
ROD1YOR018W TUB2P02557 457 aaKnown RBP4.44□□□□□ -1.7
ROD1YOR018W CPA2P03965 1118 aaKnown RBP4.44□□□□□ -1.7
ROD1YOR018W CBP1P07252 654 aa4.44□□□□□ -1.7
ROD1YOR018W RNR2P09938 399 aaKnown RBP4.44□□□□□ -1.7
ROD1YOR018W MSM1P22438 575 aa4.44□□□□□ -1.7
ROD1YOR018W ANP1P32629 500 aa4.44□□□□□ -1.7
ROD1YOR018W OSH3P38713 996 aaKnown RBP4.44□□□□□ -1.7
ROD1YOR018W TIF11P38912 153 aaKnown RBP4.44□□□□□ -1.7
ROD1YOR018W RRP8P38961 392 aaKnown RBP4.44□□□□□ -1.7
ROD1YOR018W IOC3P43596 787 aa4.44□□□□□ -1.7
ROD1YOR018W RIM21P48565 533 aa4.44□□□□□ -1.7
ROD1YOR018W YGR117CP53270 476 aa4.44□□□□□ -1.7
ROD1YOR018W HRQ1Q05549 1077 aa4.44□□□□□ -1.7
ROD1YOR018W SUE1Q06524 206 aa4.44□□□□□ -1.7
ROD1YOR018W YLR278CQ05854 1341 aa4.44□□□□□ -1.7
ROD1YOR018W MAK16P10962 306 aaPredicted RBP4.44□□□□□ -1.7
ROD1YOR018W SAM2P19358 384 aaKnown RBP4.44□□□□□ -1.7
ROD1YOR018W RDS2P19541 446 aaKnown RBP4.44□□□□□ -1.7
ROD1YOR018W SKI2P35207 1287 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
ROD1YOR018W ULI1P43604 169 aa4.44□□□□□ -1.7
ROD1YOR018W YPL260WQ08977 551 aa4.44□□□□□ -1.7
ROD1YOR018W CDC6P09119 513 aa4.43□□□□□ -1.7
ROD1YOR018W PUP1P25043 261 aa4.43□□□□□ -1.7
ROD1YOR018W ADP1P25371 1049 aa4.43□□□□□ -1.7
ROD1YOR018W NDT80P38830 627 aa4.43□□□□□ -1.7
ROD1YOR018W PEX29Q03370 554 aa4.43□□□□□ -1.7
ROD1YOR018W UBX2Q04228 584 aa4.43□□□□□ -1.7
ROD1YOR018W AGE1Q04412 482 aa4.43□□□□□ -1.7
ROD1YOR018W EST2Q06163 884 aa4.43□□□□□ -1.7
ROD1YOR018W SPN1Q06505 410 aaPredicted RBP4.43□□□□□ -1.7
ROD1YOR018W YRR1Q12172 810 aa4.43□□□□□ -1.7
ROD1YOR018W ENO1P00924 437 aaKnown RBP4.43□□□□□ -1.7
ROD1YOR018W RPL19AP0CX82 189 aaKnown RBP4.43□□□□□ -1.7
ROD1YOR018W RPL19BP0CX83 189 aaPredicted RBP4.43□□□□□ -1.7
ROD1YOR018W STI1P15705 589 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
ROD1YOR018W CRG1P38892 291 aaRIP-Chip data4.43□□□□□ -1.7not detected
ROD1YOR018W RTS1P38903 757 aa4.43□□□□□ -1.7
ROD1YOR018W SLX8P40072 274 aa4.43□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 106 ms