RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeastyeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC39YLR440C LAM5P43560 674 aa5.56□□□□□ -1.52
SEC39YLR440C SHE4P51534 789 aa5.56□□□□□ -1.52
SEC39YLR440C EFM5P53200 248 aaKnown RBP5.56□□□□□ -1.52
SEC39YLR440C RSM28Q03430 361 aa5.56□□□□□ -1.52
SEC39YLR440C MSH6Q03834 1242 aa5.56□□□□□ -1.52
SEC39YLR440C YMR074CQ04773 145 aa5.56□□□□□ -1.52
SEC39YLR440C YLR352WQ06479 807 aa5.56□□□□□ -1.52
SEC39YLR440C YOR352WQ08816 343 aa5.56□□□□□ -1.52
SEC39YLR440C YPL191CQ08930 360 aa5.56□□□□□ -1.52
SEC39YLR440C RTP1Q12751 981 aa5.56□□□□□ -1.52
SEC39YLR440C YIL002W-AQ3E7Z5 69 aa5.56□□□□□ -1.52
SEC39YLR440C RAD9P14737 1309 aa5.56□□□□□ -1.52
SEC39YLR440C NUP192P47054 1683 aa5.56□□□□□ -1.52
SEC39YLR440C PRT1P06103 763 aaKnown RBP5.56□□□□□ -1.52
SEC39YLR440C TPM1P17536 199 aaKnown RBP5.56□□□□□ -1.52
SEC39YLR440C DPH5P32469 300 aaPredicted RBP5.56□□□□□ -1.52
SEC39YLR440C UBP13P38187 747 aa5.56□□□□□ -1.52
SEC39YLR440C ATG14P38270 344 aa5.56□□□□□ -1.52
SEC39YLR440C MED8P38304 223 aa5.56□□□□□ -1.52
SEC39YLR440C FTR1P40088 404 aa5.56□□□□□ -1.52
SEC39YLR440C MSN5P52918 1224 aa5.56□□□□□ -1.52
SEC39YLR440C SHE10P53075 577 aa5.56□□□□□ -1.52
SEC39YLR440C RSC1P53236 928 aa5.56□□□□□ -1.52
SEC39YLR440C RPN4Q03465 531 aa5.56□□□□□ -1.52
SEC39YLR440C SSQ1Q05931 657 aaPredicted RBP5.56□□□□□ -1.52
SEC39YLR440C VIP1Q06685 1146 aaKnown RBP5.56□□□□□ -1.52
SEC39YLR440C NOC3Q07896 663 aaPredicted RBP5.56□□□□□ -1.52
SEC39YLR440C TY3B-IQ7LHG5 1498 aaKnown RBP5.55□□□□□ -1.52
SEC39YLR440C PMS1P14242 873 aa5.55□□□□□ -1.52
SEC39YLR440C TPD3P31383 635 aa5.55□□□□□ -1.52
SEC39YLR440C GUA1P38625 525 aaKnown RBP5.55□□□□□ -1.52
SEC39YLR440C PEX18P38855 283 aa5.55□□□□□ -1.52
SEC39YLR440C RIC1P40395 1056 aa5.55□□□□□ -1.52
SEC39YLR440C RTC4P53850 401 aa5.55□□□□□ -1.52
SEC39YLR440C RPL34AP87262 121 aaPredicted RBP5.55□□□□□ -1.52
SEC39YLR440C ARR2Q06597 130 aa5.55□□□□□ -1.52
SEC39YLR440C SWA2Q06677 668 aa5.55□□□□□ -1.52
SEC39YLR440C ENV9Q08651 330 aa5.55□□□□□ -1.52
SEC39YLR440C DPH6Q12429 685 aa5.55□□□□□ -1.52
SEC39YLR440C RRP36Q12481 300 aaPredicted RBP5.55□□□□□ -1.52
SEC39YLR440C PET494P07390 489 aaPredicted RBP5.54□□□□□ -1.52
SEC39YLR440C SEC15P22224 910 aa5.54□□□□□ -1.52
SEC39YLR440C RRN3P36070 627 aa5.54□□□□□ -1.52
SEC39YLR440C CCL1P37366 393 aa5.54□□□□□ -1.52
SEC39YLR440C TBS1P38114 1094 aa5.54□□□□□ -1.52
SEC39YLR440C HOL1P53389 586 aa5.54□□□□□ -1.52
SEC39YLR440C ZDS2P54786 942 aa5.54□□□□□ -1.52
SEC39YLR440C SPO19Q03029 223 aa5.54□□□□□ -1.52
SEC39YLR440C VPS20Q04272 221 aa5.54□□□□□ -1.52
SEC39YLR440C INH1P01097 85 aa5.54□□□□□ -1.52
SEC39YLR440C RPB2P08518 1224 aaKnown RBP5.54□□□□□ -1.52
SEC39YLR440C CIT2P08679 460 aa5.54□□□□□ -1.52
SEC39YLR440C STO1P34160 861 aaKnown RBP5.54□□□□□ -1.52
SEC39YLR440C YKL100CP34248 587 aa5.54□□□□□ -1.52
SEC39YLR440C UBP14P38237 781 aaKnown RBP5.54□□□□□ -1.52
SEC39YLR440C SEC26P41810 973 aaKnown RBP5.54□□□□□ -1.52
SEC39YLR440C GCD10P41814 478 aa5.54□□□□□ -1.52
SEC39YLR440C ADE12P80210 433 aaKnown RBP5.54□□□□□ -1.52
SEC39YLR440C TFB3Q03290 321 aa5.54□□□□□ -1.52
SEC39YLR440C RRN11Q04712 507 aa5.54□□□□□ -1.52
SEC39YLR440C AIM7Q12156 149 aa5.54□□□□□ -1.52
SEC39YLR440C RRI2Q12348 645 aa5.54□□□□□ -1.52
SEC39YLR440C YBL111CQ3E7Y5 667 aa5.54□□□□□ -1.52
SEC39YLR440C RAD3P06839 778 aa5.53□□□□□ -1.52
SEC39YLR440C RED1P14291 827 aa5.53□□□□□ -1.52
SEC39YLR440C STE11P23561 717 aa5.53□□□□□ -1.52
SEC39YLR440C YAP1801P38856 637 aa5.53□□□□□ -1.52
SEC39YLR440C SHC1P39000 512 aa5.53□□□□□ -1.52
SEC39YLR440C SNF7P39929 240 aaKnown RBP5.53□□□□□ -1.52
SEC39YLR440C MET18P40469 1032 aa5.53□□□□□ -1.52
SEC39YLR440C ATP22P50273 684 aaPredicted RBP5.53□□□□□ -1.52
SEC39YLR440C YGR021WP53212 290 aa5.53□□□□□ -1.52
SEC39YLR440C AOS1Q06624 347 aa5.53□□□□□ -1.52
SEC39YLR440C YPR097WQ06839 1073 aa5.53□□□□□ -1.52
SEC39YLR440C RRF1P38771 230 aa5.53□□□□□ -1.52
SEC39YLR440C CIC1P38779 376 aaKnown RBP5.53□□□□□ -1.52
SEC39YLR440C ECM1P39715 212 aa5.53□□□□□ -1.52
SEC39YLR440C VID27P40157 782 aa5.53□□□□□ -1.52
SEC39YLR440C NDC80P40460 691 aa5.53□□□□□ -1.52
SEC39YLR440C DAS1P47005 663 aa5.53□□□□□ -1.52
SEC39YLR440C ATG16Q03818 150 aa5.53□□□□□ -1.52
SEC39YLR440C WHI5Q12416 295 aa5.53□□□□□ -1.52
SEC39YLR440C RTC1Q08281 1341 aa5.53□□□□□ -1.52
SEC39YLR440C PGS1P25578 521 aa5.52□□□□□ -1.53
SEC39YLR440C POL4P25615 582 aa5.52□□□□□ -1.53
SEC39YLR440C SRP40P32583 406 aaPredicted RBP5.52□□□□□ -1.53
SEC39YLR440C YBL028CP38202 106 aa5.52□□□□□ -1.53
SEC39YLR440C SUM1P46676 1062 aa5.52□□□□□ -1.53
SEC39YLR440C SRB7P47822 140 aa5.52□□□□□ -1.53
SEC39YLR440C LAP3Q01532 483 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
SEC39YLR440C NNT1Q05874 261 aa5.52□□□□□ -1.53
SEC39YLR440C MPH2P0CD99 609 aa5.51□□□□□ -1.53
SEC39YLR440C SEN2P16658 377 aa5.51□□□□□ -1.53
SEC39YLR440C DAL80P26343 269 aa5.51□□□□□ -1.53
SEC39YLR440C SWC3P31376 625 aa5.51□□□□□ -1.53
SEC39YLR440C BIO2P32451 375 aa5.51□□□□□ -1.53
SEC39YLR440C NUF2P33895 451 aa5.51□□□□□ -1.53
SEC39YLR440C TIF5P38431 405 aaKnown RBP5.51□□□□□ -1.53
SEC39YLR440C TOM71P38825 639 aaKnown RBP5.51□□□□□ -1.53
SEC39YLR440C YMR111CQ04461 462 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms