RNA–Protein interactions for RNA: YLR114C

AVL9, Transcript of Conserved protein involved in exocytic transport from the Golgi, yeastyeast

Gene AVL9, Length 2,295 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVL9YLR114C ALF1P53904 254 aa8.45□□□□□ -1.06
AVL9YLR114C EIS1Q05050 843 aaKnown RBP8.45□□□□□ -1.06
AVL9YLR114C CEX1Q12453 761 aa8.45□□□□□ -1.06
AVL9YLR114C LCB1P25045 558 aaKnown RBP8.44□□□□□ -1.06
AVL9YLR114C PTK1P36002 662 aaPredicted RBP8.44□□□□□ -1.06
AVL9YLR114C BDF2Q07442 638 aa8.44□□□□□ -1.06
AVL9YLR114C YOR111WQ99210 232 aa8.44□□□□□ -1.06
AVL9YLR114C PET123P17558 318 aa8.43□□□□□ -1.06
AVL9YLR114C RNR3P21672 869 aaKnown RBP8.43□□□□□ -1.06
AVL9YLR114C YHL050CP38721 697 aa8.43□□□□□ -1.06
AVL9YLR114C MGA2P40578 1113 aa8.43□□□□□ -1.06
AVL9YLR114C ALG2P43636 503 aa8.43□□□□□ -1.06
AVL9YLR114C PRP31P49704 494 aaPredicted RBP8.43□□□□□ -1.06
AVL9YLR114C IRC4Q03036 179 aa8.43□□□□□ -1.06
AVL9YLR114C MRD1Q06106 887 aaKnown RBP8.43□□□□□ -1.06
AVL9YLR114C NBL1Q3E7Y6 73 aa8.43□□□□□ -1.06
AVL9YLR114C MSH3P25336 1018 aa8.43□□□□□ -1.06
AVL9YLR114C RPT3P33298 428 aaKnown RBP8.43□□□□□ -1.06
AVL9YLR114C RTT107P38850 1070 aa8.43□□□□□ -1.06
AVL9YLR114C LYS14P40971 790 aa8.43□□□□□ -1.06
AVL9YLR114C RPT4P53549 437 aaKnown RBP8.43□□□□□ -1.06
AVL9YLR114C MYO5Q04439 1219 aaKnown RBP8.43□□□□□ -1.06
AVL9YLR114C FIG2P25653 1609 aa8.43□□□□□ -1.06
AVL9YLR114C KRE2P27809 442 aa8.42□□□□□ -1.06
AVL9YLR114C APT1P49435 187 aaKnown RBP8.42□□□□□ -1.06
AVL9YLR114C ALG1P16661 449 aa8.42□□□□□ -1.06
AVL9YLR114C RRP43P25359 394 aaPredicted RBP8.42□□□□□ -1.06
AVL9YLR114C HIR1P32479 840 aa8.42□□□□□ -1.06
AVL9YLR114C FRD1P32614 470 aaKnown RBP8.42□□□□□ -1.06
AVL9YLR114C CAJ1P39101 391 aa8.42□□□□□ -1.06
AVL9YLR114C CSM2P40465 213 aa8.42□□□□□ -1.06
AVL9YLR114C DAK2P43550 591 aa8.42□□□□□ -1.06
AVL9YLR114C YFR006WP43590 535 aa8.42□□□□□ -1.06
AVL9YLR114C YFH7P43591 353 aa8.42□□□□□ -1.06
AVL9YLR114C YGR237CP50089 785 aa8.42□□□□□ -1.06
AVL9YLR114C CAF130P53280 1122 aaPredicted RBP8.42□□□□□ -1.06
AVL9YLR114C VPS38Q05919 439 aa8.42□□□□□ -1.06
AVL9YLR114C MCM16Q12262 181 aa8.42□□□□□ -1.06
AVL9YLR114C UBC1P21734 215 aaKnown RBP8.41□□□□□ -1.06
AVL9YLR114C YET1P35723 206 aa8.41□□□□□ -1.06
AVL9YLR114C SHM1P37292 490 aaPredicted RBP8.41□□□□□ -1.06
AVL9YLR114C BCD1P38772 366 aa8.41□□□□□ -1.06
AVL9YLR114C CCC2P38995 1004 aa8.41□□□□□ -1.06
AVL9YLR114C NAF1P53919 492 aaKnown RBP8.41□□□□□ -1.06
AVL9YLR114C TOS4Q06266 489 aa8.41□□□□□ -1.06
AVL9YLR114C YOR296WQ08748 1289 aa8.41□□□□□ -1.06
AVL9YLR114C HIS4P00815 799 aaKnown RBP8.41□□□□□ -1.06
AVL9YLR114C MET6P05694 767 aaKnown RBP8.41□□□□□ -1.06
AVL9YLR114C RIT1P23796 513 aa8.41□□□□□ -1.06
AVL9YLR114C STO1P34160 861 aaKnown RBP8.41□□□□□ -1.06
AVL9YLR114C YGL138CP53122 345 aa8.41□□□□□ -1.06
AVL9YLR114C RTC4P53850 401 aa8.41□□□□□ -1.06
AVL9YLR114C NOP14Q99207 810 aaKnown RBP8.41□□□□□ -1.06
AVL9YLR114C CDC37P06101 506 aaKnown RBP8.4□□□□□ -1.06
AVL9YLR114C SNF3P10870 884 aa8.4□□□□□ -1.06
AVL9YLR114C SEC65P29478 273 aa8.4□□□□□ -1.06
AVL9YLR114C EFM2P38347 419 aa8.4□□□□□ -1.06
AVL9YLR114C CTM1P38818 585 aa8.4□□□□□ -1.06
AVL9YLR114C ATG9Q12142 997 aa8.4□□□□□ -1.06
AVL9YLR114C TIP41Q12199 356 aa8.4□□□□□ -1.06
AVL9YLR114C RPS6AP0CX37 236 aaKnown RBP8.4□□□□□ -1.07
AVL9YLR114C RPS6BP0CX38 236 aaPredicted RBP8.4□□□□□ -1.07
AVL9YLR114C MDL2P33311 773 aa8.4□□□□□ -1.07
AVL9YLR114C RRP1P35178 278 aaPredicted RBP8.4□□□□□ -1.07
AVL9YLR114C BDF1P35817 686 aa8.4□□□□□ -1.07
AVL9YLR114C RAD26P40352 1085 aa8.4□□□□□ -1.07
AVL9YLR114C FYV8P46949 817 aaKnown RBP8.4□□□□□ -1.07
AVL9YLR114C EBS1Q03466 884 aaKnown RBP8.4□□□□□ -1.07
AVL9YLR114C RIX7Q07844 837 aaKnown RBP8.4□□□□□ -1.07
AVL9YLR114C PSF3Q12146 194 aa8.4□□□□□ -1.07
AVL9YLR114C RAD61Q99359 647 aa8.4□□□□□ -1.07
AVL9YLR114C SPO11P23179 398 aa8.39□□□□□ -1.07
AVL9YLR114C DPB3P27344 201 aa8.39□□□□□ -1.07
AVL9YLR114C PRO3P32263 286 aaKnown RBP8.39□□□□□ -1.07
AVL9YLR114C YDR341CQ05506 607 aaKnown RBP8.39□□□□□ -1.07
AVL9YLR114C UTP13Q05946 817 aaKnown RBP8.39□□□□□ -1.07
AVL9YLR114C YKL068W-AQ3E826 78 aa8.39□□□□□ -1.07
AVL9YLR114C REI1P38344 393 aaPredicted RBP8.38□□□□□ -1.07
AVL9YLR114C VID27P40157 782 aa8.38□□□□□ -1.07
AVL9YLR114C SEC9P40357 651 aa8.38□□□□□ -1.07
AVL9YLR114C NDC80P40460 691 aa8.38□□□□□ -1.07
AVL9YLR114C MAL13P53338 473 aa8.38□□□□□ -1.07
AVL9YLR114C RPT6Q01939 405 aaKnown RBP8.38□□□□□ -1.07
AVL9YLR114C SAS4Q04003 481 aa8.38□□□□□ -1.07
AVL9YLR114C RBA50Q04418 439 aa8.38□□□□□ -1.07
AVL9YLR114C HMI1Q12039 706 aa8.38□□□□□ -1.07
AVL9YLR114C SEC23P15303 768 aaKnown RBP8.38□□□□□ -1.07
AVL9YLR114C SIT4P20604 311 aa8.38□□□□□ -1.07
AVL9YLR114C YEL043WP32618 956 aa8.38□□□□□ -1.07
AVL9YLR114C SPT8P38915 602 aa8.38□□□□□ -1.07
AVL9YLR114C AIP1P46680 615 aaKnown RBP8.38□□□□□ -1.07
AVL9YLR114C PIP2P52960 996 aa8.38□□□□□ -1.07
AVL9YLR114C BOP3P53958 396 aa8.38□□□□□ -1.07
AVL9YLR114C PSR2Q07949 397 aa8.38□□□□□ -1.07
AVL9YLR114C YPL260WQ08977 551 aa8.38□□□□□ -1.07
AVL9YLR114C CAF20P12962 161 aaKnown RBP8.37□□□□□ -1.07
AVL9YLR114C TOS1P38288 455 aa8.37□□□□□ -1.07
AVL9YLR114C LSC2P53312 427 aa8.37□□□□□ -1.07
AVL9YLR114C ERG5P54781 538 aa8.37□□□□□ -1.07
AVL9YLR114C GIS4Q04233 774 aa8.37□□□□□ -1.07
Retrieved 100 of 5,963 RNA–protein pairs in 58.1 ms